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PMC:7253235 / 2275-3670 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
97 14-31 Species denotes novel Coronavirus Tax:2697049
98 33-42 Species denotes 2019-nCoV Tax:2697049
99 200-206 Species denotes people Tax:9606
100 655-660 Species denotes human Tax:9606
101 664-669 Species denotes human Tax:9606
102 901-916 Species denotes bat coronavirus Tax:1508220
103 948-961 Species denotes coronaviruses Tax:11118
104 976-994 Species denotes beta-coronaviruses Tax:694002
105 996-1040 Species denotes severe acute respiratory syndrome (SARS-CoV) Tax:694009
106 1045-1100 Species denotes Middle East Respiratory Syndrome Coronavirus (MERS-CoV) Tax:1335626
107 44-52 Disease denotes COVID-19 MESH:C000657245
108 145-171 Disease denotes acute respiratory syndrome MESH:D012120
109 223-231 Disease denotes infected MESH:D007239
110 297-303 Disease denotes deaths MESH:D003643
111 373-381 Disease denotes COVID-19 MESH:C000657245
112 789-798 Disease denotes pneumonia MESH:D011014
113 818-826 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 580-585 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T35 44-52 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T36 138-171 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T37 373-381 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T38 513-523 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T39 601-605 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T40 789-798 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T41 818-826 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T42 996-1029 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T43 1031-1039 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T5 136-137 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 391-394 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T7 539-540 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 655-660 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T9 664-669 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T10 689-695 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T11 855-859 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T12 901-904 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T13 1236-1241 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T14 1370-1371 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 976-980 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T24 789-798 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T20 0-346 Sentence denotes The spread of novel Coronavirus (2019-nCoV, COVID-19) shook the world with its highly virulent transmissibility, manifesting largely as a severe acute respiratory syndrome, with more than 4.3 million people confirmed to be infected—with approximately 1.3 million cases in the USA—and over 294,000 deaths worldwide at the time of this writing [1].
T21 347-590 Sentence denotes Originating in China, the COVID-19 epidemic has surpassed its predecessors in the number of hospitalizations and intensive care unit admissions required to handle an infectious process within a short period of time and of such grand scale [2].
T22 591-765 Sentence denotes The early SARS epidemic that emerged in 2002 similarly involved human-to-human transmission, with animal vectors linked to outbreaks and confirmed in laboratory isolates [3].
T23 766-935 Sentence denotes Initially described as pneumonia of unknown origin, COVID-19 is believed to be linked to bats based on its genomic similarity to known bat coronavirus BatCoV RaTG13 [4].
T24 936-1150 Sentence denotes Though most coronaviruses are mild, two beta-coronaviruses, severe acute respiratory syndrome (SARS-CoV) and Middle East Respiratory Syndrome Coronavirus (MERS-CoV), also took place within the last two decades [5].
T25 1151-1231 Sentence denotes These two unique predecessors preceded the pandemic that began in China in 2019.
T26 1232-1395 Sentence denotes The virus, originating in Wuhan, Hubei province, China, in late December, resulted in nearly 96,000 cases initially and is now considered a worldwide pandemic [6].

2_test

Id Subject Object Predicate Lexical cue
32462289-15200815-24380928 762-763 15200815 denotes 3
32462289-32015507-24380929 932-933 32015507 denotes 4
32462289-23678167-24380930 1147-1148 23678167 denotes 5
32462289-31986257-24380931 1392-1393 31986257 denotes 6