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PMC:7247521 / 993-1888 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
29 155-161 Gene denotes MIR183 Gene:406959
30 172-176 Gene denotes CDK7 Gene:1022
31 263-267 Gene denotes ACE2 Gene:59272
32 667-676 Gene denotes X2 and O2
34 784-793 Species denotes 2019-nCov Tax:2697049
38 423-428 Chemical denotes ADMET
40 49-61 Disease denotes TTD diseases MESH:D003141
41 71-92 Disease denotes inflammatory diseases MESH:D007249
42 94-100 Disease denotes asthma MESH:D001249
43 102-139 Disease denotes chronic obstructive pulmonary Disease MESH:D029424
44 249-258 Disease denotes pneumonia MESH:D011014
45 862-870 Disease denotes COVID-19 MESH:C000657245

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T23 122-131 UBERON:0002048 denotes pulmonary
T24 148-153 SO:0000276 denotes miRNA
T25 172-176 PR:000005265 denotes CDK7
T26 263-267 G_3;PG_10;PR:000003622 denotes ACE2
T27 271-281 GO:0010467 denotes expression
T28 456-465 CHEBI:36357;CHEBI:36357 denotes compounds
T29 520-524 CHEBI:23888;CHEBI:23888 denotes drug
T30 549-565 UBERON:0001555 denotes gastrointestinal
T31 674-676 CHEBI:15379;CHEBI:15379 denotes O2
T32 784-793 SP_7 denotes 2019-nCov
T33 841-845 CHEBI:23888;CHEBI:23888 denotes drug
T34 862-870 SP_7 denotes COVID-19

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T2 282-290 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T3 822-830 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T6 71-92 Disease denotes inflammatory diseases http://purl.obolibrary.org/obo/MONDO_0021166
T7 94-100 Disease denotes asthma http://purl.obolibrary.org/obo/MONDO_0004979
T8 102-139 Disease denotes chronic obstructive pulmonary Disease http://purl.obolibrary.org/obo/MONDO_0005002
T9 249-258 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T10 862-870 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T8 23-32 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T9 390-396 http://purl.obolibrary.org/obo/CLO_0001658 denotes active
T10 534-538 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T11 663-665 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T12 704-707 http://purl.obolibrary.org/obo/CLO_0007875 denotes MS1
T13 704-707 http://purl.obolibrary.org/obo/CLO_0052410 denotes MS1

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T4 49-52 Chemical denotes TTD http://purl.obolibrary.org/obo/CHEBI_73659
T5 182-184 Chemical denotes TF http://purl.obolibrary.org/obo/CHEBI_74862
T6 282-290 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T7 520-524 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T8 659-661 Chemical denotes M3 http://purl.obolibrary.org/obo/CHEBI_51083|http://purl.obolibrary.org/obo/CHEBI_53453
T10 674-676 Chemical denotes O2 http://purl.obolibrary.org/obo/CHEBI_15379
T11 822-830 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T12 841-845 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 94-100 Phenotype denotes asthma http://purl.obolibrary.org/obo/HP_0002099
T2 102-139 Phenotype denotes chronic obstructive pulmonary Disease http://purl.obolibrary.org/obo/HP_0006510
T3 249-258 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T10 9-40 http://purl.obolibrary.org/obo/GO_0033211 denotes adipocytokine signaling pathway
T11 9-40 http://purl.obolibrary.org/obo/GO_0033210 denotes adipocytokine signaling pathway
T12 9-40 http://purl.obolibrary.org/obo/GO_0033209 denotes adipocytokine signaling pathway
T13 23-40 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T14 23-32 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T15 182-184 http://purl.obolibrary.org/obo/GO_0000981 denotes TF

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T13 192-291 Sentence denotes QFPD contained 257 specific targets in addition to HCoV, pneumonia and ACE2 co-expression proteins.
T14 292-409 Sentence denotes Then, network topology analysis of the five components-target-pathway-disease networks yielded 67 active ingredients.
T15 410-624 Sentence denotes In addition, ADMET estimations showed that 20 compounds passed the stringent lead-like criteria and in silico drug-likeness test with high gastrointestinal absorption and the median lethal dose (LD50 > 1600 mg/kg).
T16 625-831 Sentence denotes Moreover, 4 specific ingredients (M3, S1, X2 and O2) and 5 common ingredients (MS1, MX16, SX1, WO1 and XO1) of QFPD presented good molecular docking score for 2019-nCov structure and non-structure proteins.

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T1 720-723 GlycoEpitope denotes WO1 http://www.glycoepitope.jp/epitopes/AN0690