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PMC:7252096 / 11375-11716 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T92961 43-47 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T78907 48-54 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T68232 170-172 Body_part denotes v1 http://purl.org/sig/ont/fma/fma13444|http://purl.org/sig/ont/fma/fma68614
T20260 213-217 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T30494 283-288 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T63361 308-312 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T25 43-47 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T26 48-54 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T86 327-331 Disease denotes STAR http://purl.obolibrary.org/obo/MONDO_0010408

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T59631 1-2 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T79845 43-47 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T77319 43-47 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T56107 84-89 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T41263 90-98 http://purl.obolibrary.org/obo/NCBITaxon_9443 denotes primates
T54356 213-223 http://purl.obolibrary.org/obo/CL_0000000 denotes cell types
T37269 283-288 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T88766 308-312 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T63 0-250 Sentence denotes (A) Schematic of protocol for isolation of lung tissue at necropsy from healthy non-human primates (M. mulatta, n = 3), creation of scRNA-seq libraries by using Seq-Well v1, and computational analysis to identify cell types by using unbiased methods.
T64 251-341 Sentence denotes UMAP projection of 3,793 single cells, points colored by cell identity (see STAR Methods).

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
323 327-331 Gene denotes STAR Gene:6770
324 84-89 Species denotes human Tax:9606
325 100-110 Species denotes M. mulatta Tax:9544