PMC:7252096 / 25956-26277 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/7252096","sourcedb":"PMC","sourceid":"7252096","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7252096","text":"(A). Top: tSNE projection of all cells from healthy pediatric human ileum within a previously-unpublished 10x 3′ v2 dataset (115,569 cells). Black: higher expression of ACE2 (left), TMPRSS2 (right). Bottom: Corresponding violin plots of expression values for ACE2 (left) and TMPRSS2 (right). Solid line: epithelial cells.","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T313","span":{"begin":33,"end":38},"obj":"Body_part"},{"id":"T314","span":{"begin":68,"end":73},"obj":"Body_part"},{"id":"T315","span":{"begin":113,"end":115},"obj":"Body_part"},{"id":"T317","span":{"begin":133,"end":138},"obj":"Body_part"},{"id":"T318","span":{"begin":304,"end":320},"obj":"Body_part"},{"id":"T319","span":{"begin":315,"end":320},"obj":"Body_part"}],"attributes":[{"id":"A313","pred":"fma_id","subj":"T313","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A314","pred":"fma_id","subj":"T314","obj":"http://purl.org/sig/ont/fma/fma7208"},{"id":"A315","pred":"fma_id","subj":"T315","obj":"http://purl.org/sig/ont/fma/fma13443"},{"id":"A316","pred":"fma_id","subj":"T315","obj":"http://purl.org/sig/ont/fma/fma68615"},{"id":"A317","pred":"fma_id","subj":"T317","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A318","pred":"fma_id","subj":"T318","obj":"http://purl.org/sig/ont/fma/fma66768"},{"id":"A319","pred":"fma_id","subj":"T319","obj":"http://purl.org/sig/ont/fma/fma68646"},{"subj":"T313","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T314","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T315","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T317","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T318","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T319","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T52","span":{"begin":68,"end":73},"obj":"Body_part"}],"attributes":[{"id":"A52","pred":"uberon_id","subj":"T52","obj":"http://purl.obolibrary.org/obo/UBERON_0002116"},{"subj":"T52","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T32257","span":{"begin":1,"end":2},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T13453","span":{"begin":33,"end":38},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T98229","span":{"begin":62,"end":67},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T85540","span":{"begin":68,"end":73},"obj":"http://purl.obolibrary.org/obo/UBERON_0002116"},{"id":"T33298","span":{"begin":81,"end":82},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T98131","span":{"begin":133,"end":138},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T94550","span":{"begin":304,"end":314},"obj":"http://purl.obolibrary.org/obo/CL_0000066"},{"id":"T88352","span":{"begin":315,"end":320},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"attributes":[{"subj":"T32257","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T13453","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T98229","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T85540","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T33298","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T98131","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T94550","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T88352","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T158","span":{"begin":0,"end":4},"obj":"Sentence"},{"id":"T159","span":{"begin":5,"end":140},"obj":"Sentence"},{"id":"T160","span":{"begin":141,"end":198},"obj":"Sentence"},{"id":"T161","span":{"begin":199,"end":206},"obj":"Sentence"},{"id":"T162","span":{"begin":207,"end":291},"obj":"Sentence"},{"id":"T163","span":{"begin":292,"end":321},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T158","pred":"source","obj":"LitCovid-sentences"},{"subj":"T159","pred":"source","obj":"LitCovid-sentences"},{"subj":"T160","pred":"source","obj":"LitCovid-sentences"},{"subj":"T161","pred":"source","obj":"LitCovid-sentences"},{"subj":"T162","pred":"source","obj":"LitCovid-sentences"},{"subj":"T163","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"681","span":{"begin":169,"end":173},"obj":"Gene"},{"id":"682","span":{"begin":182,"end":189},"obj":"Gene"},{"id":"683","span":{"begin":259,"end":263},"obj":"Gene"},{"id":"684","span":{"begin":275,"end":282},"obj":"Gene"},{"id":"685","span":{"begin":62,"end":67},"obj":"Species"}],"attributes":[{"id":"A681","pred":"tao:has_database_id","subj":"681","obj":"Gene:59272"},{"id":"A682","pred":"tao:has_database_id","subj":"682","obj":"Gene:7113"},{"id":"A683","pred":"tao:has_database_id","subj":"683","obj":"Gene:59272"},{"id":"A684","pred":"tao:has_database_id","subj":"684","obj":"Gene:7113"},{"id":"A685","pred":"tao:has_database_id","subj":"685","obj":"Tax:9606"},{"subj":"681","pred":"source","obj":"LitCovid-PubTator"},{"subj":"682","pred":"source","obj":"LitCovid-PubTator"},{"subj":"683","pred":"source","obj":"LitCovid-PubTator"},{"subj":"684","pred":"source","obj":"LitCovid-PubTator"},{"subj":"685","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#ec93bb","default":true},{"id":"LitCovid-PD-UBERON","color":"#93d5ec"},{"id":"LitCovid-PD-CLO","color":"#ece893"},{"id":"LitCovid-sentences","color":"#ce93ec"},{"id":"LitCovid-PubTator","color":"#93ecb4"}]}]}}