PMC:7247521 / 34809-35288
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 512 | 332-336 | Gene | denotes | RdRp | Gene:43740578 |
| 513 | 369-373 | Gene | denotes | RdRp | Gene:43740578 |
| 514 | 104-112 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 515 | 417-420 | Disease | denotes | XCH | |
| 516 | 435-438 | Disease | denotes | XCH | |
| 517 | 464-467 | Disease | denotes | XCH |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T431 | 68-77 | CHEBI:36357;CHEBI:36357 | denotes | compounds |
| T432 | 104-112 | SP_7 | denotes | COVID-19 |
| T433 | 134-143 | PG_4 | denotes | N protein |
| T434 | 157-160 | PR:Q8K4K7 | denotes | MS1 |
| T435 | 165-170 | PR:000000125 | denotes | nsp14 |
| T436 | 191-196 | PR:000000125 | denotes | nsp15 |
| T437 | 220-223 | PR:P19339 | denotes | SX1 |
| T438 | 228-233 | PR:000000125 | denotes | nsp14 |
| T439 | 249-252 | PR:P19339 | denotes | SX1 |
| T440 | 257-262 | PR:000000125 | denotes | nsp15 |
| T441 | 294-299 | PR:000000125 | denotes | nsp16 |
| T442 | 325-330 | PR:000000125 | denotes | nsp12 |
| T443 | 362-367 | PR:000000125 | denotes | nsp12 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T112 | 113-121 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T113 | 136-143 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T114 | 172-176 | Body_part | denotes | ExoN | http://purl.org/sig/ont/fma/fma84120 |
| T115 | 345-348 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T116 | 379-382 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T62 | 104-112 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T285 | 123-124 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T286 | 126-129 | http://purl.obolibrary.org/obo/CLO_0007875 | denotes | MS1 |
| T287 | 126-129 | http://purl.obolibrary.org/obo/CLO_0052410 | denotes | MS1 |
| T288 | 154-155 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T289 | 157-160 | http://purl.obolibrary.org/obo/CLO_0007875 | denotes | MS1 |
| T290 | 157-160 | http://purl.obolibrary.org/obo/CLO_0052410 | denotes | MS1 |
| T291 | 385-387 | http://purl.obolibrary.org/obo/CLO_0007874 | denotes | MS |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T311 | 113-121 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T312 | 136-143 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T313 | 385-387 | Chemical | denotes | MS | http://purl.obolibrary.org/obo/CHEBI_73613 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T257 | 123-384 | Sentence | denotes | A: MS1 and N protein NCB site, B: MS1 and nsp14 [ExoN], C: MX16 and nsp15 [endoribonuclease], D: SX1 and nsp14 [N7-MTase], E: SX1 and nsp15 [endoribonuclease], F: WO1 and nsp16 [2′-O-MTase], G: WO1 and nsp12 [RdRp without RNA], H: XO1 and nsp12 [RdRp with RNA]. |
| T258 | 385-479 | Sentence | denotes | MS: MXSG and SGMH, MX: MXSG and XCH, SX: SGMH and XCH, WO: WLS and Others, XO: XCH and Others. |
LitCovid-PD-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
|---|---|---|---|---|---|
| T6 | 286-289 | GlycoEpitope | denotes | WO1 | http://www.glycoepitope.jp/epitopes/AN0690 |
| T7 | 317-320 | GlycoEpitope | denotes | WO1 | http://www.glycoepitope.jp/epitopes/AN0690 |