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PMC:7253482 / 11710-11969 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
381 210-226 Chemical denotes N-linked glycans
384 115-119 Disease denotes MERS MESH:D018352
385 144-148 Disease denotes SARS MESH:D045169
386 232-236 Disease denotes MERS MESH:D018352
387 243-247 Disease denotes SARS MESH:D045169

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T71 167-180 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T72 250-258 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T42 144-148 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T43 243-247 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T67 113-114 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T68 135-137 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T69 142-143 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T70 164-166 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T71 230-231 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T72 241-242 http://purl.obolibrary.org/obo/CLO_0001021 denotes b

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T131 127-129 Chemical denotes ID http://purl.obolibrary.org/obo/CHEBI_141439
T132 156-158 Chemical denotes ID http://purl.obolibrary.org/obo/CHEBI_141439
T133 167-180 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T134 219-226 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T135 250-258 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T33108 0-3 DT denotes The
T5164 4-13 NN denotes modelling
T85081 14-16 IN denotes of
T78202 17-20 DT denotes the
T60050 21-35 RB denotes experimentally
T4820 36-44 VBN denotes observed
T14194 45-58 NN denotes glycosylation
T67945 59-61 VBZ denotes is
T60933 62-73 VBN denotes illustrated
T74928 74-76 IN denotes on
T84730 77-80 DT denotes the
T26156 81-90 NN denotes prefusion
T35915 91-100 NN denotes structure
T38149 101-103 IN denotes of
T82839 104-112 JJ denotes trimeric
T8210 113-114 DT denotes a
T24421 115-119 NN denotes MERS
T35489 120-121 NN denotes S
T78652 122-123 -LRB- denotes (
T68425 123-126 NN denotes PDB
T70607 127-129 NN denotes ID
T28784 130-134 NN denotes 5X59
T45890 134-135 -RRB- denotes )
T7560 135-141 CD denotes 11 and
T76185 142-143 NN denotes b
T79009 144-148 NNP denotes SARS
T30776 149-150 NNP denotes S
T73014 151-152 -LRB- denotes (
T68521 152-155 NN denotes PDB
T15706 156-158 NN denotes ID
T11708 159-163 NN denotes 5X58
T3010 163-164 -RRB- denotes )
T27583 164-198 JJ denotes 11 glycoproteins. Structural-based
T28741 199-206 NN denotes mapping
T83177 207-209 IN denotes of
T70681 210-218 JJ denotes N-linked
T92110 219-226 NNS denotes glycans
T35748 227-229 IN denotes on
T9158 230-231 DT denotes a
T59935 232-236 NN denotes MERS
T12304 237-240 CC denotes and
T82313 241-242 NN denotes b
T61347 243-247 NNP denotes SARS
T24930 248-249 NNP denotes S
T68640 250-258 NNS denotes proteins
R23985 T5164 T33108 arg1Of modelling,The
R42024 T5164 T85081 arg1Of modelling,of
R2979 T14194 T85081 arg2Of glycosylation,of
R71341 T14194 T78202 arg1Of glycosylation,the
R15611 T4820 T60050 arg1Of observed,experimentally
R91207 T14194 T4820 arg1Of glycosylation,observed
R91364 T5164 T67945 arg1Of modelling,is
R57657 T60933 T67945 arg2Of illustrated,is
R64641 T5164 T60933 arg2Of modelling,illustrated
R71202 T60933 T74928 arg1Of illustrated,on
R25467 T35915 T74928 arg2Of structure,on
R14182 T35915 T84730 arg1Of structure,the
R71520 T35915 T26156 arg1Of structure,prefusion
R60786 T35915 T38149 arg1Of structure,of
R11447 T28741 T38149 arg2Of mapping,of
R19445 T24421 T82839 arg1Of MERS,trimeric
R34175 T24421 T8210 arg1Of MERS,a
R25874 T76185 T24421 arg1Of b,MERS
R20473 T76185 T35489 arg1Of b,S
R94261 T35489 T78652 arg1Of S,(
R39195 T28784 T78652 arg2Of 5X59,(
R19115 T45890 T78652 arg3Of ),(
R34457 T28784 T68425 arg1Of 5X59,PDB
R12595 T28784 T70607 arg1Of 5X59,ID
R20784 T76185 T7560 arg1Of b,11 and
R30047 T28741 T76185 arg1Of mapping,b
R27001 T30776 T79009 arg1Of S,SARS
R7735 T28741 T30776 arg1Of mapping,S
R64829 T30776 T73014 arg1Of S,(
R80551 T11708 T73014 arg2Of 5X58,(
R94295 T3010 T73014 arg3Of ),(
R24335 T11708 T68521 arg1Of 5X58,PDB
R78811 T11708 T15706 arg1Of 5X58,ID
R15238 T28741 T27583 arg1Of mapping,11 glycoproteins. Structural-based
R13295 T28741 T83177 arg1Of mapping,of
R50333 T12304 T83177 arg2Of and,of
R59811 T92110 T70681 arg1Of glycans,N-linked
R18918 T92110 T35748 arg1Of glycans,on
R55957 T59935 T35748 arg2Of MERS,on
R59063 T59935 T9158 arg1Of MERS,a
R39844 T92110 T12304 arg1Of glycans,and
R44359 T68640 T12304 arg2Of proteins,and
R1966 T68640 T82313 arg1Of proteins,b
R38468 T24930 T61347 arg1Of S,SARS
R85546 T68640 T24930 arg1Of proteins,S

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T70 167-180 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T71 250-258 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T102 167-180 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T103 219-226 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T104 250-258 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T76 115-119 Species denotes MERS NCBItxid:1335626
T77 144-148 Species denotes SARS NCBItxid:694009
T78 232-236 Species denotes MERS NCBItxid:1335626
T79 243-247 Species denotes SARS NCBItxid:694009

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T70 0-259 Sentence denotes The modelling of the experimentally observed glycosylation is illustrated on the prefusion structure of trimeric a MERS S (PDB ID 5X59)11 and b SARS S (PDB ID 5X58)11 glycoproteins. Structural-based mapping of N-linked glycans on a MERS and b SARS S proteins.

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T37 144-148 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T38 243-247 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
384 115-119 Disease denotes MERS MESH:D018352
385 144-148 Disease denotes SARS MESH:D045169
381 210-226 Chemical denotes N-linked glycans
386 232-236 Disease denotes MERS MESH:D018352
387 243-247 Disease denotes SARS MESH:D045169

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T3398 167-180 Protein denotes glycoproteins https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8
T3483 248-258 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T31 45-58 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T28 45-58 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T32 45-58 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T70 0-259 Sentence denotes The modelling of the experimentally observed glycosylation is illustrated on the prefusion structure of trimeric a MERS S (PDB ID 5X59)11 and b SARS S (PDB ID 5X58)11 glycoproteins. Structural-based mapping of N-linked glycans on a MERS and b SARS S proteins.