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PMC:7247521 / 38545-39448 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
633 108-142 Gene denotes MXO1 SO1 SX1 WO1 XO1 Main Protease
634 250-254 Gene denotes RdRp Gene:43740578
635 305-309 Gene denotes RdRp Gene:43740578
636 365-373 Gene denotes Helicase Gene:164045
637 428-436 Gene denotes Helicase Gene:164045
639 61-70 Species denotes 2019-nCov Tax:2697049
641 888-891 Disease denotes XCH

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T581 61-70 SP_7 denotes 2019-nCov

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T147 71-79 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T148 260-263 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T149 318-321 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T150 497-501 Body_part denotes ExoN http://purl.org/sig/ont/fma/fma84120
T151 741-748 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T152 801-808 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T329 90-93 http://purl.obolibrary.org/obo/CLO_0007875 denotes MS1
T330 90-93 http://purl.obolibrary.org/obo/CLO_0052410 denotes MS1

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T324 71-79 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T325 374-377 Chemical denotes ADP http://purl.obolibrary.org/obo/CHEBI_16761|http://purl.obolibrary.org/obo/CHEBI_456216|http://purl.obolibrary.org/obo/CHEBI_73342
T328 741-748 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T329 801-808 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T330 809-812 Chemical denotes ion http://purl.obolibrary.org/obo/CHEBI_24870

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T103 809-820 http://purl.obolibrary.org/obo/GO_0022831 denotes ion channel

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T285 0-80 Sentence denotes Table 5 Docking score between common ingredients of QFPD and 2019-nCov proteins.
T286 81-128 Sentence denotes Molecule MS1 MX16 MX17 MX8 MXO1 SO1 SX1 WO1 XO1
T287 129-185 Sentence denotes Main Protease −7.6 −7 −7.8 −7.8 −7.8 −7.2 −7.1 −7.4 −7.4
T288 186-249 Sentence denotes Papain-like protease −8 −8.2 −8.1 −8.1 −8.2 −8.2 −9.2 −8.7 −8.3
T289 250-304 Sentence denotes RdRp with RNA −8.6 −8 −7.9 −7.9 −8 −8.4 −8.2 −8.8 −9.5
T290 305-364 Sentence denotes RdRp without RNA −7.1 −6.8 −6.8 −6.8 −7 −7.1 −6.9 −7.5 −7.1
T291 365-427 Sentence denotes Helicase ADP site −6.2 −6.5 −6.3 −6.1 −6.2 −6.4 −6.8 −6.2 −6.8
T292 428-490 Sentence denotes Helicase NCB site −7.4 −7.1 −7.2 −7.2 −7.5 −7.5 −7.4 −7.6 −7.5
T293 491-545 Sentence denotes Nsp14(ExoN) −7.2 −6.6 −6.6 −6.7 −6.9 −7 −6.9 −7.1 −7.1
T294 546-606 Sentence denotes Nsp14(N7-MTase) −8.6 −8.3 −8.4 −8.3 −8.6 −8.3 −9.4 −8.7 −8.7
T295 607-675 Sentence denotes Nsp15(endoribonuclease) −6.2 −6.8 −6.4 −6.4 −6.3 −6.5 −6.8 −6.4 −6.6
T296 676-738 Sentence denotes Nsp16(2′-O-MTase) −8.1 −7.4 −7.6 −7.8 −7.8 −8.3 −7.7 −8.4 −8.2
T297 739-798 Sentence denotes N protein NCB site −8.1 −7.9 −8 −8 −7.6 −7.8 −7.5 −7.7 −7.9
T298 799-866 Sentence denotes E protein(ion channel) −6.4 −6.9 −7.2 −7.2 −6.9 −6.9 −7.9 −6.8 −6.8
T299 867-895 Sentence denotes M: MXSG, S: SGMH, X: XCH, O:
T300 896-903 Sentence denotes Others.

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T8 121-124 GlycoEpitope denotes WO1 http://www.glycoepitope.jp/epitopes/AN0690