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PMC:7247521 / 38626-39411 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
633 27-61 Gene denotes MXO1 SO1 SX1 WO1 XO1 Main Protease
634 169-173 Gene denotes RdRp Gene:43740578
635 224-228 Gene denotes RdRp Gene:43740578
636 284-292 Gene denotes Helicase Gene:164045
637 347-355 Gene denotes Helicase Gene:164045

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T148 179-182 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T149 237-240 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T150 416-420 Body_part denotes ExoN http://purl.org/sig/ont/fma/fma84120
T151 660-667 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T152 720-727 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T329 9-12 http://purl.obolibrary.org/obo/CLO_0007875 denotes MS1
T330 9-12 http://purl.obolibrary.org/obo/CLO_0052410 denotes MS1

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T325 293-296 Chemical denotes ADP http://purl.obolibrary.org/obo/CHEBI_16761|http://purl.obolibrary.org/obo/CHEBI_456216|http://purl.obolibrary.org/obo/CHEBI_73342
T328 660-667 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T329 720-727 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T330 728-731 Chemical denotes ion http://purl.obolibrary.org/obo/CHEBI_24870

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T103 728-739 http://purl.obolibrary.org/obo/GO_0022831 denotes ion channel

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T286 0-47 Sentence denotes Molecule MS1 MX16 MX17 MX8 MXO1 SO1 SX1 WO1 XO1
T287 48-104 Sentence denotes Main Protease −7.6 −7 −7.8 −7.8 −7.8 −7.2 −7.1 −7.4 −7.4
T288 105-168 Sentence denotes Papain-like protease −8 −8.2 −8.1 −8.1 −8.2 −8.2 −9.2 −8.7 −8.3
T289 169-223 Sentence denotes RdRp with RNA −8.6 −8 −7.9 −7.9 −8 −8.4 −8.2 −8.8 −9.5
T290 224-283 Sentence denotes RdRp without RNA −7.1 −6.8 −6.8 −6.8 −7 −7.1 −6.9 −7.5 −7.1
T291 284-346 Sentence denotes Helicase ADP site −6.2 −6.5 −6.3 −6.1 −6.2 −6.4 −6.8 −6.2 −6.8
T292 347-409 Sentence denotes Helicase NCB site −7.4 −7.1 −7.2 −7.2 −7.5 −7.5 −7.4 −7.6 −7.5
T293 410-464 Sentence denotes Nsp14(ExoN) −7.2 −6.6 −6.6 −6.7 −6.9 −7 −6.9 −7.1 −7.1
T294 465-525 Sentence denotes Nsp14(N7-MTase) −8.6 −8.3 −8.4 −8.3 −8.6 −8.3 −9.4 −8.7 −8.7
T295 526-594 Sentence denotes Nsp15(endoribonuclease) −6.2 −6.8 −6.4 −6.4 −6.3 −6.5 −6.8 −6.4 −6.6
T296 595-657 Sentence denotes Nsp16(2′-O-MTase) −8.1 −7.4 −7.6 −7.8 −7.8 −8.3 −7.7 −8.4 −8.2
T297 658-717 Sentence denotes N protein NCB site −8.1 −7.9 −8 −8 −7.6 −7.8 −7.5 −7.7 −7.9
T298 718-785 Sentence denotes E protein(ion channel) −6.4 −6.9 −7.2 −7.2 −6.9 −6.9 −7.9 −6.8 −6.8

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T8 40-43 GlycoEpitope denotes WO1 http://www.glycoepitope.jp/epitopes/AN0690