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PMC:7253235 / 14948-23075 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
508 0-6 Disease denotes Cancer MESH:D009369
509 11-19 Disease denotes COVID-19 MESH:C000657245
542 27-35 Species denotes patients Tax:9606
543 305-313 Species denotes patients Tax:9606
544 373-381 Species denotes patients Tax:9606
545 457-465 Species denotes patients Tax:9606
546 651-659 Species denotes patients Tax:9606
547 718-726 Species denotes patients Tax:9606
548 779-787 Species denotes patients Tax:9606
549 816-824 Species denotes patients Tax:9606
550 927-935 Species denotes patients Tax:9606
551 973-981 Species denotes patients Tax:9606
552 1258-1266 Species denotes patients Tax:9606
553 1302-1310 Species denotes patients Tax:9606
554 1709-1717 Species denotes patients Tax:9606
555 20-26 Disease denotes Cancer MESH:D009369
556 153-163 Disease denotes malignancy MESH:D009369
557 298-304 Disease denotes cancer MESH:D009369
558 364-372 Disease denotes COVID-19 MESH:C000657245
559 450-456 Disease denotes cancer MESH:D009369
560 531-537 Disease denotes cancer MESH:D009369
561 644-650 Disease denotes cancer MESH:D009369
562 792-798 Disease denotes cancer MESH:D009369
563 918-926 Disease denotes COVID-19 MESH:C000657245
564 987-993 Disease denotes cancer MESH:D009369
565 995-1006 Disease denotes lung cancer MESH:D008175
566 1040-1050 Disease denotes malignancy MESH:D009369
567 1089-1095 Disease denotes cancer MESH:D009369
568 1187-1192 Disease denotes death MESH:D003643
569 1251-1257 Disease denotes cancer MESH:D009369
570 1295-1301 Disease denotes cancer MESH:D009369
571 1693-1699 Disease denotes cancer MESH:D009369
572 1741-1752 Disease denotes lung cancer MESH:D008175
573 1766-1772 Disease denotes cancer MESH:D009369
593 3904-3912 Species denotes patients Tax:9606
594 4014-4022 Species denotes patients Tax:9606
595 4088-4101 Species denotes Not specified Tax:32644
596 4193-4206 Species denotes Not specified Tax:32644
597 4299-4312 Species denotes Not specified Tax:32644
598 4393-4406 Species denotes Not specified Tax:32644
599 4586-4599 Species denotes Not specified Tax:32644
600 4600-4613 Species denotes Not specified Tax:32644
601 4643-4656 Species denotes Not specified Tax:32644
602 4657-4670 Species denotes Not specified Tax:32644
603 4798-4811 Species denotes Not specified Tax:32644
604 4918-4931 Species denotes Not specified Tax:32644
605 5027-5040 Species denotes Not specified Tax:32644
606 5139-5152 Species denotes Not specified Tax:32644
607 3927-3935 Disease denotes COVID-19 MESH:C000657245
608 3961-3967 Disease denotes cancer MESH:D009369
609 3994-4003 Disease denotes Mortality MESH:D003643
610 4007-4013 Disease denotes cancer MESH:D009369
611 4716-4720 Disease denotes died MESH:D003643
615 3725-3733 Disease denotes COVID-19 MESH:C000657245
616 3747-3753 Disease denotes cancer MESH:D009369
617 3758-3780 Disease denotes cardiovascular disease MESH:D002318
623 5230-5236 Disease denotes cancer MESH:D009369
624 5238-5243 Disease denotes tumor MESH:D009369
625 5245-5263 Disease denotes malignant neoplasm MESH:D009369
626 5268-5277 Disease denotes carcinoma MESH:D009369
627 5312-5318 Disease denotes cancer MESH:D009369
632 5391-5413 Disease denotes cardiovascular disease MESH:D002318
633 5448-5462 Disease denotes cardiomyopathy MESH:D009202
634 5464-5487 Disease denotes coronary artery disease MESH:D003324
635 5493-5515 Disease denotes ischemic heart disease MESH:D003324
638 5593-5601 Species denotes patients Tax:9606
639 5687-5695 Species denotes patients Tax:9606
642 5713-5725 Disease denotes hypertension MESH:D006973
643 5727-5753 Disease denotes CVD cardiovascular disease MESH:D002318
688 1870-1878 Species denotes patients Tax:9606
689 1952-1960 Species denotes patients Tax:9606
690 2057-2065 Species denotes patients Tax:9606
691 2280-2288 Species denotes patients Tax:9606
692 2376-2384 Species denotes patients Tax:9606
693 2482-2490 Species denotes patients Tax:9606
694 2581-2589 Species denotes patients Tax:9606
695 2798-2806 Species denotes patients Tax:9606
696 2943-2951 Species denotes patients Tax:9606
697 3181-3189 Species denotes patients Tax:9606
698 3707-3715 Species denotes patients Tax:9606
699 1863-1869 Disease denotes cancer MESH:D009369
700 1945-1951 Disease denotes cancer MESH:D009369
701 1973-1982 Disease denotes infection MESH:D007239
702 2027-2036 Disease denotes infection MESH:D007239
703 2095-2120 Disease denotes small cell lung carcinoma MESH:D055752
704 2122-2127 Disease denotes NSCLC MESH:D002289
705 2212-2221 Disease denotes mortality MESH:D003643
706 2274-2279 Disease denotes NSCLC MESH:D002289
707 2345-2353 Disease denotes COVID-19 MESH:C000657245
708 2390-2395 Disease denotes NSCLC MESH:D002289
709 2475-2481 Disease denotes cancer MESH:D009369
710 2525-2536 Disease denotes Lung cancer MESH:D008175
711 2557-2563 Disease denotes cancer MESH:D009369
712 2597-2605 Disease denotes Diabetes MESH:D003920
713 2626-2668 Disease denotes cardiovascular and cerebrovascular disease MESH:D002318
714 2874-2879 Disease denotes tumor MESH:D009369
715 2957-2963 Disease denotes cancer MESH:D009369
716 2987-2995 Disease denotes COVID-19 MESH:C000657245
717 3026-3032 Disease denotes cancer MESH:D009369
718 3079-3090 Disease denotes Lung cancer MESH:D008175
719 3174-3180 Disease denotes cancer MESH:D009369
720 3250-3260 Disease denotes malignancy MESH:D009369
721 3301-3309 Disease denotes COVID-19 MESH:C000657245
722 3310-3320 Disease denotes infections MESH:D007239
723 3358-3364 Disease denotes cancer MESH:D009369
724 3440-3446 Disease denotes cancer MESH:D009369
725 3500-3508 Disease denotes COVID-19 MESH:C000657245
726 3509-3518 Disease denotes infection MESH:D007239
727 3532-3541 Disease denotes infection MESH:D007239
728 3550-3559 Disease denotes mortality MESH:D003643
729 3676-3682 Disease denotes cancer MESH:D009369
730 3689-3697 Disease denotes COVID-19 MESH:C000657245
731 3698-3706 Disease denotes infected MESH:D007239
759 6668-6672 Gene denotes HER2 Gene:2064
760 5844-5852 Species denotes patients Tax:9606
761 5886-5894 Species denotes patients Tax:9606
762 5906-5914 Species denotes patients Tax:9606
763 6203-6211 Species denotes patients Tax:9606
764 6470-6478 Species denotes patients Tax:9606
765 6566-6574 Species denotes patients Tax:9606
766 6784-6792 Species denotes patients Tax:9606
767 6905-6913 Species denotes patients Tax:9606
768 6678-6691 Chemical denotes anthracycline MESH:D018943
769 5816-5824 Disease denotes COVID-19 MESH:C000657245
770 5882-5885 Disease denotes CVD MESH:D002318
771 5899-5905 Disease denotes cancer MESH:D009369
772 5945-5959 Disease denotes cardiac injury MESH:D006331
773 6010-6019 Disease denotes mortality MESH:D003643
774 6069-6072 Disease denotes CVD MESH:D002318
775 6077-6083 Disease denotes cancer MESH:D009369
776 6307-6313 Disease denotes cancer MESH:D009369
777 6359-6371 Disease denotes hypertension MESH:D006973
778 6376-6398 Disease denotes cardiovascular disease MESH:D002318
779 6461-6469 Disease denotes COVID-19 MESH:C000657245
780 6550-6565 Disease denotes renal carcinoma MESH:C538614
781 6587-6599 Disease denotes hypertension MESH:D006973
782 6643-6657 Disease denotes cardiomyopathy MESH:D009202
783 6703-6716 Disease denotes breast cancer MESH:D001943
784 6755-6777 Disease denotes cardiovascular disease MESH:D002318
785 6927-6935 Disease denotes COVID-19 MESH:C000657245
801 7051-7059 Species denotes patients Tax:9606
802 7189-7197 Species denotes patients Tax:9606
803 7241-7249 Species denotes patients Tax:9606
804 7355-7363 Species denotes patients Tax:9606
805 7679-7687 Species denotes patients Tax:9606
806 8066-8074 Species denotes patients Tax:9606
807 7044-7050 Disease denotes cancer MESH:D009369
808 7076-7084 Disease denotes COVID-19 MESH:C000657245
809 7157-7163 Disease denotes cancer MESH:D009369
810 7298-7312 Disease denotes cardiotoxicity MESH:D066126
811 7468-7476 Disease denotes COVID-19 MESH:C000657245
812 7477-7487 Disease denotes infections MESH:D007239
813 7582-7603 Disease denotes aggressive malignancy MESH:D009369
814 7955-7961 Disease denotes Cancer MESH:D009369
815 7983-7989 Disease denotes Cancer MESH:D009369

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T26 264-269 Body_part denotes Joint http://purl.org/sig/ont/fma/fma7490
T27 995-999 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T28 1741-1745 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T29 2101-2105 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T30 2106-2110 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T31 2525-2529 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T32 3079-3083 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T33 4511-4515 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T34 5464-5479 Body_part denotes coronary artery http://purl.org/sig/ont/fma/fma49893
T35 5502-5507 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T36 6615-6623 Body_part denotes tyrosine http://purl.org/sig/ont/fma/fma82768
T37 6703-6709 Body_part denotes breast http://purl.org/sig/ont/fma/fma9601
T38 7060-7064 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T39 7714-7723 Body_part denotes stem cell http://purl.org/sig/ont/fma/fma63368
T40 7719-7723 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T19 995-999 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T20 1741-1745 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T21 2106-2110 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T22 2525-2529 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T23 3079-3083 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T24 4511-4515 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T25 5464-5479 Body_part denotes coronary artery http://purl.obolibrary.org/obo/UBERON_0001621
T26 5473-5479 Body_part denotes artery http://purl.obolibrary.org/obo/UBERON_0001637
T27 5502-5507 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T28 6703-6709 Body_part denotes breast http://purl.obolibrary.org/obo/UBERON_0000310
T29 7060-7064 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T153 0-6 Disease denotes Cancer http://purl.obolibrary.org/obo/MONDO_0004992
T154 11-19 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T155 20-26 Disease denotes Cancer http://purl.obolibrary.org/obo/MONDO_0004992
T156 298-304 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T157 364-372 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T158 450-456 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T159 531-537 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T160 644-650 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T161 792-798 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T162 918-926 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T163 987-993 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T164 995-1006 Disease denotes lung cancer http://purl.obolibrary.org/obo/MONDO_0008903
T165 1000-1006 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T166 1089-1095 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T167 1251-1257 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T168 1295-1301 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T169 1693-1699 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T170 1741-1752 Disease denotes lung cancer http://purl.obolibrary.org/obo/MONDO_0008903
T171 1746-1752 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T172 1766-1772 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T173 1863-1869 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T174 1945-1951 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T175 1973-1982 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T176 2027-2036 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T177 2091-2120 Disease denotes non-small cell lung carcinoma http://purl.obolibrary.org/obo/MONDO_0005233
T178 2095-2120 Disease denotes small cell lung carcinoma http://purl.obolibrary.org/obo/MONDO_0008433
T179 2106-2120 Disease denotes lung carcinoma http://purl.obolibrary.org/obo/MONDO_0005138
T180 2111-2120 Disease denotes carcinoma http://purl.obolibrary.org/obo/MONDO_0004993
T181 2122-2127 Disease denotes NSCLC http://purl.obolibrary.org/obo/MONDO_0005233
T182 2274-2279 Disease denotes NSCLC http://purl.obolibrary.org/obo/MONDO_0005233
T183 2345-2353 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T184 2390-2395 Disease denotes NSCLC http://purl.obolibrary.org/obo/MONDO_0005233
T185 2475-2481 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T186 2525-2536 Disease denotes Lung cancer http://purl.obolibrary.org/obo/MONDO_0008903
T187 2530-2536 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T188 2557-2563 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T189 2597-2605 Disease denotes Diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T190 2645-2668 Disease denotes cerebrovascular disease http://purl.obolibrary.org/obo/MONDO_0011057
T191 2874-2879 Disease denotes tumor http://purl.obolibrary.org/obo/MONDO_0005070
T192 2957-2963 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T193 2987-2995 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T194 3026-3032 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T195 3079-3090 Disease denotes Lung cancer http://purl.obolibrary.org/obo/MONDO_0008903
T196 3084-3090 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T197 3174-3180 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T198 3301-3309 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T199 3310-3320 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T200 3358-3364 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T201 3440-3446 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T202 3500-3508 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T203 3509-3518 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T204 3532-3541 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T205 3676-3682 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T206 3689-3697 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T207 3725-3733 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T208 3747-3753 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T209 3758-3780 Disease denotes cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T210 3927-3935 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T211 3961-3967 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T212 3974-3977 Disease denotes HTN http://purl.obolibrary.org/obo/MONDO_0005044
T213 4007-4013 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T214 5230-5236 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T215 5238-5243 Disease denotes tumor http://purl.obolibrary.org/obo/MONDO_0005070
T216 5245-5263 Disease denotes malignant neoplasm http://purl.obolibrary.org/obo/MONDO_0004992|http://purl.obolibrary.org/obo/MONDO_0006517
T218 5255-5263 Disease denotes neoplasm http://purl.obolibrary.org/obo/MONDO_0005070|http://purl.obolibrary.org/obo/MONDO_0021079
T220 5268-5277 Disease denotes carcinoma http://purl.obolibrary.org/obo/MONDO_0004993
T221 5312-5318 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T222 5391-5413 Disease denotes cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T223 5448-5462 Disease denotes cardiomyopathy http://purl.obolibrary.org/obo/MONDO_0004994
T224 5464-5487 Disease denotes coronary artery disease http://purl.obolibrary.org/obo/MONDO_0005010
T225 5473-5487 Disease denotes artery disease http://purl.obolibrary.org/obo/MONDO_0000473
T226 5493-5515 Disease denotes ischemic heart disease http://purl.obolibrary.org/obo/MONDO_0024644
T227 5502-5515 Disease denotes heart disease http://purl.obolibrary.org/obo/MONDO_0005267
T228 5709-5712 Disease denotes HTN http://purl.obolibrary.org/obo/MONDO_0005044
T229 5713-5725 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T230 5731-5753 Disease denotes cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T231 5816-5824 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T232 5899-5905 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T233 5953-5959 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T234 6077-6083 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T235 6307-6313 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T236 6359-6398 Disease denotes hypertension and cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0001302
T237 6359-6371 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T238 6376-6398 Disease denotes cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T239 6461-6469 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T240 6550-6565 Disease denotes renal carcinoma http://purl.obolibrary.org/obo/MONDO_0005206
T241 6556-6565 Disease denotes carcinoma http://purl.obolibrary.org/obo/MONDO_0004993
T242 6587-6599 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T243 6643-6657 Disease denotes cardiomyopathy http://purl.obolibrary.org/obo/MONDO_0004994
T244 6703-6716 Disease denotes breast cancer http://purl.obolibrary.org/obo/MONDO_0007254
T245 6710-6716 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T246 6755-6777 Disease denotes cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T247 6927-6935 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T248 7044-7050 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T249 7076-7084 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T250 7157-7163 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T251 7468-7476 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T252 7477-7487 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T253 7955-7961 Disease denotes Cancer http://purl.obolibrary.org/obo/MONDO_0004992
T254 7983-7989 Disease denotes Cancer http://purl.obolibrary.org/obo/MONDO_0004992

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T94 88-93 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T95 252-255 http://purl.obolibrary.org/obo/CLO_0008190 denotes Per
T96 264-269 http://purl.obolibrary.org/obo/UBERON_0000982 denotes Joint
T97 264-269 http://purl.obolibrary.org/obo/UBERON_0004905 denotes Joint
T98 492-494 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T99 701-702 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T100 873-874 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T101 913-917 http://purl.obolibrary.org/obo/CLO_0053133 denotes 1590
T102 970-972 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T103 995-999 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T104 995-999 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T105 1116-1117 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T106 1324-1325 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T107 1383-1384 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T108 1519-1521 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T109 1741-1745 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T110 1741-1745 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T111 1795-1796 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T112 1965-1966 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T113 2043-2044 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T114 2101-2105 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T115 2106-2110 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T116 2106-2110 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T117 2323-2324 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T118 2446-2447 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T119 2525-2529 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T120 2525-2529 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T121 3079-3083 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T122 3079-3083 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T123 3091-3094 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T124 3582-3583 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T125 3809-3811 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T126 4174-4176 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T127 4498-4502 http://purl.obolibrary.org/obo/CLO_0053133 denotes 1590
T128 4503-4505 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T129 4511-4515 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T130 4511-4515 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T131 4518-4524 http://purl.obolibrary.org/obo/CLO_0001409 denotes 5 (28)
T132 4899-4901 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T133 5118-5120 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T134 5171-5173 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T135 5323-5329 http://purl.obolibrary.org/obo/CLO_0001658 denotes active
T136 5473-5479 http://purl.obolibrary.org/obo/UBERON_0001637 denotes artery
T137 5473-5479 http://www.ebi.ac.uk/efo/EFO_0000814 denotes artery
T138 5502-5507 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T139 5502-5507 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T140 5502-5507 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T141 5502-5507 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T142 5854-5855 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T143 5862-5865 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T144 6129-6134 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T145 6505-6506 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T146 6703-6709 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
T147 6718-6720 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T148 7060-7064 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T149 7426-7428 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T150 7664-7666 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T151 7714-7723 http://purl.obolibrary.org/obo/CL_0000034 denotes stem cell
T152 7816-7817 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T24 1545-1550 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T25 1700-1705 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T26 2789-2794 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T27 4133-4136 Chemical denotes Guo http://purl.obolibrary.org/obo/CHEBI_16750
T28 5766-5772 Chemical denotes formal http://purl.obolibrary.org/obo/CHEBI_48341
T29 6615-6623 Chemical denotes tyrosine http://purl.obolibrary.org/obo/CHEBI_18186
T30 6678-6691 Chemical denotes anthracycline http://purl.obolibrary.org/obo/CHEBI_48120
T31 7268-7272 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T32 7705-7710 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T33 8110-8114 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T90 0-6 Phenotype denotes Cancer http://purl.obolibrary.org/obo/HP_0002664
T91 20-26 Phenotype denotes Cancer http://purl.obolibrary.org/obo/HP_0002664
T92 112-132 Phenotype denotes immune dysregulation http://purl.obolibrary.org/obo/HP_0002958
T93 298-304 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T94 450-456 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T95 531-537 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T96 644-650 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T97 792-798 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T98 987-993 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T99 995-1006 Phenotype denotes lung cancer http://purl.obolibrary.org/obo/HP_0100526
T100 1089-1095 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T101 1251-1257 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T102 1295-1301 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T103 1693-1699 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T104 1741-1752 Phenotype denotes lung cancer http://purl.obolibrary.org/obo/HP_0100526
T105 1766-1772 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T106 1863-1869 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T107 1945-1951 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T108 2091-2120 Phenotype denotes non-small cell lung carcinoma http://purl.obolibrary.org/obo/HP_0030358
T109 2122-2127 Phenotype denotes NSCLC http://purl.obolibrary.org/obo/HP_0030358
T110 2274-2279 Phenotype denotes NSCLC http://purl.obolibrary.org/obo/HP_0030358
T111 2390-2395 Phenotype denotes NSCLC http://purl.obolibrary.org/obo/HP_0030358
T112 2475-2481 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T113 2525-2536 Phenotype denotes Lung cancer http://purl.obolibrary.org/obo/HP_0100526
T114 2557-2563 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T115 2874-2879 Phenotype denotes tumor http://purl.obolibrary.org/obo/HP_0002664
T116 2957-2963 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T117 3026-3032 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T118 3079-3090 Phenotype denotes Lung cancer http://purl.obolibrary.org/obo/HP_0100526
T119 3174-3180 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T120 3358-3364 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T121 3440-3446 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T122 3676-3682 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T123 3747-3753 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T124 3758-3780 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T125 3961-3967 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T126 4007-4013 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T127 5230-5236 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T128 5238-5243 Phenotype denotes tumor http://purl.obolibrary.org/obo/HP_0002664
T129 5255-5263 Phenotype denotes neoplasm http://purl.obolibrary.org/obo/HP_0002664
T130 5268-5277 Phenotype denotes carcinoma http://purl.obolibrary.org/obo/HP_0030731
T131 5312-5318 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T132 5391-5413 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T133 5448-5462 Phenotype denotes cardiomyopathy http://purl.obolibrary.org/obo/HP_0001638
T134 5713-5725 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T135 5731-5753 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T136 5835-5843 Phenotype denotes oncology http://purl.obolibrary.org/obo/HP_0002664
T137 5899-5905 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T138 6077-6083 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T139 6307-6313 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T140 6359-6371 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T141 6376-6398 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T142 6550-6565 Phenotype denotes renal carcinoma http://purl.obolibrary.org/obo/HP_0005584
T143 6587-6599 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T144 6643-6657 Phenotype denotes cardiomyopathy http://purl.obolibrary.org/obo/HP_0001638
T145 6703-6716 Phenotype denotes breast cancer http://purl.obolibrary.org/obo/HP_0003002
T146 6755-6777 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T147 7044-7050 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T148 7157-7163 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T149 7955-7961 Phenotype denotes Cancer http://purl.obolibrary.org/obo/HP_0002664
T150 7983-7989 Phenotype denotes Cancer http://purl.obolibrary.org/obo/HP_0002664
T151 8057-8065 Phenotype denotes oncology http://purl.obolibrary.org/obo/HP_0002664

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T90 0-19 Sentence denotes Cancer and COVID-19
T91 20-251 Sentence denotes Cancer patients have shown to be at higher risk for contracting the virus likely from their immune dysregulation in setting of their malignancy and various treatments and remain at high risk for sustaining severe outcomes [19, 42].
T92 252-397 Sentence denotes Per the WHO Joint Mission Report, the CFR for cancer patients (7.6%) was higher than the overall CFR for 55,924 COVID-19 patients in China [19•].
T93 398-500 Sentence denotes Reports from Italy and Washington also support that cancer patients had similar findings [14, 22, 23].
T94 501-607 Sentence denotes However, the specific type of cancer was neither reported in these studies nor linked to specific outcome.
T95 608-700 Sentence denotes Several studies have indicated that cancer patients trend toward having more severe disease.
T96 701-872 Sentence denotes A case series of patients admitted to New York hospitals identified that 5.9% patients had cancer and 43% of these patients required invasive ventilation for support [24].
T97 873-1051 Sentence denotes A prospective cohort study of following 1590 COVID-19 patients in China demonstrated that of the 18 patients with cancer, lung cancer was the most frequently incurred malignancy.
T98 1052-1312 Sentence denotes Moreover, in this cohort, history of cancer was associated with a higher risk of severe events (ICU admission requiring ventilation or death) and faster progression to severe events (median time for cancer patients 13 days vs. 43 days for non-cancer patients).
T99 1313-1511 Sentence denotes Those with a history of chemotherapy or surgery in the past month had a higher risk for severe events even when adjusted for other risk factors including age (OR 5.34, 95% CI 1.80–16.18; p < 0.005).
T100 1512-1612 Sentence denotes Of the 18 described in the Wuhan group, roughly 10% received chemotherapy and 7.1% targeted therapy.
T101 1613-1718 Sentence denotes However, age alone was also an independent risk factor for severe events in the cancer group of patients.
T102 1719-1822 Sentence denotes Those with history of lung cancer versus other cancer types did not predict a more severe outcome [42].
T103 1823-2042 Sentence denotes Another study from China evaluating all cancer patients admitted to Zhongnan Hospital of Wuhan University determined that cancer patients had a 0.79% infection rate compared with the overall city’s 0.37% infection rate.
T104 2043-2259 Sentence denotes A total of 12 patients were affected, 58.3% had non-small cell lung carcinoma (NSCLC) with approximately 41.7% were undergoing treatment with chemotherapy and resulting mortality rate as of March 10, 2020, being 25%.
T105 2260-2402 Sentence denotes Additionally, NSCLC patients that were greater than age 60 had a higher incidence of COVID-19 compared with younger patients with NSCLC [43•].
T106 2403-2524 Sentence denotes These findings are further corroborated by a study that examined all 28 cancer patients admitted to 3 hospitals in China.
T107 2525-2596 Sentence denotes Lung cancer was the most common cancer type among these patients (25%).
T108 2597-2719 Sentence denotes Diabetes (14.3%) and chronic cardiovascular and cerebrovascular disease (14.3%) were the most common comorbidities listed.
T109 2720-2915 Sentence denotes Clinical factors that significantly predicted worse outcomes in this group of patients included age, patchy consolidation on imaging, and receipt of anti-tumor treatment in the last 14 days [44].
T110 2916-3078 Sentence denotes These studies suggest that patients with cancer are at higher risk for COVID-19, and those with older age and cancer are at an even higher risk for poor outcomes.
T111 3079-3321 Sentence denotes Lung cancer has been reported to be more common in these studies, but the total sample size of cancer patients remains too low to draw any meaningful conclusions on which malignancy may be most associated with severity of COVID-19 infections.
T112 3322-3560 Sentence denotes Lastly, although having recent anti-cancer treatment increases the risk for severe outcomes, it is unclear which anti-cancer agents are associated with higher risk for acquiring COVID-19 infection, severity of infection, and/or mortality.
T113 3561-3716 Sentence denotes Table 1 demonstrates a literature review of studies published until April 26, 2020 that identify the prevalence of cancer among COVID-19 infected patients.
T114 3717-3818 Sentence denotes Table 1 COVID-19 Studies with cancer and cardiovascular disease epidemiology (through April 22, 2020)
T115 3819-4028 Sentence denotes Author Country Clinical setting Number of institutions Date of publication Number of patients in study with COVID-19 Canceran (%) Predominant cancer n (%) HTN n (%) CVDbn (%) Mortality in cancer patients n (%)
T116 4029-4041 Sentence denotes Wu C, et al.
T117 4042-4132 Sentence denotes China Hospitalized 1 March 13,2020 201 1(0.5) Not specified 39 (19.4) 8 (4.0) Not reported
T118 4133-4146 Sentence denotes Guo T, et al.
T119 4147-4239 Sentence denotes China Hospitalized 1 March 27, 2020 187 13(7) Not specified 61 (32.6) 29 (15.5) Not reported
T120 4240-4254 Sentence denotes Zhou F, et al.
T121 4255-4331 Sentence denotes China Hospitalized 2 March 9, 2020 191 2(1) Not specified 58 (30.4) 15 (8) 0
T122 4332-4345 Sentence denotes Shi S, et al.
T123 4346-4440 Sentence denotes China Hospitalized 1 March 25, 2020 416 9(2.2) Not specified 127 (30.5) 61 (14.7) Not reported
T124 4441-4456 Sentence denotes Liang W, et al.
T125 4457-4563 Sentence denotes China Hospitalized 575 February 14, 2020 1590 18(1.1) Lung - 5 (28) Not reported Not reported Not reported
T126 4564-4579 Sentence denotes Onder G, et al.
T127 4580-4721 Sentence denotes Italy Not specified Not specified March 23, 2020 355 72 (20.3) Not specified Not specified 117 (33) 100 (Study only reviewed cases that died)
T128 4722-4842 Sentence denotes Grasselli G, et al.c Italy Intensive care units 72 April 6, 2020 1043 81(8) Not specified 509 (49) 223 (21) Not reported
T129 4843-4862 Sentence denotes McMichael T, et al.
T130 4863-4964 Sentence denotes USA Long-term care facility 1 March 27, 2020 167 15(9) Not specified 74 (44.3) 68 (40.7) Not reported
T131 4965-4980 Sentence denotes Goyal P, et al.
T132 4981-5072 Sentence denotes USA Hospitalized 2 April 17, 2020 393 23(5.9) Not specified 197 (50.1) 82 (21) Not reported
T133 5073-5091 Sentence denotes Richardson, et al.
T134 5092-5188 Sentence denotes USA Hospitalized 17 April 22, 2020 5700 320(6) Not specified 3026 (56.6)c 966 (18)d Not reported
T135 5189-5278 Sentence denotes aCancer was defined in studies as either cancer, tumor, malignant neoplasm, or carcinoma.
T136 5279-5345 Sentence denotes There was variability in whether cancer was active or in remission
T137 5346-5515 Sentence denotes bThere were various definitions utilized for cardiovascular disease across all studies not limited to cardiomyopathy, coronary artery disease, and ischemic heart disease
T138 5516-5708 Sentence denotes c,dHistory regarding these comorbidities may not have been available for all patients enrolled in the study; hence, percentage does not correlate the with total number of patients in the study
T139 5709-5753 Sentence denotes HTN hypertension, CVD cardiovascular disease
T140 5754-6025 Sentence denotes Although no formal studies have assessed the direct impact of COVID-19 on cardio-oncology patients, a study has shown that both CVD patients and cancer patients do have an increased risk for cardiac injury which in of itself is an independent predictor of mortality [28].
T141 6026-6279 Sentence denotes Additionally, since the data suggests that CVD and cancer are potentially independent risk factors for virus acquisition and severe outcomes, it is reasonable to assume that if patients have both risk factors, then they may posit higher cumulative risk.
T142 6280-6485 Sentence denotes There is also concern that cancer treatments may induce disease states such as hypertension and cardiovascular disease—both frequently associated risk factors for worse outcomes in COVID-19 patients [19•].
T143 6486-6726 Sentence denotes An example of such a clinical scenario could involve metastatic renal carcinoma patients who develop hypertension from anti-VEGF tyrosine kinase therapy, or cardiomyopathy from anti-HER2, and anthracycline therapy of breast cancer [45, 46].
T144 6727-7020 Sentence denotes However, the definition of “cardiovascular disease” that patients have been classified with in these studies is not always clearly delineated; thus, risk stratification of these patients in regard to COVID-19 risk requires more refined investigation and long-term follow-up regarding outcomes.
T145 7021-7116 Sentence denotes The elevated risk that cancer patients face during the COVID-19 pandemic poses many challenges.
T146 7117-7430 Sentence denotes Some of these include providing ongoing cancer treatments especially if patients are undergoing curative therapy, enrolling patients into experimental drug trials, continuing close cardiotoxicity surveillance, and providing treatments to patients who have an optimal window of adequate functional status [47, 48].
T147 7431-7668 Sentence denotes Given concerns for hospital-acquired COVID-19 infections, this additional risk factor can impact continuation of therapy or initiation of regimens for aggressive malignancy that require hospitalization for closer monitoring [43, 47, 48].
T148 7669-7887 Sentence denotes Moreover, patients that may rely on drugs or stem cell donations for treatment may necessitate access to unique global sources and are rendered at a disadvantage due to travel restrictions and quarantine policies [49].
T149 7888-8127 Sentence denotes In response to these climactic changes, The National Comprehensive Cancer Network and National Cancer Institute have provided guidance to providers on providing care to oncology patients, resource allocation, and managing drug trials [50].

2_test

Id Subject Object Predicate Lexical cue
32462289-32066541-24380944 247-249 32066541 denotes 42
32462289-32220208-24380945 496-498 32220208 denotes 23
32462289-32066541-24380946 1818-1820 32066541 denotes 42
32462289-27732808-24380947 6722-6724 27732808 denotes 46
32462289-32213339-24380948 7883-7885 32213339 denotes 49