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PMC:7253482 / 10518-11629 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
324 71-87 Species denotes MERS coronavirus Tax:1335626
325 88-93 Gene denotes spike Gene:43740568
326 34-49 Chemical denotes N-linked glycan
327 62-66 Disease denotes SARS MESH:D045169
344 191-206 Chemical denotes N-linked glycan
345 404-410 Chemical denotes Glycan MESH:D011134
346 441-447 Chemical denotes glycan MESH:D011134
347 514-523 Chemical denotes N-glycans
348 582-588 Chemical denotes glycan MESH:D011134
349 600-612 Chemical denotes oligomannose
350 618-624 Chemical denotes glycan MESH:D011134
351 643-654 Chemical denotes Man9GlcNAc2 MESH:C475461
352 658-669 Chemical denotes Man5GlcNAc2 MESH:C058642
353 716-723 Chemical denotes glycans MESH:D011134
354 771-778 Chemical denotes glycans MESH:D011134
355 980-987 Chemical denotes glycans MESH:D011134
356 122-126 Disease denotes MERS MESH:D018352
357 133-137 Disease denotes SARS MESH:D045169
358 221-225 Disease denotes MERS MESH:D018352
359 232-236 Disease denotes SARS MESH:D045169

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T65 94-107 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T66 140-148 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T67 239-252 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T68 265-273 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T69 858-860 Body_part denotes A1 http://purl.org/sig/ont/fma/fma66592

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T36 62-66 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T37 133-137 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T38 232-236 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T39 864-867 Disease denotes FA4 http://purl.obolibrary.org/obo/MONDO_0009214
T40 931-934 Disease denotes pie http://purl.obolibrary.org/obo/MONDO_0000923

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T60 119-120 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T61 131-132 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T62 219-220 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T63 230-231 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T64 393-395 http://purl.obolibrary.org/obo/CL_0000453 denotes LC
T65 400-402 http://purl.obolibrary.org/obo/CLO_0007874 denotes MS
T66 633-635 http://purl.obolibrary.org/obo/CLO_0007490 denotes M9

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T109 94-107 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T110 140-148 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T111 239-252 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T112 265-273 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T113 316-321 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T114 338-341 Chemical denotes Glu http://purl.obolibrary.org/obo/CHEBI_16015|http://purl.obolibrary.org/obo/CHEBI_18237|http://purl.obolibrary.org/obo/CHEBI_29972
T117 393-395 Chemical denotes LC http://purl.obolibrary.org/obo/CHEBI_73582
T118 400-402 Chemical denotes MS http://purl.obolibrary.org/obo/CHEBI_73613
T119 404-410 Chemical denotes Glycan http://purl.obolibrary.org/obo/CHEBI_18154
T120 480-483 Chemical denotes ion http://purl.obolibrary.org/obo/CHEBI_24870
T121 514-523 Chemical denotes N-glycans http://purl.obolibrary.org/obo/CHEBI_59520
T122 516-523 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T123 589-594 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T124 633-635 Chemical denotes M9 http://purl.obolibrary.org/obo/CHEBI_140164
T125 716-723 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T126 771-778 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T127 980-987 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T128 1101-1103 Chemical denotes SI http://purl.obolibrary.org/obo/CHEBI_90326

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T29 20-24 http://purl.obolibrary.org/obo/BFO_0000029 denotes site
T30 177-181 http://purl.obolibrary.org/obo/BFO_0000029 denotes site

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T18456 0-4 NN denotes Fig.
T38026 5-6 CD denotes 2
T11696 7-19 JJ denotes Quantitative
T81709 20-33 JJ denotes site-specific
T93400 34-42 JJ denotes N-linked
T30000 43-49 NN denotes glycan
T11057 50-58 NN denotes analysis
T72208 59-61 IN denotes of
T91997 62-66 NNS denotes SARS
T44946 67-70 CC denotes and
T46103 71-75 NN denotes MERS
T75132 76-87 NN denotes coronavirus
T95276 88-93 NN denotes spike
T3262 94-107 NNS denotes glycoproteins
T84029 109-117 VBN denotes Purified
T48343 118-119 -LRB- denotes (
T26533 119-120 DT denotes a
T86435 120-121 -RRB- denotes )
T44348 122-126 NNS denotes MERS
T9629 127-130 CC denotes and
T48581 131-132 NN denotes b
T35585 133-137 NNP denotes SARS
T95868 138-139 NN denotes S
T54061 140-148 NNS denotes proteins
T60926 149-153 VBD denotes were
T7737 154-176 JJ denotes digested. Quantitative
T84409 177-190 JJ denotes site-specific
T71906 191-199 JJ denotes N-linked
T31843 200-206 NN denotes glycan
T99530 207-215 NN denotes analysis
T57258 216-218 IN denotes of
T44594 219-220 DT denotes a
T81945 221-225 NN denotes MERS
T17293 226-229 CC denotes and
T47096 230-231 NN denotes b
T88210 232-236 NNP denotes SARS
T89662 237-238 NNP denotes S
T2440 239-252 NNS denotes glycoproteins
T15012 254-262 VBN denotes Purified
T24811 263-264 NN denotes S
T17113 265-273 NNS denotes proteins
T45227 274-278 VBD denotes were
T93138 279-287 VBN denotes digested
T86575 288-292 IN denotes with
T51812 293-300 NN denotes trypsin
T21664 300-301 -COMMA- denotes ,
T40461 302-314 NN denotes chymotrypsin
T86817 314-315 -COMMA- denotes ,
T72210 316-327 JJ denotes alpha-lytic
T56838 328-336 NN denotes protease
T18984 336-337 -COMMA- denotes ,
T43478 338-343 NN denotes Glu-C
T17765 343-344 -COMMA- denotes ,
T82693 345-348 CC denotes and
T61553 349-356 NN denotes trypsin
T17900 357-361 CC denotes plus
T8143 362-374 NN denotes chymotrypsin
T72819 374-375 -COMMA- denotes ,
T41703 376-380 RB denotes then
T92120 381-389 VBN denotes analysed
T90251 390-392 IN denotes by
T16273 393-399 NN denotes LC-ESI
T68396 400-402 NN denotes MS
T44906 404-410 NN denotes Glycan
T82137 411-423 NNS denotes compositions
T30425 424-427 VBP denotes are
T96908 428-433 VBN denotes based
T54010 434-436 IN denotes on
T48766 437-440 DT denotes the
T91677 441-447 NN denotes glycan
T73464 448-455 NN denotes library
T90139 456-465 VBN denotes generated
T52708 466-470 IN denotes from
T79176 471-483 JJ denotes negative-ion
T47018 484-488 NN denotes mass
T10175 489-501 NN denotes spectrometry
T31210 502-504 IN denotes of
T92018 505-513 VBN denotes released
T52131 514-523 NNS denotes N-glycans
T86682 525-528 DT denotes The
T44329 529-532 NN denotes bar
T14374 533-539 NNS denotes graphs
T64768 540-549 VBP denotes represent
T3818 550-553 DT denotes the
T94495 554-562 JJ denotes relative
T48265 563-573 NNS denotes quantities
T96495 574-576 IN denotes of
T19945 577-581 DT denotes each
T83205 582-588 NN denotes glycan
T29095 589-594 NN denotes group
T55384 595-599 IN denotes with
T66610 600-617 JJ denotes oligomannose-type
T19908 618-624 NN denotes glycan
T86925 625-631 NN denotes series
T92642 632-633 -LRB- denotes (
T83803 633-635 NN denotes M9
T3618 636-638 TO denotes to
T13438 639-641 NN denotes M5
T28189 641-642 -SEMICOLON- denotes ;
T91020 643-654 NN denotes Man9GlcNAc2
T50998 655-657 TO denotes to
T81038 658-669 NN denotes Man5GlcNAc2
T43620 669-670 -RRB- denotes )
T51798 671-672 -LRB- denotes (
T99047 672-677 JJ denotes green
T46694 677-678 -RRB- denotes )
T68800 678-679 -COMMA- denotes ,
T39300 680-692 VBN denotes afucosylated
T25055 693-696 CC denotes and
T40035 697-708 VBN denotes fucosylated
T28659 709-715 NN denotes hybrid
T49864 716-723 NNS denotes glycans
T85300 724-725 -LRB- denotes (
T6763 725-731 NNP denotes Hybrid
T31145 732-733 CC denotes &
T19441 734-735 NNP denotes F
T10907 736-742 NNP denotes Hybrid
T44180 742-743 -RRB- denotes )
T33083 744-745 -LRB- denotes (
T64136 745-751 VBN denotes dashed
T25133 752-756 NN denotes pink
T8494 756-757 -RRB- denotes )
T31666 757-758 -COMMA- denotes ,
T18761 759-762 CC denotes and
T18896 763-770 JJ denotes complex
T10070 771-778 NNS denotes glycans
T81627 779-786 VBD denotes grouped
T40473 787-796 VBG denotes according
T20923 797-799 TO denotes to
T55810 800-803 DT denotes the
T71311 804-810 NN denotes number
T36859 811-813 IN denotes of
T43194 814-822 NNS denotes antennae
T27706 823-826 CC denotes and
T75366 827-835 NN denotes presence
T12646 836-838 IN denotes of
T91547 839-843 NN denotes core
T95927 844-856 NN denotes fucosylation
T75194 857-858 -LRB- denotes (
T61150 858-860 NN denotes A1
T11703 861-863 TO denotes to
T84163 864-867 NN denotes FA4
T52589 867-868 -RRB- denotes )
T3633 869-870 -LRB- denotes (
T70036 870-874 NN denotes pink
T45573 874-875 -RRB- denotes )
T26477 877-881 VBN denotes Left
T2107 882-884 TO denotes to
T54092 885-890 JJ denotes right
T12300 890-891 -SEMICOLON- denotes ;
T51881 892-897 JJS denotes least
T18623 898-907 VBN denotes processed
T90503 908-910 TO denotes to
T56324 911-915 RBS denotes most
T7681 916-925 VBN denotes processed
T36496 927-930 DT denotes The
T76280 931-934 NN denotes pie
T23755 935-941 NNS denotes charts
T57945 942-951 VBP denotes summarise
T4038 952-955 DT denotes the
T33045 956-970 NN denotes quantification
T90570 971-973 IN denotes of
T98847 974-979 DT denotes these
T1661 980-987 NNS denotes glycans
T49504 989-999 JJ denotes Additional
T14064 1000-1013 JJ denotes compositional
T57392 1014-1025 NN denotes information
T38584 1026-1035 VBG denotes regarding
T17537 1036-1039 DT denotes the
T42677 1040-1052 NN denotes distribution
T43754 1053-1055 IN denotes of
T2132 1056-1068 NN denotes fucosylation
T30799 1069-1072 CC denotes and
T46773 1073-1084 NN denotes sialylation
T29532 1085-1088 MD denotes can
T93684 1089-1091 VB denotes be
T40276 1092-1097 VBN denotes found
T86408 1098-1100 IN denotes in
T98608 1101-1103 NN denotes SI
T42803 1104-1110 NN denotes Fig. 3
R91856 T93400 T18456 arg1Of N-linked,Fig.
R27276 T93400 T38026 arg1Of N-linked,2
R69083 T93400 T11696 arg1Of N-linked,Quantitative
R93804 T93400 T81709 arg1Of N-linked,site-specific
R10946 T3262 T93400 arg1Of glycoproteins,N-linked
R9907 T3262 T30000 arg1Of glycoproteins,glycan
R88458 T3262 T11057 arg1Of glycoproteins,analysis
R42900 T11057 T72208 arg1Of analysis,of
R64184 T91997 T72208 arg2Of SARS,of
R28302 T11057 T44946 arg1Of analysis,and
R79050 T46103 T44946 arg2Of MERS,and
R44378 T3262 T46103 arg1Of glycoproteins,MERS
R52677 T3262 T75132 arg1Of glycoproteins,coronavirus
R2412 T3262 T95276 arg1Of glycoproteins,spike
R34359 T44348 T84029 arg2Of MERS,Purified
R46603 T26533 T48343 arg1Of a,(
R43475 T44348 T26533 arg1Of MERS,a
R31284 T26533 T86435 arg1Of a,)
R4871 T44348 T9629 arg1Of MERS,and
R66915 T54061 T9629 arg2Of proteins,and
R83995 T54061 T48581 arg1Of proteins,b
R15971 T54061 T35585 arg1Of proteins,SARS
R52171 T54061 T95868 arg1Of proteins,S
R2785 T9629 T60926 arg1Of and,were
R85394 T99530 T60926 arg2Of analysis,were
R10363 T84409 T7737 arg1Of site-specific,digested. Quantitative
R2842 T99530 T84409 arg1Of analysis,site-specific
R28202 T99530 T71906 arg1Of analysis,N-linked
R19873 T99530 T31843 arg1Of analysis,glycan
R59353 T99530 T57258 arg1Of analysis,of
R7341 T2440 T57258 arg2Of glycoproteins,of
R62064 T2440 T44594 arg1Of glycoproteins,a
R95696 T2440 T81945 arg1Of glycoproteins,MERS
R66989 T81945 T17293 arg1Of MERS,and
R92167 T47096 T17293 arg2Of b,and
R18813 T2440 T47096 arg1Of glycoproteins,b
R92098 T89662 T88210 arg1Of S,SARS
R18144 T2440 T89662 arg1Of glycoproteins,S
R17818 T17113 T15012 arg2Of proteins,Purified
R20171 T17113 T24811 arg1Of proteins,S
R54519 T17113 T45227 arg1Of proteins,were
R41908 T93138 T45227 arg2Of digested,were
R34019 T17113 T93138 arg2Of proteins,digested
R92524 T93138 T86575 arg1Of digested,with
R49275 T82693 T86575 arg2Of and,with
R65867 T51812 T21664 arg1Of trypsin,","
R94049 T40461 T21664 arg2Of chymotrypsin,","
R63626 T21664 T86817 arg1Of ",",","
R8259 T56838 T86817 arg2Of protease,","
R9715 T56838 T72210 arg1Of protease,alpha-lytic
R16879 T86817 T18984 arg1Of ",",","
R24076 T43478 T18984 arg2Of Glu-C,","
R86859 T82693 T17765 arg1Of and,","
R3858 T18984 T82693 arg1Of ",",and
R99327 T17900 T82693 arg2Of plus,and
R9362 T61553 T17900 arg1Of trypsin,plus
R22134 T8143 T17900 arg2Of chymotrypsin,plus
R19033 T82693 T72819 arg1Of and,","
R79222 T92120 T41703 arg1Of analysed,then
R85329 T68396 T92120 arg1Of MS,analysed
R40328 T82693 T92120 arg2Of and,analysed
R18121 T68396 T90251 arg2Of MS,by
R50360 T68396 T16273 arg1Of MS,LC-ESI
R52896 T82137 T44906 arg1Of compositions,Glycan
R76273 T82137 T30425 arg1Of compositions,are
R19288 T96908 T30425 arg2Of based,are
R69930 T82137 T96908 arg2Of compositions,based
R30949 T96908 T54010 arg1Of based,on
R85062 T73464 T54010 arg2Of library,on
R79421 T73464 T48766 arg1Of library,the
R42008 T73464 T91677 arg1Of library,glycan
R75062 T73464 T90139 arg2Of library,generated
R41063 T90139 T52708 arg1Of generated,from
R78874 T10175 T52708 arg2Of spectrometry,from
R19392 T10175 T79176 arg1Of spectrometry,negative-ion
R52971 T10175 T47018 arg1Of spectrometry,mass
R61571 T10175 T31210 arg1Of spectrometry,of
R58051 T52131 T31210 arg2Of N-glycans,of
R88932 T52131 T92018 arg2Of N-glycans,released
R18043 T14374 T86682 arg1Of graphs,The
R14427 T14374 T44329 arg1Of graphs,bar
R39194 T14374 T64768 arg1Of graphs,represent
R58873 T48265 T64768 arg2Of quantities,represent
R53073 T48265 T3818 arg1Of quantities,the
R93381 T48265 T94495 arg1Of quantities,relative
R65536 T48265 T96495 arg1Of quantities,of
R92510 T29095 T96495 arg2Of group,of
R92729 T29095 T19945 arg1Of group,each
R96826 T29095 T83205 arg1Of group,glycan
R31695 T48265 T55384 arg1Of quantities,with
R16468 T86925 T55384 arg2Of series,with
R92800 T86925 T66610 arg1Of series,oligomannose-type
R17934 T86925 T19908 arg1Of series,glycan
R45134 T86925 T92642 arg1Of series,(
R15309 T83803 T92642 arg2Of M9,(
R89512 T43620 T92642 arg3Of ),(
R33694 T83803 T3618 arg1Of M9,to
R38109 T13438 T3618 arg2Of M5,to
R87502 T83803 T28189 arg1Of M9,;
R2243 T91020 T28189 arg2Of Man9GlcNAc2,;
R97730 T91020 T50998 arg1Of Man9GlcNAc2,to
R58922 T81038 T50998 arg2Of Man5GlcNAc2,to
R34518 T48265 T51798 arg1Of quantities,(
R23417 T99047 T51798 arg2Of green,(
R5616 T46694 T51798 arg3Of ),(
R84616 T64768 T68800 arg1Of represent,","
R87433 T39300 T68800 arg2Of afucosylated,","
R24969 T14374 T39300 arg1Of graphs,afucosylated
R25260 T49864 T39300 arg2Of glycans,afucosylated
R62271 T49864 T25055 arg1Of glycans,and
R4409 T49864 T40035 arg2Of glycans,fucosylated
R92116 T49864 T28659 arg1Of glycans,hybrid
R46655 T49864 T85300 arg1Of glycans,(
R9793 T10907 T85300 arg2Of Hybrid,(
R4478 T44180 T85300 arg3Of ),(
R95802 T10907 T6763 arg1Of Hybrid,Hybrid
R6504 T10907 T31145 arg1Of Hybrid,&
R79558 T10907 T19441 arg1Of Hybrid,F
R42935 T49864 T33083 arg1Of glycans,(
R87208 T64136 T33083 arg2Of dashed,(
R10051 T8494 T33083 arg3Of ),(
R74579 T25133 T64136 arg3Of pink,dashed
R51930 T18761 T31666 arg1Of and,","
R2562 T68800 T18761 arg1Of ",",and
R42213 T81627 T18761 arg2Of grouped,and
R59320 T10070 T18896 arg1Of glycans,complex
R55098 T10070 T81627 arg1Of glycans,grouped
R57595 T40473 T81627 arg2Of according,grouped
R31766 T40473 T20923 arg1Of according,to
R38059 T71311 T20923 arg2Of number,to
R43549 T71311 T55810 arg1Of number,the
R4429 T71311 T36859 arg1Of number,of
R3838 T27706 T36859 arg2Of and,of
R45557 T43194 T27706 arg1Of antennae,and
R5440 T75366 T27706 arg2Of presence,and
R36125 T27706 T12646 arg1Of and,of
R44856 T95927 T12646 arg2Of fucosylation,of
R35379 T95927 T91547 arg1Of fucosylation,core
R46249 T27706 T75194 arg1Of and,(
R3644 T61150 T75194 arg2Of A1,(
R20744 T52589 T75194 arg3Of ),(
R98287 T61150 T11703 arg1Of A1,to
R46106 T84163 T11703 arg2Of FA4,to
R42911 T27706 T3633 arg1Of and,(
R28028 T70036 T3633 arg2Of pink,(
R90176 T45573 T3633 arg3Of ),(
R87862 T51881 T26477 arg2Of least,Left
R72438 T26477 T2107 arg1Of Left,to
R3479 T54092 T2107 arg2Of right,to
R41132 T26477 T12300 arg1Of Left,;
R98810 T51881 T18623 arg2Of least,processed
R52995 T18623 T90503 arg1Of processed,to
R87062 T18623 T56324 arg1Of processed,most
R55397 T51881 T7681 arg2Of least,processed
R81612 T23755 T36496 arg1Of charts,The
R24697 T23755 T76280 arg1Of charts,pie
R38262 T23755 T57945 arg1Of charts,summarise
R57536 T33045 T57945 arg2Of quantification,summarise
R27546 T33045 T4038 arg1Of quantification,the
R50586 T33045 T90570 arg1Of quantification,of
R92766 T1661 T90570 arg2Of glycans,of
R83690 T1661 T98847 arg1Of glycans,these
R69392 T57392 T49504 arg1Of information,Additional
R28712 T57392 T14064 arg1Of information,compositional
R80462 T57392 T38584 arg1Of information,regarding
R65335 T42677 T38584 arg2Of distribution,regarding
R72605 T42677 T17537 arg1Of distribution,the
R35049 T42677 T43754 arg1Of distribution,of
R56534 T30799 T43754 arg2Of and,of
R47461 T2132 T30799 arg1Of fucosylation,and
R94401 T46773 T30799 arg2Of sialylation,and
R90758 T57392 T29532 arg1Of information,can
R27836 T40276 T29532 arg2Of found,can
R6643 T57392 T93684 arg1Of information,be
R29978 T40276 T93684 arg2Of found,be
R3329 T57392 T40276 arg2Of information,found
R64553 T40276 T86408 arg1Of found,in
R27405 T42803 T86408 arg2Of Fig. 3,in
R58091 T42803 T98608 arg1Of Fig. 3,SI

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T65 94-107 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T66 140-148 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T67 239-252 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T68 265-273 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T87 94-107 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T88 140-148 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T89 239-252 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T90 265-273 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T91 338-341 Chemical denotes Glu http://purl.obolibrary.org/obo/CHEBI_16015|http://purl.obolibrary.org/obo/CHEBI_18237|http://purl.obolibrary.org/obo/CHEBI_29972
T94 404-410 Chemical denotes Glycan http://purl.obolibrary.org/obo/CHEBI_18154
T95 480-483 Chemical denotes ion http://purl.obolibrary.org/obo/CHEBI_24870
T96 514-523 Chemical denotes N-glycans http://purl.obolibrary.org/obo/CHEBI_59520
T97 716-723 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T98 771-778 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T99 980-987 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T68 62-66 Species denotes SARS NCBItxid:694009
T69 71-87 Species denotes MERS coronavirus NCBItxid:1335626
T70 122-126 Species denotes MERS NCBItxid:1335626
T71 133-137 Species denotes SARS NCBItxid:694009
T72 221-225 Species denotes MERS NCBItxid:1335626
T73 232-236 Species denotes SARS NCBItxid:694009

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T61 0-108 Sentence denotes Fig. 2 Quantitative site-specific N-linked glycan analysis of SARS and MERS coronavirus spike glycoproteins.
T62 109-253 Sentence denotes Purified (a) MERS and b SARS S proteins were digested. Quantitative site-specific N-linked glycan analysis of a MERS and b SARS S glycoproteins.
T63 254-403 Sentence denotes Purified S proteins were digested with trypsin, chymotrypsin, alpha-lytic protease, Glu-C, and trypsin plus chymotrypsin, then analysed by LC-ESI MS.
T64 404-524 Sentence denotes Glycan compositions are based on the glycan library generated from negative-ion mass spectrometry of released N-glycans.
T65 525-876 Sentence denotes The bar graphs represent the relative quantities of each glycan group with oligomannose-type glycan series (M9 to M5; Man9GlcNAc2 to Man5GlcNAc2) (green), afucosylated and fucosylated hybrid glycans (Hybrid & F Hybrid) (dashed pink), and complex glycans grouped according to the number of antennae and presence of core fucosylation (A1 to FA4) (pink).
T66 877-926 Sentence denotes Left to right; least processed to most processed.
T67 927-988 Sentence denotes The pie charts summarise the quantification of these glycans.
T68 989-1111 Sentence denotes Additional compositional information regarding the distribution of fucosylation and sialylation can be found in SI Fig. 3.

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T33 62-66 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T34 133-137 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T35 232-236 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
326 34-49 Chemical denotes N-linked glycan
327 62-66 Disease denotes SARS MESH:D045169
324 71-87 Species denotes MERS coronavirus Tax:1335626
325 88-93 Gene denotes spike Gene:43740568
356 122-126 Disease denotes MERS MESH:D018352
357 133-137 Disease denotes SARS MESH:D045169
344 191-206 Chemical denotes N-linked glycan
358 221-225 Disease denotes MERS MESH:D018352
359 232-236 Disease denotes SARS MESH:D045169
345 404-410 Chemical denotes Glycan MESH:D011134
346 441-447 Chemical denotes glycan MESH:D011134
347 514-523 Chemical denotes N-glycans
348 582-588 Chemical denotes glycan MESH:D011134
349 600-612 Chemical denotes oligomannose
350 618-624 Chemical denotes glycan MESH:D011134
351 643-654 Chemical denotes Man9GlcNAc2 MESH:C475461
352 658-669 Chemical denotes Man5GlcNAc2 MESH:C058642
353 716-723 Chemical denotes glycans MESH:D011134
354 771-778 Chemical denotes glycans MESH:D011134
355 980-987 Chemical denotes glycans MESH:D011134

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T2806 88-107 Protein denotes spike glycoproteins https://www.uniprot.org/uniprot/Q9QAS2|https://www.uniprot.org/uniprot/Q9QAR5|https://www.uniprot.org/uniprot/Q9QAQ8|https://www.uniprot.org/uniprot/Q9IW04|https://www.uniprot.org/uniprot/Q9IKD1|https://www.uniprot.org/uniprot/Q990M4|https://www.uniprot.org/uniprot/Q990M3|https://www.uniprot.org/uniprot/Q990M2|https://www.uniprot.org/uniprot/Q990M1|https://www.uniprot.org/uniprot/Q91AV1|https://www.uniprot.org/uniprot/Q91A26|https://www.uniprot.org/uniprot/Q8V436|https://www.uniprot.org/uniprot/Q8JSP8|https://www.uniprot.org/uniprot/Q8BB25|https://www.uniprot.org/uniprot/Q86623|https://www.uniprot.org/uniprot/Q85088|https://www.uniprot.org/uniprot/Q85087|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q80BV6|https://www.uniprot.org/uniprot/Q7TFB1|https://www.uniprot.org/uniprot/Q7TFA2|https://www.uniprot.org/uniprot/Q7TA19|https://www.uniprot.org/uniprot/Q7T6T3|https://www.uniprot.org/uniprot/Q7T696|https://www.uniprot.org/uniprot/Q77NC4|https://www.uniprot.org/uniprot/Q6TNF9|https://www.uniprot.org/uniprot/Q6R1L7|https://www.uniprot.org/uniprot/Q6QU82|https://www.uniprot.org/uniprot/Q6Q1S2|https://www.uniprot.org/uniprot/Q696Q6|https://www.uniprot.org/uniprot/Q66291|https://www.uniprot.org/uniprot/Q66290|https://www.uniprot.org/uniprot/Q66199|https://www.uniprot.org/uniprot/Q66177|https://www.uniprot.org/uniprot/Q66176|https://www.uniprot.org/uniprot/Q66174|https://www.uniprot.org/uniprot/Q65984|https://www.uniprot.org/uniprot/Q5MQD0|https://www.uniprot.org/uniprot/Q5I5X9|https://www.uniprot.org/uniprot/Q5DIY0|https://www.uniprot.org/uniprot/Q5DIX9|https://www.uniprot.org/uniprot/Q5DIX8|https://www.uniprot.org/uniprot/Q5DIX7|https://www.uniprot.org/uniprot/Q52PA3|https://www.uniprot.org/uniprot/Q4ZJS1|https://www.uniprot.org/uniprot/Q4U5G0|https://www.uniprot.org/uniprot/Q3T8J0|https://www.uniprot.org/uniprot/Q3LZX1|https://www.uniprot.org/uniprot/Q3I5J5|https://www.uniprot.org/uniprot/Q14EB0|https://www.uniprot.org/uniprot/Q0ZME7|https://www.uniprot.org/uniprot/Q0Q4F2|https://www.uniprot.org/uniprot/Q0Q475|https://www.uniprot.org/uniprot/Q0Q466|https://www.uniprot.org/uniprot/Q0GNB8|https://www.uniprot.org/uniprot/Q02385|https://www.uniprot.org/uniprot/Q02167|https://www.uniprot.org/uniprot/Q01977|https://www.uniprot.org/uniprot/Q008X4|https://www.uniprot.org/uniprot/P89344|https://www.uniprot.org/uniprot/P89343|https://www.uniprot.org/uniprot/P89342|https://www.uniprot.org/uniprot/P59594|https://www.uniprot.org/uniprot/P36334|https://www.uniprot.org/uniprot/P36300|https://www.uniprot.org/uniprot/P33470|https://www.uniprot.org/uniprot/P30208|https://www.uniprot.org/uniprot/P30207|https://www.uniprot.org/uniprot/P30206|https://www.uniprot.org/uniprot/P27662|https://www.uniprot.org/uniprot/P27655|https://www.uniprot.org/uniprot/P27277|https://www.uniprot.org/uniprot/P25194|https://www.uniprot.org/uniprot/P25193|https://www.uniprot.org/uniprot/P25192|https://www.uniprot.org/uniprot/P25191|https://www.uniprot.org/uniprot/P25190|https://www.uniprot.org/uniprot/P24413|https://www.uniprot.org/uniprot/P23052|https://www.uniprot.org/uniprot/P22432|https://www.uniprot.org/uniprot/P18450|https://www.uniprot.org/uniprot/P17662|https://www.uniprot.org/uniprot/P15777|https://www.uniprot.org/uniprot/P15423|https://www.uniprot.org/uniprot/P12722|https://www.uniprot.org/uniprot/P12651|https://www.uniprot.org/uniprot/P12650|https://www.uniprot.org/uniprot/P12647|https://www.uniprot.org/uniprot/P11225|https://www.uniprot.org/uniprot/P11224|https://www.uniprot.org/uniprot/P11223|https://www.uniprot.org/uniprot/P10033|https://www.uniprot.org/uniprot/P0DTC2|https://www.uniprot.org/uniprot/P07946|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P05135|https://www.uniprot.org/uniprot/P05134|https://www.uniprot.org/uniprot/O90304|https://www.uniprot.org/uniprot/O39227|https://www.uniprot.org/uniprot/K9N5Q8|https://www.uniprot.org/uniprot/A3EXG6|https://www.uniprot.org/uniprot/A3EXD0|https://www.uniprot.org/uniprot/A3EX94
T2910 138-148 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T2943 237-252 Protein denotes S glycoproteins https://www.uniprot.org/uniprot/Q9QAS2|https://www.uniprot.org/uniprot/Q9QAR5|https://www.uniprot.org/uniprot/Q9QAQ8|https://www.uniprot.org/uniprot/Q9IW04|https://www.uniprot.org/uniprot/Q9IKD1|https://www.uniprot.org/uniprot/Q990M4|https://www.uniprot.org/uniprot/Q990M3|https://www.uniprot.org/uniprot/Q990M2|https://www.uniprot.org/uniprot/Q990M1|https://www.uniprot.org/uniprot/Q91AV1|https://www.uniprot.org/uniprot/Q91A26|https://www.uniprot.org/uniprot/Q8V436|https://www.uniprot.org/uniprot/Q8JSP8|https://www.uniprot.org/uniprot/Q8BB25|https://www.uniprot.org/uniprot/Q86623|https://www.uniprot.org/uniprot/Q85088|https://www.uniprot.org/uniprot/Q85087|https://www.uniprot.org/uniprot/Q80BV6|https://www.uniprot.org/uniprot/Q7TFB1|https://www.uniprot.org/uniprot/Q7TFA2|https://www.uniprot.org/uniprot/Q7TA19|https://www.uniprot.org/uniprot/Q7T6T3|https://www.uniprot.org/uniprot/Q7T696|https://www.uniprot.org/uniprot/Q77NC4|https://www.uniprot.org/uniprot/Q6TNF9|https://www.uniprot.org/uniprot/Q6R1L7|https://www.uniprot.org/uniprot/Q6QU82|https://www.uniprot.org/uniprot/Q6Q1S2|https://www.uniprot.org/uniprot/Q696Q6|https://www.uniprot.org/uniprot/Q66291|https://www.uniprot.org/uniprot/Q66290|https://www.uniprot.org/uniprot/Q66199|https://www.uniprot.org/uniprot/Q66177|https://www.uniprot.org/uniprot/Q66176|https://www.uniprot.org/uniprot/Q66174|https://www.uniprot.org/uniprot/Q65984|https://www.uniprot.org/uniprot/Q5MQD0|https://www.uniprot.org/uniprot/Q5I5X9|https://www.uniprot.org/uniprot/Q5DIY0|https://www.uniprot.org/uniprot/Q5DIX9|https://www.uniprot.org/uniprot/Q5DIX8|https://www.uniprot.org/uniprot/Q5DIX7|https://www.uniprot.org/uniprot/Q52PA3|https://www.uniprot.org/uniprot/Q4ZJS1|https://www.uniprot.org/uniprot/Q4U5G0|https://www.uniprot.org/uniprot/Q3T8J0|https://www.uniprot.org/uniprot/Q3LZX1|https://www.uniprot.org/uniprot/Q3I5J5|https://www.uniprot.org/uniprot/Q14EB0|https://www.uniprot.org/uniprot/Q0ZME7|https://www.uniprot.org/uniprot/Q0Q4F2|https://www.uniprot.org/uniprot/Q0Q475|https://www.uniprot.org/uniprot/Q0Q466|https://www.uniprot.org/uniprot/Q0GNB8|https://www.uniprot.org/uniprot/Q02385|https://www.uniprot.org/uniprot/Q02167|https://www.uniprot.org/uniprot/Q01977|https://www.uniprot.org/uniprot/Q008X4|https://www.uniprot.org/uniprot/P89344|https://www.uniprot.org/uniprot/P89343|https://www.uniprot.org/uniprot/P89342|https://www.uniprot.org/uniprot/P59594|https://www.uniprot.org/uniprot/P36334|https://www.uniprot.org/uniprot/P36300|https://www.uniprot.org/uniprot/P33470|https://www.uniprot.org/uniprot/P30208|https://www.uniprot.org/uniprot/P30207|https://www.uniprot.org/uniprot/P30206|https://www.uniprot.org/uniprot/P30019|https://www.uniprot.org/uniprot/P27655|https://www.uniprot.org/uniprot/P25194|https://www.uniprot.org/uniprot/P25193|https://www.uniprot.org/uniprot/P25192|https://www.uniprot.org/uniprot/P25191|https://www.uniprot.org/uniprot/P25190|https://www.uniprot.org/uniprot/P24413|https://www.uniprot.org/uniprot/P23052|https://www.uniprot.org/uniprot/P22432|https://www.uniprot.org/uniprot/P18450|https://www.uniprot.org/uniprot/P17662|https://www.uniprot.org/uniprot/P15777|https://www.uniprot.org/uniprot/P15423|https://www.uniprot.org/uniprot/P12722|https://www.uniprot.org/uniprot/P12651|https://www.uniprot.org/uniprot/P12650|https://www.uniprot.org/uniprot/P11225|https://www.uniprot.org/uniprot/P11224|https://www.uniprot.org/uniprot/P11223|https://www.uniprot.org/uniprot/P10033|https://www.uniprot.org/uniprot/P0DTC2|https://www.uniprot.org/uniprot/P07946|https://www.uniprot.org/uniprot/P05135|https://www.uniprot.org/uniprot/P05134|https://www.uniprot.org/uniprot/O90304|https://www.uniprot.org/uniprot/O39227|https://www.uniprot.org/uniprot/K9N5Q8|https://www.uniprot.org/uniprot/A3EXG6|https://www.uniprot.org/uniprot/A3EXD0|https://www.uniprot.org/uniprot/A3EX94
T3042 263-273 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T3075 293-300 Protein denotes trypsin https://www.uniprot.org/uniprot/P83348|https://www.uniprot.org/uniprot/P81524|https://www.uniprot.org/uniprot/P81071|https://www.uniprot.org/uniprot/P70059|https://www.uniprot.org/uniprot/P51588|https://www.uniprot.org/uniprot/P35051|https://www.uniprot.org/uniprot/P35050|https://www.uniprot.org/uniprot/P35048|https://www.uniprot.org/uniprot/P35034|https://www.uniprot.org/uniprot/P19799|https://www.uniprot.org/uniprot/P00764|https://www.uniprot.org/uniprot/P00761|https://www.uniprot.org/uniprot/O97399
T3088 302-314 Protein denotes chymotrypsin https://www.uniprot.org/uniprot/P81521|https://www.uniprot.org/uniprot/P35002|https://www.uniprot.org/uniprot/O97398
T3091 316-321 Protein denotes alpha https://www.uniprot.org/uniprot/Q66765|https://www.uniprot.org/uniprot/Q66764|https://www.uniprot.org/uniprot/Q2V6G9|https://www.uniprot.org/uniprot/Q155Z9|https://www.uniprot.org/uniprot/P32540|https://www.uniprot.org/uniprot/P17594|https://www.uniprot.org/uniprot/P17593|https://www.uniprot.org/uniprot/P12296|https://www.uniprot.org/uniprot/P03304|https://www.uniprot.org/uniprot/C0MHL9|https://www.uniprot.org/uniprot/B8XTP8
T3102 328-336 Protein denotes protease https://www.uniprot.org/uniprot/Q9Y6I0|https://www.uniprot.org/uniprot/Q9WJC5|https://www.uniprot.org/uniprot/Q9WF19|https://www.uniprot.org/uniprot/Q9WC63|https://www.uniprot.org/uniprot/Q9WC54|https://www.uniprot.org/uniprot/Q9UKI1|https://www.uniprot.org/uniprot/Q9UKI0|https://www.uniprot.org/uniprot/Q9UKH6|https://www.uniprot.org/uniprot/Q9UKH5|https://www.uniprot.org/uniprot/P04323|https://www.uniprot.org/uniprot/P04023|https://www.uniprot.org/uniprot/P03371|https://www.uniprot.org/uniprot/P03370|https://www.uniprot.org/uniprot/P03369|https://www.uniprot.org/uniprot/P03368|https://www.uniprot.org/uniprot/P03367|https://www.uniprot.org/uniprot/P03366|https://www.uniprot.org/uniprot/P03365|https://www.uniprot.org/uniprot/P03363|https://www.uniprot.org/uniprot/P03362|https://www.uniprot.org/uniprot/P03361|https://www.uniprot.org/uniprot/P03360|https://www.uniprot.org/uniprot/P03359|https://www.uniprot.org/uniprot/P03357|https://www.uniprot.org/uniprot/P03356|https://www.uniprot.org/uniprot/P03355|https://www.uniprot.org/uniprot/P03353|https://www.uniprot.org/uniprot/P03253|https://www.uniprot.org/uniprot/P03252|https://www.uniprot.org/uniprot/P03234|https://www.uniprot.org/uniprot/O93215|https://www.uniprot.org/uniprot/O92808|https://www.uniprot.org/uniprot/O91080|https://www.uniprot.org/uniprot/O89940|https://www.uniprot.org/uniprot/O89811|https://www.uniprot.org/uniprot/O89290|https://www.uniprot.org/uniprot/O73194|https://www.uniprot.org/uniprot/O71150|https://www.uniprot.org/uniprot/O71070|https://www.uniprot.org/uniprot/O56228|https://www.uniprot.org/uniprot/O56227|https://www.uniprot.org/uniprot/O41798|https://www.uniprot.org/uniprot/O40958|https://www.uniprot.org/uniprot/O36367|https://www.uniprot.org/uniprot/O12158|https://www.uniprot.org/uniprot/O09798|https://www.uniprot.org/uniprot/O09777|https://www.uniprot.org/uniprot/D2K3N9|https://www.uniprot.org/uniprot/D2K3N8|https://www.uniprot.org/uniprot/D0UZM9|https://www.uniprot.org/uniprot/A0A0U3TYK5|https://www.uniprot.org/uniprot/A0A0A8IBU6|https://www.uniprot.org/uniprot/Q9UKH4|https://www.uniprot.org/uniprot/Q9QSR3|https://www.uniprot.org/uniprot/Q9QM72|https://www.uniprot.org/uniprot/Q9QJ30|https://www.uniprot.org/uniprot/Q9QBZ9|https://www.uniprot.org/uniprot/Q9QBZ5|https://www.uniprot.org/uniprot/Q9QBZ1|https://www.uniprot.org/uniprot/Q9QBY3|https://www.uniprot.org/uniprot/Q9Q720|https://www.uniprot.org/uniprot/Q9IZT3|https://www.uniprot.org/uniprot/Q9IZT2|https://www.uniprot.org/uniprot/Q9IRA3|https://www.uniprot.org/uniprot/Q9IIH4|https://www.uniprot.org/uniprot/Q9IDV9|https://www.uniprot.org/uniprot/Q9E6P2|https://www.uniprot.org/uniprot/Q9E6P1|https://www.uniprot.org/uniprot/Q96629|https://www.uniprot.org/uniprot/Q91QZ3|https://www.uniprot.org/uniprot/Q8JN66|https://www.uniprot.org/uniprot/Q8I7P9|https://www.uniprot.org/uniprot/Q8AII1|https://www.uniprot.org/uniprot/Q89928|https://www.uniprot.org/uniprot/Q89855|https://www.uniprot.org/uniprot/Q89703|https://www.uniprot.org/uniprot/Q89548|https://www.uniprot.org/uniprot/Q88140|https://www.uniprot.org/uniprot/Q85590|https://www.uniprot.org/uniprot/Q85571|https://www.uniprot.org/uniprot/Q85570|https://www.uniprot.org/uniprot/Q84177|https://www.uniprot.org/uniprot/Q83906|https://www.uniprot.org/uniprot/Q83417|https://www.uniprot.org/uniprot/Q82859|https://www.uniprot.org/uniprot/Q82851|https://www.uniprot.org/uniprot/Q7SVK7|https://www.uniprot.org/uniprot/Q7M6L1|https://www.uniprot.org/uniprot/Q7M6L0|https://www.uniprot.org/uniprot/Q79666|https://www.uniprot.org/uniprot/Q79582|https://www.uniprot.org/uniprot/Q77906|https://www.uniprot.org/uniprot/Q777B6|https://www.uniprot.org/uniprot/Q77373|https://www.uniprot.org/uniprot/Q76634|https://www.uniprot.org/uniprot/Q76629|https://www.uniprot.org/uniprot/Q76605|https://www.uniprot.org/uniprot/Q75002|https://www.uniprot.org/uniprot/Q74120|https://www.uniprot.org/uniprot/Q73368|https://www.uniprot.org/uniprot/Q6UDK6|https://www.uniprot.org/uniprot/Q6UDK5|https://www.uniprot.org/uniprot/Q6SW62|https://www.uniprot.org/uniprot/Q6SW61|https://www.uniprot.org/uniprot/Q6S6T7|https://www.uniprot.org/uniprot/Q6S6T6|https://www.uniprot.org/uniprot/Q69263|https://www.uniprot.org/uniprot/Q69030|https://www.uniprot.org/uniprot/Q66541|https://www.uniprot.org/uniprot/Q65ZF9|https://www.uniprot.org/uniprot/Q65652|https://www.uniprot.org/uniprot/Q65593|https://www.uniprot.org/uniprot/Q64962|https://www.uniprot.org/uniprot/Q61577|https://www.uniprot.org/uniprot/Q5TJ03|https://www.uniprot.org/uniprot/Q4U0X6|https://www.uniprot.org/uniprot/Q3KSP9|https://www.uniprot.org/uniprot/Q2Q1R2|https://www.uniprot.org/uniprot/Q2HRB6|https://www.uniprot.org/uniprot/Q2HRB5|https://www.uniprot.org/uniprot/Q27YG9|https://www.uniprot.org/uniprot/Q1HVC7|https://www.uniprot.org/uniprot/Q18LE3|https://www.uniprot.org/uniprot/Q0R5R3|https://www.uniprot.org/uniprot/Q0R5R2|https://www.uniprot.org/uniprot/Q09SZ9|https://www.uniprot.org/uniprot/Q02836|https://www.uniprot.org/uniprot/Q01002|https://www.uniprot.org/uniprot/P90341|https://www.uniprot.org/uniprot/P89449|https://www.uniprot.org/uniprot/P87563|https://www.uniprot.org/uniprot/P84454|https://www.uniprot.org/uniprot/P68986|https://www.uniprot.org/uniprot/P68985|https://www.uniprot.org/uniprot/P68984|https://www.uniprot.org/uniprot/P63131|https://www.uniprot.org/uniprot/P63129|https://www.uniprot.org/uniprot/P63128|https://www.uniprot.org/uniprot/P63127|https://www.uniprot.org/uniprot/P63125|https://www.uniprot.org/uniprot/P63124|https://www.uniprot.org/uniprot/P63123|https://www.uniprot.org/uniprot/P63122|https://www.uniprot.org/uniprot/P63121|https://www.uniprot.org/uniprot/P63120|https://www.uniprot.org/uniprot/P63119|https://www.uniprot.org/uniprot/P54817|https://www.uniprot.org/uniprot/P52369|https://www.uniprot.org/uniprot/P52351|https://www.uniprot.org/uniprot/P42672|https://www.uniprot.org/uniprot/P35990|https://www.uniprot.org/uniprot/P35963|https://www.uniprot.org/uniprot/P35956|https://www.uniprot.org/uniprot/P33459|https://www.uniprot.org/uniprot/P32542|https://www.uniprot.org/uniprot/P31822|https://www.uniprot.org/uniprot/P30202|https://www.uniprot.org/uniprot/P28936|https://www.uniprot.org/uniprot/P27980|https://www.uniprot.org/uniprot/P27973|https://www.uniprot.org/uniprot/P27528|https://www.uniprot.org/uniprot/P27502|https://www.uniprot.org/uniprot/P26810|https://www.uniprot.org/uniprot/P26809|https://www.uniprot.org/uniprot/P26808|https://www.uniprot.org/uniprot/P25059|https://www.uniprot.org/uniprot/P24740|https://www.uniprot.org/uniprot/P24433|https://www.uniprot.org/uniprot/P24107|https://www.uniprot.org/uniprot/P23984|https://www.uniprot.org/uniprot/P23427|https://www.uniprot.org/uniprot/P23426|https://www.uniprot.org/uniprot/P22382|https://www.uniprot.org/uniprot/P21414|https://www.uniprot.org/uniprot/P20892|https://www.uniprot.org/uniprot/P20876|https://www.uniprot.org/uniprot/P20875|https://www.uniprot.org/uniprot/P20825|https://www.uniprot.org/uniprot/P19561|https://www.uniprot.org/uniprot/P19560|https://www.uniprot.org/uniprot/P19505|https://www.uniprot.org/uniprot/P19202|https://www.uniprot.org/uniprot/P19199|https://www.uniprot.org/uniprot/P19151|https://www.uniprot.org/uniprot/P19119|https://www.uniprot.org/uniprot/P19028|https://www.uniprot.org/uniprot/P18802|https://www.uniprot.org/uniprot/P18096|https://www.uniprot.org/uniprot/P18042|https://www.uniprot.org/uniprot/P17965|https://www.uniprot.org/uniprot/P17757|https://www.uniprot.org/uniprot/P17283|https://www.uniprot.org/uniprot/P16901|https://www.uniprot.org/uniprot/P16753|https://www.uniprot.org/uniprot/P16423|https://www.uniprot.org/uniprot/P16088|https://www.uniprot.org/uniprot/P16046|https://www.uniprot.org/uniprot/P15833|https://www.uniprot.org/uniprot/P14078|https://www.uniprot.org/uniprot/P14074|https://www.uniprot.org/uniprot/P12502|https://www.uniprot.org/uniprot/P12499|https://www.uniprot.org/uniprot/P12498|https://www.uniprot.org/uniprot/P12497|https://www.uniprot.org/uniprot/P12451|https://www.uniprot.org/uniprot/P11826|https://www.uniprot.org/uniprot/P11825|https://www.uniprot.org/uniprot/P11365|https://www.uniprot.org/uniprot/P11283|https://www.uniprot.org/uniprot/P11227|https://www.uniprot.org/uniprot/P11204|https://www.uniprot.org/uniprot/P10394|https://www.uniprot.org/uniprot/P10381|https://www.uniprot.org/uniprot/P10274|https://www.uniprot.org/uniprot/P10273|https://www.uniprot.org/uniprot/P10272|https://www.uniprot.org/uniprot/P10271|https://www.uniprot.org/uniprot/P10270|https://www.uniprot.org/uniprot/P10265|https://www.uniprot.org/uniprot/P10210|https://www.uniprot.org/uniprot/P0DOI1|https://www.uniprot.org/uniprot/P0DOI0|https://www.uniprot.org/uniprot/P0C6F2|https://www.uniprot.org/uniprot/P0C211|https://www.uniprot.org/uniprot/P0C210|https://www.uniprot.org/uniprot/P09569|https://www.uniprot.org/uniprot/P09286|https://www.uniprot.org/uniprot/P08361|https://www.uniprot.org/uniprot/P07885|https://www.uniprot.org/uniprot/P05962|https://www.uniprot.org/uniprot/P05961|https://www.uniprot.org/uniprot/P05960|https://www.uniprot.org/uniprot/P05959|https://www.uniprot.org/uniprot/P05897|https://www.uniprot.org/uniprot/P05896|https://www.uniprot.org/uniprot/P05895|https://www.uniprot.org/uniprot/P04589|https://www.uniprot.org/uniprot/P04588|https://www.uniprot.org/uniprot/P04587|https://www.uniprot.org/uniprot/P04585|https://www.uniprot.org/uniprot/P04584|https://www.uniprot.org/uniprot/Q1HVC6|https://www.uniprot.org/uniprot/Q1A267|https://www.uniprot.org/uniprot/Q1A249
T3346 349-356 Protein denotes trypsin https://www.uniprot.org/uniprot/P83348|https://www.uniprot.org/uniprot/P81524|https://www.uniprot.org/uniprot/P81071|https://www.uniprot.org/uniprot/P70059|https://www.uniprot.org/uniprot/P51588|https://www.uniprot.org/uniprot/P35051|https://www.uniprot.org/uniprot/P35050|https://www.uniprot.org/uniprot/P35048|https://www.uniprot.org/uniprot/P35034|https://www.uniprot.org/uniprot/P19799|https://www.uniprot.org/uniprot/P00764|https://www.uniprot.org/uniprot/P00761|https://www.uniprot.org/uniprot/O97399
T3359 362-374 Protein denotes chymotrypsin https://www.uniprot.org/uniprot/P81521|https://www.uniprot.org/uniprot/P35002|https://www.uniprot.org/uniprot/O97398
T3362 396-399 Protein denotes ESI https://www.uniprot.org/uniprot/Q6FG74|https://www.uniprot.org/uniprot/P19957|https://www.uniprot.org/uniprot/E1P618

LitCovid-sample-PD-MAT

Id Subject Object Predicate Lexical cue
T2 814-822 http://purl.obolibrary.org/obo/MAT_0000086 denotes antennae

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T28 844-856 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylation
T29 1056-1068 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylation
T30 1073-1084 http://purl.obolibrary.org/obo/GO_0097503 denotes sialylation

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T25 844-856 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylation
T26 1056-1068 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylation
T27 1073-1084 http://purl.obolibrary.org/obo/GO_0097503 denotes sialylation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T29 844-856 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylation
T30 1056-1068 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylation
T31 1073-1084 http://purl.obolibrary.org/obo/GO_0097503 denotes sialylation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T61 0-108 Sentence denotes Fig. 2 Quantitative site-specific N-linked glycan analysis of SARS and MERS coronavirus spike glycoproteins.
T62 109-253 Sentence denotes Purified (a) MERS and b SARS S proteins were digested. Quantitative site-specific N-linked glycan analysis of a MERS and b SARS S glycoproteins.
T63 254-403 Sentence denotes Purified S proteins were digested with trypsin, chymotrypsin, alpha-lytic protease, Glu-C, and trypsin plus chymotrypsin, then analysed by LC-ESI MS.
T64 404-524 Sentence denotes Glycan compositions are based on the glycan library generated from negative-ion mass spectrometry of released N-glycans.
T65 525-876 Sentence denotes The bar graphs represent the relative quantities of each glycan group with oligomannose-type glycan series (M9 to M5; Man9GlcNAc2 to Man5GlcNAc2) (green), afucosylated and fucosylated hybrid glycans (Hybrid & F Hybrid) (dashed pink), and complex glycans grouped according to the number of antennae and presence of core fucosylation (A1 to FA4) (pink).
T66 877-926 Sentence denotes Left to right; least processed to most processed.
T67 927-988 Sentence denotes The pie charts summarise the quantification of these glycans.
T68 989-1111 Sentence denotes Additional compositional information regarding the distribution of fucosylation and sialylation can be found in SI Fig. 3.