PMC:7247521 / 8572-9254
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 132 | 474-513 | Gene | denotes | Kyoto Encyclopedia of Genes and Genomes | |
| 133 | 284-296 | Species | denotes | Homo sapiens | Tax:9606 |
| 134 | 103-106 | Disease | denotes | XCH | |
| 135 | 627-630 | Disease | denotes | XCH |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T90 | 23-38 | CHEBI:52217;CHEBI:52217 | denotes | pharmacological |
| T91 | 264-271 | NCBITaxon:species | denotes | species |
| T92 | 284-296 | SP_6;NCBITaxon:9606 | denotes | Homo sapiens |
| T93 | 365-372 | SO:0000417 | denotes | modules |
| T94 | 496-501 | SO:0000704 | denotes | Genes |
| T95 | 506-513 | SO:0001026 | denotes | Genomes |
| T96 | 604-611 | SO:0000417 | denotes | modules |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T11 | 183-191 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T12 | 506-513 | Body_part | denotes | Genomes | http://purl.org/sig/ont/fma/fma84116 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T61 | 284-296 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | Homo sapiens |
| T62 | 326-327 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T63 | 496-501 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | Genes |
| T64 | 515-524 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signaling |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T32 | 56-59 | Chemical | denotes | PPI | http://purl.obolibrary.org/obo/CHEBI_53266|http://purl.obolibrary.org/obo/CHEBI_60614 |
| T34 | 131-134 | Chemical | denotes | PPI | http://purl.obolibrary.org/obo/CHEBI_53266|http://purl.obolibrary.org/obo/CHEBI_60614 |
| T36 | 183-191 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T37 | 241-244 | Chemical | denotes | PPI | http://purl.obolibrary.org/obo/CHEBI_53266|http://purl.obolibrary.org/obo/CHEBI_60614 |
| T39 | 376-379 | Chemical | denotes | PPI | http://purl.obolibrary.org/obo/CHEBI_53266|http://purl.obolibrary.org/obo/CHEBI_60614 |
| T41 | 655-658 | Chemical | denotes | PPI | http://purl.obolibrary.org/obo/CHEBI_53266|http://purl.obolibrary.org/obo/CHEBI_60614 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26 | 515-532 | http://purl.obolibrary.org/obo/GO_0007165 | denotes | signaling pathway |
| T27 | 515-524 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T55 | 0-143 | Sentence | denotes | To further explore the pharmacological mechanisms, five PPI networks were built including: MSXG, SGMH, XCH, WLS and Others targets PPI network. |
| T56 | 144-298 | Sentence | denotes | Specifically, the five kinds of target proteins were respectively uploaded to Metascape to build PPI networks, with the species limited to “Homo sapiens”. |
| T57 | 299-458 | Sentence | denotes | Next, MCODE analysis [19], a method for finding densely connected modules in PPI networks, was carried out by Cytoscape 3.2.1 (http://www.cytoscape.org/) [20]. |
| T58 | 459-682 | Sentence | denotes | Finally, KEGG (Kyoto Encyclopedia of Genes and Genomes) signaling pathway enrichment analysis was further conducted on the identified functional modules of MSXG, SGMH, XCH, WLS and Others targets PPI networks, respectively. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32554251-12525261-6393498 | 321-323 | 12525261 | denotes | 19 |
| 32554251-14597658-6393499 | 454-456 | 14597658 | denotes | 20 |