PMC:7253482 / 1067-1316 JSONTXT

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    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"38","span":{"begin":12,"end":18},"obj":"Chemical"},{"id":"49","span":{"begin":238,"end":249},"obj":"Species"},{"id":"50","span":{"begin":174,"end":179},"obj":"Gene"},{"id":"51","span":{"begin":227,"end":234},"obj":"Chemical"}],"attributes":[{"id":"A38","pred":"tao:has_database_id","subj":"38","obj":"MESH:D011134"},{"id":"A49","pred":"tao:has_database_id","subj":"49","obj":"Tax:11118"},{"id":"A50","pred":"tao:has_database_id","subj":"50","obj":"Gene:43740568"},{"id":"A51","pred":"tao:has_database_id","subj":"51","obj":"MESH:D011134"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":" individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) proteins. Here Watanabe et al. report that glycans of coronavirus"}

    LitCovid-PD-FMA-UBERON

    {"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T7","span":{"begin":79,"end":86},"obj":"Body_part"},{"id":"T8","span":{"begin":184,"end":192},"obj":"Body_part"}],"attributes":[{"id":"A7","pred":"fma_id","subj":"T7","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A8","pred":"fma_id","subj":"T8","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":" individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) proteins. Here Watanabe et al. report that glycans of coronavirus"}

    LitCovid-PD-CLO

    {"project":"LitCovid-PD-CLO","denotations":[{"id":"T7","span":{"begin":117,"end":118},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":" individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) proteins. Here Watanabe et al. report that glycans of coronavirus"}

    LitCovid-PD-CHEBI

    {"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T6","span":{"begin":79,"end":86},"obj":"Chemical"},{"id":"T7","span":{"begin":184,"end":192},"obj":"Chemical"},{"id":"T8","span":{"begin":227,"end":234},"obj":"Chemical"}],"attributes":[{"id":"A6","pred":"chebi_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A7","pred":"chebi_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A8","pred":"chebi_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"}],"text":" individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) proteins. Here Watanabe et al. report that glycans of coronavirus"}

    LitCovid-sample-Enju

    {"project":"LitCovid-sample-Enju","denotations":[{"id":"T163","span":{"begin":1,"end":11},"obj":"JJ"},{"id":"T164","span":{"begin":12,"end":18},"obj":"NN"},{"id":"T165","span":{"begin":19,"end":31},"obj":"NNS"},{"id":"T166","span":{"begin":32,"end":35},"obj":"CC"},{"id":"T167","span":{"begin":36,"end":40},"obj":"RB"},{"id":"T168","span":{"begin":41,"end":44},"obj":"DT"},{"id":"T169","span":{"begin":45,"end":58},"obj":"JJ"},{"id":"T170","span":{"begin":59,"end":67},"obj":"NN"},{"id":"T171","span":{"begin":68,"end":74},"obj":"IN"},{"id":"T172","span":{"begin":75,"end":78},"obj":"DT"},{"id":"T173","span":{"begin":79,"end":86},"obj":"NN"},{"id":"T174","span":{"begin":87,"end":94},"obj":"NN"},{"id":"T175","span":{"begin":97,"end":110},"obj":"NN"},{"id":"T176","span":{"begin":111,"end":116},"obj":"VBZ"},{"id":"T177","span":{"begin":117,"end":118},"obj":"DT"},{"id":"T178","span":{"begin":119,"end":122},"obj":"JJ"},{"id":"T179","span":{"begin":123,"end":127},"obj":"NN"},{"id":"T180","span":{"begin":128,"end":130},"obj":"IN"},{"id":"T181","span":{"begin":131,"end":140},"obj":"NN"},{"id":"T182","span":{"begin":141,"end":143},"obj":"IN"},{"id":"T183","span":{"begin":144,"end":155},"obj":"JJ"},{"id":"T184","span":{"begin":156,"end":164},"obj":"NNS"},{"id":"T185","span":{"begin":165,"end":167},"obj":"IN"},{"id":"T186","span":{"begin":168,"end":173},"obj":"JJ"},{"id":"T187","span":{"begin":174,"end":179},"obj":"NN"},{"id":"T188","span":{"begin":180,"end":181},"obj":"-LRB-"},{"id":"T189","span":{"begin":181,"end":182},"obj":"NN"},{"id":"T190","span":{"begin":182,"end":183},"obj":"-RRB-"},{"id":"T191","span":{"begin":184,"end":192},"obj":"NNS"},{"id":"T192","span":{"begin":194,"end":198},"obj":"RB"},{"id":"T193","span":{"begin":199,"end":207},"obj":"NNP"},{"id":"T194","span":{"begin":208,"end":210},"obj":"FW"},{"id":"T195","span":{"begin":211,"end":214},"obj":"FW"},{"id":"T196","span":{"begin":215,"end":221},"obj":"NN"},{"id":"T197","span":{"begin":222,"end":226},"obj":"IN"},{"id":"T198","span":{"begin":227,"end":234},"obj":"NNS"},{"id":"T199","span":{"begin":235,"end":237},"obj":"IN"},{"id":"T200","span":{"begin":238,"end":249},"obj":"NN"}],"relations":[{"id":"R159","pred":"arg1Of","subj":"T165","obj":"T163"},{"id":"R160","pred":"arg1Of","subj":"T165","obj":"T164"},{"id":"R162","pred":"arg2Of","subj":"T170","obj":"T166"},{"id":"R163","pred":"arg1Of","subj":"T166","obj":"T167"},{"id":"R164","pred":"arg1Of","subj":"T170","obj":"T168"},{"id":"R165","pred":"arg1Of","subj":"T170","obj":"T169"},{"id":"R166","pred":"arg1Of","subj":"T170","obj":"T171"},{"id":"R167","pred":"arg2Of","subj":"T174","obj":"T171"},{"id":"R168","pred":"arg1Of","subj":"T174","obj":"T172"},{"id":"R169","pred":"arg1Of","subj":"T174","obj":"T173"},{"id":"R170","pred":"arg1Of","subj":"T175","obj":"T176"},{"id":"R171","pred":"arg2Of","subj":"T179","obj":"T176"},{"id":"R172","pred":"arg1Of","subj":"T179","obj":"T177"},{"id":"R173","pred":"arg1Of","subj":"T179","obj":"T178"},{"id":"R174","pred":"arg1Of","subj":"T176","obj":"T180"},{"id":"R175","pred":"arg2Of","subj":"T181","obj":"T180"},{"id":"R176","pred":"arg1Of","subj":"T181","obj":"T182"},{"id":"R177","pred":"arg2Of","subj":"T184","obj":"T182"},{"id":"R178","pred":"arg1Of","subj":"T184","obj":"T183"},{"id":"R179","pred":"arg1Of","subj":"T181","obj":"T185"},{"id":"R180","pred":"arg2Of","subj":"T191","obj":"T185"},{"id":"R181","pred":"arg1Of","subj":"T187","obj":"T186"},{"id":"R182","pred":"arg1Of","subj":"T191","obj":"T187"},{"id":"R183","pred":"arg1Of","subj":"T187","obj":"T188"},{"id":"R184","pred":"arg2Of","subj":"T189","obj":"T188"},{"id":"R185","pred":"arg3Of","subj":"T190","obj":"T188"},{"id":"R186","pred":"arg1Of","subj":"T196","obj":"T192"},{"id":"R187","pred":"arg1Of","subj":"T195","obj":"T193"},{"id":"R188","pred":"arg1Of","subj":"T195","obj":"T194"},{"id":"R189","pred":"arg1Of","subj":"T195","obj":"T196"},{"id":"R192","pred":"arg1Of","subj":"T198","obj":"T199"}],"text":" individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) proteins. Here Watanabe et al. report that glycans of coronavirus"}

    LitCovid-sample-PD-FMA

    {"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T7","span":{"begin":79,"end":86},"obj":"Body_part"},{"id":"T8","span":{"begin":184,"end":192},"obj":"Body_part"}],"attributes":[{"id":"A7","pred":"fma_id","subj":"T7","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A8","pred":"fma_id","subj":"T8","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":" individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) proteins. Here Watanabe et al. report that glycans of coronavirus"}

    LitCovid-sample-CHEBI

    {"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T6","span":{"begin":79,"end":86},"obj":"Chemical"},{"id":"T7","span":{"begin":184,"end":192},"obj":"Chemical"},{"id":"T8","span":{"begin":227,"end":234},"obj":"Chemical"}],"attributes":[{"id":"A6","pred":"chebi_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A7","pred":"chebi_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A8","pred":"chebi_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"}],"text":" individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) proteins. Here Watanabe et al. report that glycans of coronavirus"}

    LitCovid-sample-sentences

    {"project":"LitCovid-sample-sentences","denotations":[{"id":"T9","span":{"begin":97,"end":193},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":" individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) proteins. Here Watanabe et al. report that glycans of coronavirus"}

    LitCovid-sample-Pubtator

    {"project":"LitCovid-sample-Pubtator","denotations":[{"id":"38","span":{"begin":12,"end":18},"obj":"Chemical"},{"id":"50","span":{"begin":174,"end":179},"obj":"Gene"},{"id":"51","span":{"begin":227,"end":234},"obj":"Chemical"},{"id":"49","span":{"begin":238,"end":249},"obj":"Species"}],"attributes":[{"id":"A38","pred":"pubann:denotes","subj":"38","obj":"MESH:D011134"},{"id":"A50","pred":"pubann:denotes","subj":"50","obj":"Gene:43740568"},{"id":"A51","pred":"pubann:denotes","subj":"51","obj":"MESH:D011134"},{"id":"A49","pred":"pubann:denotes","subj":"49","obj":"Tax:11118"}],"text":" individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) proteins. Here Watanabe et al. report that glycans of coronavirus"}

    LitCovid-sample-UniProt

    {"project":"LitCovid-sample-UniProt","denotations":[{"id":"T648","span":{"begin":180,"end":192},"obj":"Protein"}],"attributes":[{"id":"A648","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q9UIP0"},{"id":"A649","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q9UIN9"},{"id":"A650","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q9UIN8"},{"id":"A651","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q9UIN7"},{"id":"A652","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q9UIN6"},{"id":"A653","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q9UBH8"},{"id":"A654","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q9NRH8"},{"id":"A655","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q9NRH7"},{"id":"A656","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q9NRH6"},{"id":"A657","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q9NRH5"},{"id":"A658","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q9NRH4"},{"id":"A659","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q9NPG5"},{"id":"A660","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q9NPE0"},{"id":"A661","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q9NP52"},{"id":"A662","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q95IF9"},{"id":"A663","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q8N5P3"},{"id":"A664","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q8IZU6"},{"id":"A665","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q8IZU5"},{"id":"A666","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q8IZU4"},{"id":"A667","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q86Z04"},{"id":"A668","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q7YR44"},{"id":"A669","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q7LA71"},{"id":"A670","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q7LA70"},{"id":"A671","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q5STD2"},{"id":"A672","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q5SQ85"},{"id":"A673","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q1XI16"},{"id":"A674","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q1XI12"},{"id":"A675","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/Q15517"},{"id":"A676","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/O43509"},{"id":"A677","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/O19084"},{"id":"A678","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/B0UYZ7"},{"id":"A679","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/B0S7V2"},{"id":"A680","pred":"uniprot_id","subj":"T648","obj":"https://www.uniprot.org/uniprot/A5A6L9"}],"text":" individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) proteins. Here Watanabe et al. report that glycans of coronavirus"}

    LitCovid-sample-PD-GO-BP-0

    {"project":"LitCovid-sample-PD-GO-BP-0","denotations":[{"id":"T8","span":{"begin":97,"end":110},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":" individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) proteins. Here Watanabe et al. report that glycans of coronavirus"}

    LitCovid-sample-GO-BP

    {"project":"LitCovid-sample-GO-BP","denotations":[{"id":"T8","span":{"begin":97,"end":110},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":" individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) proteins. Here Watanabe et al. report that glycans of coronavirus"}

    LitCovid-PD-GO-BP

    {"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T9","span":{"begin":97,"end":110},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":" individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) proteins. Here Watanabe et al. report that glycans of coronavirus"}

    LitCovid-sentences

    {"project":"LitCovid-sentences","denotations":[{"id":"T9","span":{"begin":97,"end":193},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":" individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) proteins. Here Watanabe et al. report that glycans of coronavirus"}