PMC:7252096 / 127783-128160
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7252096","sourcedb":"PMC","sourceid":"7252096","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7252096","text":"Statistics and Gene Lists Related to STAR Methods and Figure S1 (NHP Tuberculosis Infected Lung and Granuloma) A. Cluster defining genes for cell types presented in Figure S1 B. ACE2 and TMPRSS2 statistics by cell type C. Abundances of ACE2+TMPRSS2+ cells by cell type and tissue of origin D. Differentially expressed genes between ACE2+TMPRSS2+ versus rest Type II Pneumocytes","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T250","span":{"begin":15,"end":19},"obj":"Body_part"},{"id":"T251","span":{"begin":91,"end":95},"obj":"Body_part"},{"id":"T252","span":{"begin":141,"end":145},"obj":"Body_part"},{"id":"T253","span":{"begin":209,"end":213},"obj":"Body_part"},{"id":"T254","span":{"begin":250,"end":255},"obj":"Body_part"},{"id":"T255","span":{"begin":259,"end":263},"obj":"Body_part"},{"id":"T256","span":{"begin":273,"end":279},"obj":"Body_part"},{"id":"T257","span":{"begin":366,"end":377},"obj":"Body_part"}],"attributes":[{"id":"A250","pred":"fma_id","subj":"T250","obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"A251","pred":"fma_id","subj":"T251","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A252","pred":"fma_id","subj":"T252","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A253","pred":"fma_id","subj":"T253","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A254","pred":"fma_id","subj":"T254","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A255","pred":"fma_id","subj":"T255","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A256","pred":"fma_id","subj":"T256","obj":"http://purl.org/sig/ont/fma/fma9637"},{"id":"A257","pred":"fma_id","subj":"T257","obj":"http://purl.org/sig/ont/fma/fma62499"},{"subj":"T250","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T251","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T252","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T253","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T254","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T255","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T256","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T257","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T275","span":{"begin":91,"end":95},"obj":"Body_part"},{"id":"T276","span":{"begin":273,"end":279},"obj":"Body_part"}],"attributes":[{"id":"A275","pred":"uberon_id","subj":"T275","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A276","pred":"uberon_id","subj":"T276","obj":"http://purl.obolibrary.org/obo/UBERON_0000479"},{"subj":"T275","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T276","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T382","span":{"begin":37,"end":41},"obj":"Disease"},{"id":"T383","span":{"begin":69,"end":81},"obj":"Disease"}],"attributes":[{"id":"A382","pred":"mondo_id","subj":"T382","obj":"http://purl.obolibrary.org/obo/MONDO_0010408"},{"id":"A383","pred":"mondo_id","subj":"T383","obj":"http://purl.obolibrary.org/obo/MONDO_0018076"},{"subj":"T382","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T383","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T385","span":{"begin":15,"end":19},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T386","span":{"begin":61,"end":63},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T387","span":{"begin":91,"end":95},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T388","span":{"begin":91,"end":95},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T389","span":{"begin":111,"end":112},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T390","span":{"begin":131,"end":136},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T391","span":{"begin":141,"end":151},"obj":"http://purl.obolibrary.org/obo/CL_0000000"},{"id":"T392","span":{"begin":172,"end":174},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T393","span":{"begin":175,"end":176},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T394","span":{"begin":209,"end":218},"obj":"http://purl.obolibrary.org/obo/CL_0000000"},{"id":"T395","span":{"begin":250,"end":255},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T396","span":{"begin":259,"end":268},"obj":"http://purl.obolibrary.org/obo/CL_0000000"},{"id":"T397","span":{"begin":318,"end":323},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"}],"attributes":[{"subj":"T385","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T386","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T387","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T388","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T389","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T390","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T391","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T392","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T393","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T394","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T395","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T396","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T397","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T45331","span":{"begin":363,"end":365},"obj":"Chemical"}],"attributes":[{"id":"A78985","pred":"chebi_id","subj":"T45331","obj":"http://purl.obolibrary.org/obo/CHEBI_74067"},{"subj":"T45331","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T906","span":{"begin":0,"end":113},"obj":"Sentence"},{"id":"T907","span":{"begin":114,"end":177},"obj":"Sentence"},{"id":"T908","span":{"begin":178,"end":221},"obj":"Sentence"},{"id":"T909","span":{"begin":222,"end":292},"obj":"Sentence"},{"id":"T910","span":{"begin":293,"end":377},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T906","pred":"source","obj":"LitCovid-sentences"},{"subj":"T907","pred":"source","obj":"LitCovid-sentences"},{"subj":"T908","pred":"source","obj":"LitCovid-sentences"},{"subj":"T909","pred":"source","obj":"LitCovid-sentences"},{"subj":"T910","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T25","span":{"begin":100,"end":109},"obj":"Phenotype"}],"attributes":[{"id":"A25","pred":"hp_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/HP_0032252"},{"subj":"T25","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"2119","span":{"begin":37,"end":41},"obj":"Gene"}],"attributes":[{"id":"A2119","pred":"tao:has_database_id","subj":"2119","obj":"Gene:6770"},{"subj":"2119","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#ec93a4","default":true},{"id":"LitCovid-PD-UBERON","color":"#93beec"},{"id":"LitCovid-PD-MONDO","color":"#d8ec93"},{"id":"LitCovid-PD-CLO","color":"#e693ec"},{"id":"LitCovid-PD-CHEBI","color":"#93eccc"},{"id":"LitCovid-sentences","color":"#ecb293"},{"id":"LitCovid-PD-HP","color":"#9893ec"},{"id":"LitCovid-PubTator","color":"#a7ec93"}]}]}}