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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
2 4-51 Species denotes Severe Acute Respiratory Syndrome Coronavirus-2 Tax:2697049
3 53-63 Species denotes SARS CoV-2 Tax:2697049
21 142-189 Species denotes Severe Acute Respiratory Syndrome Coronavirus 2 Tax:2697049
22 191-201 Species denotes SARS-CoV-2 Tax:2697049
23 208-225 Species denotes novel coronavirus Tax:2697049
24 923-934 Species denotes coronavirus Tax:11118
25 1129-1136 Species denotes patient Tax:9606
26 1259-1266 Species denotes patient Tax:9606
27 289-313 Disease denotes Coronavirus Disease-2019 MESH:C000657245
28 315-323 Disease denotes COVID-19 MESH:C000657245
29 331-340 Disease denotes infection MESH:D007239
30 493-501 Disease denotes infected MESH:D007239
31 552-560 Disease denotes COVID-19 MESH:C000657245
32 596-605 Disease denotes infection MESH:D007239
33 715-724 Disease denotes infection MESH:D007239
34 1051-1060 Disease denotes infection MESH:D007239
35 1112-1121 Disease denotes infection MESH:D007239
36 1187-1202 Disease denotes cross-infection MESH:D003428
37 1478-1487 Disease denotes infection MESH:D007239
47 1548-1567 Species denotes SARS) Coronavirus 2 Tax:2697049
48 1569-1579 Species denotes SARS-CoV-2 Tax:2697049
49 1584-1611 Species denotes a single-stranded RNA virus Tax:674971
50 1652-1665 Species denotes β-Coronavirus Tax:694002
51 1938-1946 Species denotes SARS-CoV Tax:694009
52 1951-1959 Species denotes MERS-CoV Tax:1335626
53 1526-1537 Species denotes Respiratory Tax:12814
54 1756-1780 Disease denotes Coronavirus Disease-2019 MESH:C000657245
55 1782-1790 Disease denotes COVID-19 MESH:C000657245
57 2002-2012 Species denotes SARS-CoV-2 Tax:2697049
59 2279-2285 Disease denotes deaths MESH:D003643
62 2375-2383 Species denotes patients Tax:9606
63 2418-2426 Species denotes patients Tax:9606
67 2567-2577 Species denotes SARS-CoV-2 Tax:2697049
68 2485-2494 Disease denotes infection MESH:D007239
69 2545-2566 Disease denotes coronavirus infection MESH:D018352
74 2741-2746 Species denotes human Tax:9606
75 2773-2778 Species denotes human Tax:9606
76 2782-2787 Species denotes human Tax:9606
77 2690-2698 Disease denotes COVID-19 MESH:C000657245
84 2807-2818 Species denotes coronavirus Tax:11118
85 2969-2975 Species denotes humans Tax:9606
86 2980-2988 Species denotes SARS-CoV Tax:694009
87 2905-2916 Species denotes respiratory Tax:12814
88 3023-3034 Species denotes respiratory Tax:12814
89 2956-2965 Disease denotes infection MESH:D007239
91 3177-3185 Disease denotes coughing MESH:D003371
93 3575-3584 Disease denotes Infection MESH:D007239
98 3886-3894 Species denotes patients Tax:9606
99 3722-3730 Disease denotes infected MESH:D007239
100 3768-3776 Disease denotes infected MESH:D007239
101 3821-3829 Disease denotes COVID-19 MESH:C000657245
106 4214-4224 Species denotes SARS-CoV-2 Tax:2697049
107 4383-4388 Species denotes human Tax:9606
108 4389-4400 Species denotes respiratory Tax:12814
109 4277-4285 Disease denotes infected MESH:D007239
118 4569-4578 Disease denotes dry cough MESH:D003371
119 4580-4587 Disease denotes dyspnea MESH:D004417
120 4589-4597 Disease denotes asthenia MESH:D001247
121 4599-4610 Disease denotes muscle pain MESH:D063806
122 4612-4620 Disease denotes headache MESH:D006261
123 4622-4633 Disease denotes sore throat MESH:D010608
124 4635-4643 Disease denotes diarrhea MESH:D003967
125 4649-4657 Disease denotes vomiting MESH:D014839
127 4807-4816 Disease denotes pneumonia MESH:D011014
130 4886-4906 Disease denotes respiratory symptoms MESH:D012818
131 4917-4926 Disease denotes pneumonia MESH:D011014
144 5070-5078 Species denotes patients Tax:9606
145 5235-5243 Species denotes patients Tax:9606
146 5375-5383 Species denotes patients Tax:9606
147 5021-5030 Disease denotes infection MESH:D007239
148 5032-5039 Disease denotes Dyspnea MESH:D004417
149 5047-5056 Disease denotes hypoxemia MESH:D000860
150 5139-5174 Disease denotes Acute Respiratory Distress Syndrome MESH:D012128
151 5176-5180 Disease denotes ARDS MESH:D012128
152 5183-5195 Disease denotes septic shock MESH:D012772
153 5201-5209 Disease denotes acidosis MESH:D000138
154 5275-5297 Disease denotes coagulation deficiency MESH:D001778
155 5303-5325 Disease denotes multiple organ failure MESH:D009102
169 5569-5583 Species denotes g., adenovirus Tax:346176
170 5596-5617 Species denotes human metapneumovirus Tax:162145
171 5619-5623 Species denotes HmPV Tax:162145
172 5641-5668 Species denotes respiratory syncytial virus Tax:12814
173 5676-5686 Species denotes rhinovirus Tax:12059
174 5585-5594 Species denotes influenza Tax:11309
175 5670-5673 Species denotes RSV Tax:12814
176 5469-5477 Disease denotes COVID-19 MESH:C000657245
177 5695-5699 Disease denotes cold MESH:D000067390
178 5728-5738 Disease denotes vasculitis MESH:D014657
179 5740-5755 Disease denotes dermatomyositis MESH:D003882
180 5781-5790 Disease denotes pneumonia MESH:D011014
181 5799-5820 Disease denotes respiratory disorders MESH:D012131
186 5886-5897 Species denotes respiratory Tax:12814
187 6061-6072 Species denotes respiratory Tax:12814
188 5956-5964 Disease denotes COVID-19 MESH:C000657245
189 6040-6048 Disease denotes COVID-19 MESH:C000657245
191 6207-6216 Disease denotes Infection MESH:D007239
193 6309-6317 Species denotes patients Tax:9606
195 6821-6831 Species denotes SARS-CoV-2 Tax:2697049
200 6939-6946 Species denotes patient Tax:9606
201 7154-7164 Species denotes SARS-CoV-2 Tax:2697049
202 6922-6931 Disease denotes infection MESH:D007239
203 6997-7012 Disease denotes cross-infection MESH:D003428
205 7230-7252 Disease denotes reduction of infection MESH:D007022
207 7638-7658 Disease denotes SARS-CoV-2 infection MESH:C000657245
209 8157-8167 Species denotes SARS-CoV-2 Tax:2697049
218 8178-8188 Species denotes SARS-CoV-2 Tax:2697049
219 8313-8318 Chemical denotes lipid MESH:D008055
220 8336-8341 Chemical denotes ether MESH:D004986
221 8347-8354 Chemical denotes ethanol MESH:D000431
222 8385-8393 Chemical denotes chlorine MESH:D002713
223 8395-8409 Chemical denotes peracetic acid MESH:D010463
224 8415-8425 Chemical denotes chloroform MESH:D002725
225 8450-8463 Chemical denotes chlorhexidine MESH:D002710
227 8565-8576 Species denotes coronavirus Tax:11118
229 8878-8886 Species denotes patients Tax:9606
231 8949-8956 Species denotes patient Tax:9606
233 9148-9155 Species denotes patient Tax:9606
236 9209-9216 Species denotes patient Tax:9606
237 9260-9280 Disease denotes SARS-CoV-2 infection MESH:C000657245
240 9330-9336 Species denotes people Tax:9606
241 9321-9329 Disease denotes infected MESH:D007239
243 9374-9383 Disease denotes infection MESH:D007239
245 8689-8709 Disease denotes SARS-CoV-2 infection MESH:C000657245
248 9483-9490 Species denotes patient Tax:9606
249 9521-9529 Disease denotes infected MESH:D007239
251 9735-9742 Species denotes patient Tax:9606
254 9962-9970 Species denotes patients Tax:9606
255 9976-9987 Species denotes respiratory Tax:12814
257 10326-10334 Species denotes patients Tax:9606
259 10624-10632 Species denotes patients Tax:9606
263 10746-10753 Species denotes patient Tax:9606
264 10897-10903 Species denotes people Tax:9606
265 10941-10948 Species denotes patient Tax:9606
268 11011-11018 Species denotes patient Tax:9606
269 11066-11071 Disease denotes cough MESH:D003371
271 11304-11311 Species denotes patient Tax:9606
274 11594-11601 Species denotes patient Tax:9606
275 11642-11649 Species denotes patient Tax:9606
278 12962-12973 Species denotes respiratory Tax:12814
279 12994-12998 Disease denotes RPDs
285 13139-13147 Disease denotes COVID-19 MESH:C000657245
286 13225-13246 Disease denotes coronavirus infection MESH:D018352
287 13248-13253 Disease denotes cough MESH:D003371
288 13255-13259 Disease denotes cold MESH:D000067390
289 13261-13269 Disease denotes diarrhea MESH:D003967
296 14259-14266 Species denotes patient Tax:9606
297 14489-14496 Species denotes patient Tax:9606
298 14310-14327 Chemical denotes hydrogen peroxide MESH:D006861
299 14352-14369 Chemical denotes hydrogen peroxide MESH:D006861
300 14385-14390 Chemical denotes water MESH:D014867
301 14403-14415 Chemical denotes iodopovidone
304 14615-14623 Disease denotes coughing MESH:D003371
305 14627-14635 Disease denotes vomiting MESH:D014839
307 14879-14886 Species denotes patient Tax:9606
311 15133-15140 Species denotes patient Tax:9606
312 15262-15269 Species denotes patient Tax:9606
313 15013-15017 Disease denotes RPDs
315 15567-15575 Disease denotes infected MESH:D007239
317 15808-15819 Species denotes Respiratory Tax:12814
319 15839-15850 Species denotes Respiratory Tax:12814
323 16846-16853 Species denotes patient Tax:9606
324 16870-16881 Species denotes respiratory Tax:12814
325 16829-16832 Chemical denotes SMs
328 17346-17353 Species denotes patient Tax:9606
329 17305-17314 Disease denotes infection MESH:D007239
332 17457-17464 Species denotes patient Tax:9606
333 17495-17503 Disease denotes infected MESH:D007239
336 17679-17686 Species denotes patient Tax:9606
337 17697-17703 Species denotes people Tax:9606
340 18351-18358 Species denotes patient Tax:9606
341 18318-18326 Disease denotes infected MESH:D007239
343 18913-18920 Disease denotes asepsis
345 19022-19030 Species denotes patients Tax:9606
347 19769-19777 Chemical denotes chlorine MESH:D002713
352 20823-20833 Species denotes SARS-CoV-2 Tax:2697049
353 21117-21127 Species denotes SARS-CoV-2 Tax:2697049
354 20810-20819 Disease denotes infection MESH:D007239
355 21070-21085 Disease denotes cross-infection MESH:D003428
359 21322-21330 Species denotes patients Tax:9606
360 21294-21303 Disease denotes infection MESH:D007239
361 21536-21545 Disease denotes infection MESH:D007239
364 21677-21685 Species denotes patients Tax:9606
365 21756-21764 Species denotes patients Tax:9606
367 21956-21965 Disease denotes infection MESH:D007239
414 22134-22181 Species denotes Severe Acute Respiratory Syndrome Coronavirus 2 Tax:2697049
415 22183-22193 Species denotes SARS-CoV-2 Tax:2697049
417 22301-22311 Species denotes SARS-CoV-2 Tax:2697049
419 22580-22587 Species denotes Patient Tax:9606
421 22775-22782 Species denotes Patient Tax:9606

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 631-636 Body_part denotes mouth http://purl.org/sig/ont/fma/fma49184
T2 638-642 Body_part denotes nose http://purl.org/sig/ont/fma/fma46472
T3 648-652 Body_part denotes eyes http://purl.org/sig/ont/fma/fma54448
T4 796-802 Body_part denotes saliva http://purl.org/sig/ont/fma/fma59862
T5 1602-1605 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T6 1860-1873 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T7 2899-2922 Body_part denotes lower respiratory tract http://purl.org/sig/ont/fma/fma45662
T8 3023-3040 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130
T9 3201-3207 Body_part denotes saliva http://purl.org/sig/ont/fma/fma59862
T10 3606-3611 Body_part denotes mouth http://purl.org/sig/ont/fma/fma49184
T11 3613-3617 Body_part denotes nose http://purl.org/sig/ont/fma/fma46472
T12 3623-3627 Body_part denotes eyes http://purl.org/sig/ont/fma/fma54448
T13 4401-4417 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T14 4412-4417 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T15 4541-4545 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T16 4599-4605 Body_part denotes muscle http://purl.org/sig/ont/fma/fma32558
T17 4627-4633 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T18 4859-4863 Body_part denotes Body http://purl.org/sig/ont/fma/fma256135
T19 5312-5317 Body_part denotes organ http://purl.org/sig/ont/fma/fma67498
T20 5349-5353 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T21 5863-5869 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T22 5886-5904 Body_part denotes respiratory tracts http://purl.org/sig/ont/fma/fma265130
T23 8313-8318 Body_part denotes lipid http://purl.org/sig/ont/fma/fma67264
T24 10008-10021 Body_part denotes immune system http://purl.org/sig/ont/fma/fma9825
T25 10593-10597 Body_part denotes hand http://purl.org/sig/ont/fma/fma9712
T26 11090-11095 Body_part denotes mouth http://purl.org/sig/ont/fma/fma49184
T27 11100-11104 Body_part denotes nose http://purl.org/sig/ont/fma/fma46472
T28 11122-11128 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T29 11134-11140 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T30 12154-12158 Body_part denotes hand http://purl.org/sig/ont/fma/fma9712
T31 12220-12224 Body_part denotes hand http://purl.org/sig/ont/fma/fma9712
T32 12272-12280 Body_part denotes forearms http://purl.org/sig/ont/fma/fma9663
T33 12317-12321 Body_part denotes hand http://purl.org/sig/ont/fma/fma9712
T34 12326-12331 Body_part denotes wrist http://purl.org/sig/ont/fma/fma24922
T35 12348-12359 Body_part denotes fingernails http://purl.org/sig/ont/fma/fma259121
T36 12401-12405 Body_part denotes nail http://purl.org/sig/ont/fma/fma54326
T37 14180-14184 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T38 14267-14272 Body_part denotes mouth http://purl.org/sig/ont/fma/fma49184
T39 14499-14504 Body_part denotes mouth http://purl.org/sig/ont/fma/fma49184
T40 14840-14844 Body_part denotes hand http://purl.org/sig/ont/fma/fma9712
T41 15045-15048 Body_part denotes eye http://purl.org/sig/ont/fma/fma54448
T42 16103-16107 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T43 16755-16759 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T44 16859-16865 Body_part denotes saliva http://purl.org/sig/ont/fma/fma59862
T45 17150-17161 Body_part denotes facial skin http://purl.org/sig/ont/fma/fma24758
T46 17877-17881 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T47 18534-18543 Body_part denotes hand skin http://purl.org/sig/ont/fma/fma38295
T48 18649-18653 Body_part denotes hand http://purl.org/sig/ont/fma/fma9712
T49 18714-18719 Body_part denotes wrist http://purl.org/sig/ont/fma/fma24922
T50 18732-18739 Body_part denotes fingers http://purl.org/sig/ont/fma/fma9666
T51 18762-18766 Body_part denotes skin http://purl.org/sig/ont/fma/fma7163
T52 19087-19091 Body_part denotes Face http://purl.org/sig/ont/fma/fma24728
T53 19096-19099 Body_part denotes Eye http://purl.org/sig/ont/fma/fma54448
T54 19131-19135 Body_part denotes Eyes http://purl.org/sig/ont/fma/fma54448
T55 19179-19183 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T56 19268-19272 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T57 20529-20534 Body_part denotes wrist http://purl.org/sig/ont/fma/fma24922
T58 20557-20561 Body_part denotes skin http://purl.org/sig/ont/fma/fma7163
T59 21486-21490 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T60 21572-21576 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T61 21647-21650 Body_part denotes eye http://purl.org/sig/ont/fma/fma54448
T62 21651-21657 Body_part denotes mucosa http://purl.org/sig/ont/fma/fma85355
T63 22351-22355 Body_part denotes Hand http://purl.org/sig/ont/fma/fma9712
T64 22418-22422 Body_part denotes Hand http://purl.org/sig/ont/fma/fma9712
T65 22558-22562 Body_part denotes Hand http://purl.org/sig/ont/fma/fma9712
T66 22596-22600 Body_part denotes Hand http://purl.org/sig/ont/fma/fma9712
T67 22754-22758 Body_part denotes Hand http://purl.org/sig/ont/fma/fma9712
T68 22791-22795 Body_part denotes Hand http://purl.org/sig/ont/fma/fma9712

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 631-636 Body_part denotes mouth http://purl.obolibrary.org/obo/UBERON_0000165
T2 638-642 Body_part denotes nose http://purl.obolibrary.org/obo/UBERON_0000004
T3 796-802 Body_part denotes saliva http://purl.obolibrary.org/obo/UBERON_0001836
T4 2899-2922 Body_part denotes lower respiratory tract http://purl.obolibrary.org/obo/UBERON_0001558
T5 2905-2922 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T6 3023-3040 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T7 3201-3207 Body_part denotes saliva http://purl.obolibrary.org/obo/UBERON_0001836
T8 3606-3611 Body_part denotes mouth http://purl.obolibrary.org/obo/UBERON_0000165
T9 3613-3617 Body_part denotes nose http://purl.obolibrary.org/obo/UBERON_0000004
T10 4125-4130 Body_part denotes hands http://purl.obolibrary.org/obo/UBERON_0002398
T11 4627-4633 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T12 5312-5317 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T13 5863-5869 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T14 5886-5904 Body_part denotes respiratory tracts http://purl.obolibrary.org/obo/UBERON_0000065
T15 10008-10021 Body_part denotes immune system http://purl.obolibrary.org/obo/UBERON_0002405
T16 10593-10597 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T17 11090-11095 Body_part denotes mouth http://purl.obolibrary.org/obo/UBERON_0000165
T18 11100-11104 Body_part denotes nose http://purl.obolibrary.org/obo/UBERON_0000004
T19 11122-11128 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T20 11134-11140 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T21 11259-11264 Body_part denotes hands http://purl.obolibrary.org/obo/UBERON_0002398
T22 12154-12158 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T23 12220-12224 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T24 12317-12321 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T25 12401-12405 Body_part denotes nail http://purl.obolibrary.org/obo/UBERON_0001705
T26 14267-14272 Body_part denotes mouth http://purl.obolibrary.org/obo/UBERON_0000165
T27 14499-14504 Body_part denotes mouth http://purl.obolibrary.org/obo/UBERON_0000165
T28 14840-14844 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T29 15045-15048 Body_part denotes eye http://purl.obolibrary.org/obo/UBERON_0000970
T30 16103-16107 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T31 16755-16759 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T32 16859-16865 Body_part denotes saliva http://purl.obolibrary.org/obo/UBERON_0001836
T33 16992-16997 Body_part denotes valve http://purl.obolibrary.org/obo/UBERON_0003978
T34 17028-17033 Body_part denotes valve http://purl.obolibrary.org/obo/UBERON_0003978
T35 17157-17161 Body_part denotes skin http://purl.obolibrary.org/obo/UBERON_0000014
T36 17293-17298 Body_part denotes valve http://purl.obolibrary.org/obo/UBERON_0003978
T37 17877-17881 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T38 18534-18538 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T39 18539-18543 Body_part denotes skin http://purl.obolibrary.org/obo/UBERON_0000014
T40 18649-18653 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T41 18732-18739 Body_part denotes fingers http://purl.obolibrary.org/obo/UBERON_0002389
T42 18762-18766 Body_part denotes skin http://purl.obolibrary.org/obo/UBERON_0000014
T43 19044-19049 Body_part denotes hands http://purl.obolibrary.org/obo/UBERON_0002398
T44 19087-19091 Body_part denotes Face http://purl.obolibrary.org/obo/UBERON_0001456
T45 19179-19183 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T46 19268-19272 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T47 20557-20561 Body_part denotes skin http://purl.obolibrary.org/obo/UBERON_0000014
T48 20568-20573 Body_part denotes hands http://purl.obolibrary.org/obo/UBERON_0002398
T49 20775-20780 Body_part denotes hands http://purl.obolibrary.org/obo/UBERON_0002398
T50 21486-21490 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T51 21572-21576 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T52 21647-21650 Body_part denotes eye http://purl.obolibrary.org/obo/UBERON_0000970
T53 21651-21657 Body_part denotes mucosa http://purl.obolibrary.org/obo/UBERON_0000344
T54 22351-22355 Body_part denotes Hand http://purl.obolibrary.org/obo/UBERON_0002398
T55 22418-22422 Body_part denotes Hand http://purl.obolibrary.org/obo/UBERON_0002398
T56 22558-22562 Body_part denotes Hand http://purl.obolibrary.org/obo/UBERON_0002398
T57 22596-22600 Body_part denotes Hand http://purl.obolibrary.org/obo/UBERON_0002398
T58 22754-22758 Body_part denotes Hand http://purl.obolibrary.org/obo/UBERON_0002398
T59 22791-22795 Body_part denotes Hand http://purl.obolibrary.org/obo/UBERON_0002398

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 4-51 Disease denotes Severe Acute Respiratory Syndrome Coronavirus-2 http://purl.obolibrary.org/obo/MONDO_0100096
T2 53-57 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T3 142-189 Disease denotes Severe Acute Respiratory Syndrome Coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T4 191-199 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T5 289-313 Disease denotes Coronavirus Disease-2019 http://purl.obolibrary.org/obo/MONDO_0100096
T6 315-323 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T7 331-340 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T8 552-560 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T9 596-605 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T10 715-724 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T11 1051-1060 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T12 1112-1121 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T13 1193-1202 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T14 1478-1487 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T15 1548-1552 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T16 1569-1577 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T17 1756-1780 Disease denotes Coronavirus Disease-2019 http://purl.obolibrary.org/obo/MONDO_0100096
T18 1782-1790 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T19 1938-1946 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T20 2002-2010 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T21 2485-2494 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T22 2557-2566 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T23 2567-2575 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T24 2690-2698 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T25 2956-2965 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T26 2980-2988 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T27 3575-3584 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T28 3821-3829 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T29 3969-3978 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T30 4214-4222 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T31 4622-4633 Disease denotes sore throat http://purl.obolibrary.org/obo/MONDO_0002258
T32 4635-4643 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T33 4807-4816 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T34 4917-4926 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T35 5021-5030 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T36 5139-5174 Disease denotes Acute Respiratory Distress Syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T37 5145-5174 Disease denotes Respiratory Distress Syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T38 5176-5180 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T39 5201-5209 Disease denotes acidosis http://purl.obolibrary.org/obo/MONDO_0006022
T40 5303-5325 Disease denotes multiple organ failure http://purl.obolibrary.org/obo/MONDO_0043726
T41 5469-5477 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T42 5555-5565 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T43 5585-5594 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T44 5688-5699 Disease denotes common cold http://purl.obolibrary.org/obo/MONDO_0005709
T45 5710-5720 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T46 5728-5738 Disease denotes vasculitis http://purl.obolibrary.org/obo/MONDO_0018882
T47 5740-5755 Disease denotes dermatomyositis http://purl.obolibrary.org/obo/MONDO_0016367
T48 5781-5790 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T49 5799-5820 Disease denotes respiratory disorders http://purl.obolibrary.org/obo/MONDO_0005087
T50 5956-5964 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T51 6040-6048 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T52 6097-6107 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T53 6207-6216 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T54 6555-6565 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T55 6821-6829 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T56 6922-6931 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T57 7003-7012 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T58 7154-7162 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T59 7243-7252 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T60 7638-7646 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T61 7649-7658 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T62 8157-8165 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T63 8178-8186 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T64 8689-8697 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T65 8700-8709 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T66 9260-9268 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T67 9271-9280 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T68 9374-9383 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T69 10008-10030 Disease denotes immune system diseases http://purl.obolibrary.org/obo/MONDO_0005046
T70 11800-11810 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T71 13139-13147 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T72 13237-13246 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T73 13261-13269 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T74 13271-13274 Disease denotes flu http://purl.obolibrary.org/obo/MONDO_0005812
T75 17305-17314 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T76 18852-18859 Disease denotes sterile http://purl.obolibrary.org/obo/MONDO_0005047
T77 20810-20819 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T78 20823-20831 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T79 21076-21085 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T80 21117-21125 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T81 21294-21303 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T82 21536-21545 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T83 21956-21965 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T84 22134-22181 Disease denotes Severe Acute Respiratory Syndrome Coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T85 22183-22191 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T86 22301-22309 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 206-207 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T2 470-473 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T3 579-584 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T4 631-636 http://www.ebi.ac.uk/efo/EFO_0000825 denotes mouth
T5 638-642 http://www.ebi.ac.uk/efo/EFO_0000828 denotes nose
T6 648-652 http://www.ebi.ac.uk/efo/EFO_0000827 denotes eyes
T7 821-833 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T8 840-843 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T9 961-966 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T10 991-992 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 1127-1128 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 1324-1331 http://purl.obolibrary.org/obo/OBI_0000968 denotes devices
T13 1584-1585 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 1606-1611 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T15 1797-1802 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T16 1803-1806 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T17 1807-1808 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T18 2089-2090 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T19 2157-2169 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T20 2213-2215 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T21 2295-2300 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T22 2431-2437 http://purl.obolibrary.org/obo/UBERON_0003100 denotes female
T23 2596-2597 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T24 2731-2737 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T25 2741-2746 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T26 2770-2778 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes by human
T27 2782-2787 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T28 2899-2922 http://purl.obolibrary.org/obo/UBERON_0001558 denotes lower respiratory tract
T29 2969-2975 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T30 3050-3055 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T31 3475-3476 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T32 3517-3520 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T33 3521-3522 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T34 3606-3611 http://www.ebi.ac.uk/efo/EFO_0000825 denotes mouth
T35 3613-3617 http://www.ebi.ac.uk/efo/EFO_0000828 denotes nose
T36 3623-3627 http://www.ebi.ac.uk/efo/EFO_0000827 denotes eyes
T37 3648-3653 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T38 3956-3961 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T39 3992-3993 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T40 4341-4344 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T41 4359-4364 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T42 4383-4388 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T43 4401-4411 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T44 4412-4417 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T45 4468-4470 http://purl.obolibrary.org/obo/CLO_0001382 denotes 48
T46 4599-4605 http://purl.obolibrary.org/obo/UBERON_0001630 denotes muscle
T47 4599-4605 http://purl.obolibrary.org/obo/UBERON_0005090 denotes muscle
T48 4599-4605 http://www.ebi.ac.uk/efo/EFO_0000801 denotes muscle
T49 4599-4605 http://www.ebi.ac.uk/efo/EFO_0001949 denotes muscle
T50 5312-5317 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T51 5539-5540 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T52 5596-5601 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T53 5663-5668 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T54 5757-5766 http://purl.obolibrary.org/obo/OBI_0000245 denotes organized
T55 5870-5876 http://purl.obolibrary.org/obo/UBERON_0002553 denotes cavity
T56 6396-6406 http://purl.obolibrary.org/obo/CLO_0001658 denotes activities
T57 6937-6938 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T58 7182-7183 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T59 7447-7451 http://purl.obolibrary.org/obo/CLO_0008479 denotes PPEs
T60 7460-7461 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T61 7606-7617 http://purl.obolibrary.org/obo/OBI_0000968 denotes instruments
T62 7830-7835 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T63 7927-7932 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T64 7971-7972 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T65 7986-7987 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T66 8189-8194 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T67 8264-8265 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T68 8474-8477 http://purl.obolibrary.org/obo/PR_000001343 denotes aim
T69 8500-8505 http://purl.obolibrary.org/obo/CLO_0009985 denotes focus
T70 8563-8564 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T71 8962-8963 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T72 9112-9113 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T73 9244-9247 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T74 9282-9285 http://purl.obolibrary.org/obo/CLO_0051582 denotes Has
T75 9338-9341 http://purl.obolibrary.org/obo/CLO_0051582 denotes Has
T76 9412-9413 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T77 10008-10021 http://purl.obolibrary.org/obo/UBERON_0002405 denotes immune system
T78 10240-10241 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T79 10339-10340 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T80 10400-10407 http://purl.obolibrary.org/obo/OBI_0000968 denotes devices
T81 10534-10541 http://purl.obolibrary.org/obo/BFO_0000030 denotes objects
T82 11090-11095 http://www.ebi.ac.uk/efo/EFO_0000825 denotes mouth
T83 11100-11104 http://www.ebi.ac.uk/efo/EFO_0000828 denotes nose
T84 11120-11121 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T85 11176-11177 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T86 11624-11627 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T87 11663-11666 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T88 12118-12119 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T89 12469-12470 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T90 12525-12532 http://purl.obolibrary.org/obo/BFO_0000030 denotes objects
T91 12826-12827 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T92 12859-12860 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T93 12985-12992 http://purl.obolibrary.org/obo/OBI_0000968 denotes devices
T94 13058-13062 http://purl.obolibrary.org/obo/CLO_0008479 denotes PPEs
T95 13223-13224 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T96 13601-13604 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T97 13834-13845 http://purl.obolibrary.org/obo/OBI_0000968 denotes instruments
T98 14123-14124 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T99 14180-14190 http://purl.obolibrary.org/obo/UBERON_0000475 denotes body parts
T100 14180-14190 http://www.ebi.ac.uk/efo/EFO_0000808 denotes body parts
T101 14197-14198 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T102 14267-14272 http://www.ebi.ac.uk/efo/EFO_0000825 denotes mouth
T103 14293-14294 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T104 14462-14467 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T105 14499-14504 http://www.ebi.ac.uk/efo/EFO_0000825 denotes mouth
T106 14958-14964 http://www.ebi.ac.uk/efo/EFO_0000825 denotes valves
T107 15045-15048 http://www.ebi.ac.uk/efo/EFO_0000827 denotes eye
T108 15293-15297 http://purl.obolibrary.org/obo/CLO_0008479 denotes PPEs
T109 15327-15328 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T110 15442-15443 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T111 15716-15723 http://purl.obolibrary.org/obo/OBI_0000968 denotes devices
T112 15831-15838 http://purl.obolibrary.org/obo/OBI_0000968 denotes Devices
T113 15862-15869 http://purl.obolibrary.org/obo/OBI_0000968 denotes devices
T114 15967-15974 http://purl.obolibrary.org/obo/OBI_0000968 denotes devices
T115 16103-16107 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T116 16171-16174 http://purl.obolibrary.org/obo/CLO_0008346 denotes P95
T117 16187-16190 http://purl.obolibrary.org/obo/CLO_0008724 denotes R95
T118 16236-16238 http://purl.obolibrary.org/obo/CLO_0037161 denotes EN
T119 16363-16365 http://purl.obolibrary.org/obo/CLO_0001527 denotes 94
T120 16398-16399 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T121 16449-16450 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T122 16755-16759 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T123 16992-16997 http://www.ebi.ac.uk/efo/EFO_0000825 denotes valve
T124 17026-17027 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T125 17028-17033 http://www.ebi.ac.uk/efo/EFO_0000825 denotes valve
T126 17130-17131 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T127 17157-17161 http://purl.obolibrary.org/obo/UBERON_0000014 denotes skin
T128 17157-17161 http://purl.obolibrary.org/obo/UBERON_0001003 denotes skin
T129 17157-17161 http://purl.obolibrary.org/obo/UBERON_0002097 denotes skin
T130 17157-17161 http://purl.obolibrary.org/obo/UBERON_0002199 denotes skin
T131 17157-17161 http://www.ebi.ac.uk/efo/EFO_0000962 denotes skin
T132 17293-17298 http://www.ebi.ac.uk/efo/EFO_0000825 denotes valve
T133 17373-17379 http://www.ebi.ac.uk/efo/EFO_0000825 denotes valves
T134 17513-17518 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T135 17607-17608 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T136 17794-17795 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T137 17854-17855 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T138 17875-17876 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T139 17877-17881 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T140 18134-18135 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T141 18410-18411 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T142 18539-18543 http://purl.obolibrary.org/obo/UBERON_0000014 denotes skin
T143 18539-18543 http://purl.obolibrary.org/obo/UBERON_0001003 denotes skin
T144 18539-18543 http://purl.obolibrary.org/obo/UBERON_0002097 denotes skin
T145 18539-18543 http://purl.obolibrary.org/obo/UBERON_0002199 denotes skin
T146 18539-18543 http://www.ebi.ac.uk/efo/EFO_0000962 denotes skin
T147 18762-18766 http://purl.obolibrary.org/obo/UBERON_0000014 denotes skin
T148 18762-18766 http://purl.obolibrary.org/obo/UBERON_0001003 denotes skin
T149 18762-18766 http://purl.obolibrary.org/obo/UBERON_0002097 denotes skin
T150 18762-18766 http://purl.obolibrary.org/obo/UBERON_0002199 denotes skin
T151 18762-18766 http://www.ebi.ac.uk/efo/EFO_0000962 denotes skin
T152 19087-19091 http://purl.obolibrary.org/obo/UBERON_0001456 denotes Face
T153 19096-19099 http://www.ebi.ac.uk/efo/EFO_0000827 denotes Eye
T154 19131-19135 http://www.ebi.ac.uk/efo/EFO_0000827 denotes Eyes
T155 19172-19173 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T156 19179-19183 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T157 19268-19272 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T158 19667-19668 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T159 19767-19768 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T160 19808-19810 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T161 19818-19819 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T162 20398-20399 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T163 20557-20561 http://purl.obolibrary.org/obo/UBERON_0000014 denotes skin
T164 20557-20561 http://purl.obolibrary.org/obo/UBERON_0001003 denotes skin
T165 20557-20561 http://purl.obolibrary.org/obo/UBERON_0002097 denotes skin
T166 20557-20561 http://purl.obolibrary.org/obo/UBERON_0002199 denotes skin
T167 20557-20561 http://www.ebi.ac.uk/efo/EFO_0000962 denotes skin
T168 20580-20581 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T169 20845-20846 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T170 20938-20939 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T171 20984-20989 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T172 21052-21053 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T173 21219-21224 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T174 21486-21490 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T175 21572-21576 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T176 21647-21650 http://www.ebi.ac.uk/efo/EFO_0000827 denotes eye
T177 21651-21657 http://purl.obolibrary.org/obo/UBERON_0000344 denotes mucosa
T178 21701-21702 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T179 22487-22489 http://purl.obolibrary.org/obo/CLO_0037161 denotes en
T180 22703-22705 http://purl.obolibrary.org/obo/CLO_0037161 denotes en
T181 22898-22900 http://purl.obolibrary.org/obo/CLO_0037161 denotes en

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 1809-1814 Chemical denotes crown http://purl.obolibrary.org/obo/CHEBI_37409
T2 1860-1873 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T3 2828-2839 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T4 3441-3447 Chemical denotes nuclei http://purl.obolibrary.org/obo/CHEBI_33252
T5 3680-3683 Chemical denotes oro http://purl.obolibrary.org/obo/CHEBI_29287
T6 3930-3938 Chemical denotes carriers http://purl.obolibrary.org/obo/CHEBI_78059
T7 5828-5835 Chemical denotes antigen http://purl.obolibrary.org/obo/CHEBI_59132
T8 8313-8318 Chemical denotes lipid http://purl.obolibrary.org/obo/CHEBI_18059
T9 8319-8327 Chemical denotes solvents http://purl.obolibrary.org/obo/CHEBI_46787
T10 8336-8341 Chemical denotes ether http://purl.obolibrary.org/obo/CHEBI_25698
T11 8347-8354 Chemical denotes ethanol http://purl.obolibrary.org/obo/CHEBI_16236
T12 8360-8373 Chemical denotes disinfectants http://purl.obolibrary.org/obo/CHEBI_48219
T13 8385-8393 Chemical denotes chlorine http://purl.obolibrary.org/obo/CHEBI_23116|http://purl.obolibrary.org/obo/CHEBI_29310
T15 8405-8409 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T16 8415-8425 Chemical denotes chloroform http://purl.obolibrary.org/obo/CHEBI_35255
T17 8450-8463 Chemical denotes chlorhexidine http://purl.obolibrary.org/obo/CHEBI_3614
T18 11727-11733 Chemical denotes Manage http://purl.obolibrary.org/obo/CHEBI_81767
T19 14075-14088 Chemical denotes disinfectants http://purl.obolibrary.org/obo/CHEBI_48219
T20 14298-14306 Chemical denotes solution http://purl.obolibrary.org/obo/CHEBI_75958
T21 14310-14327 Chemical denotes hydrogen peroxide http://purl.obolibrary.org/obo/CHEBI_16240
T22 14310-14318 Chemical denotes hydrogen http://purl.obolibrary.org/obo/CHEBI_49637
T23 14319-14327 Chemical denotes peroxide http://purl.obolibrary.org/obo/CHEBI_44785
T24 14352-14369 Chemical denotes hydrogen peroxide http://purl.obolibrary.org/obo/CHEBI_16240
T25 14352-14360 Chemical denotes hydrogen http://purl.obolibrary.org/obo/CHEBI_49637
T26 14361-14369 Chemical denotes peroxide http://purl.obolibrary.org/obo/CHEBI_44785
T27 14385-14390 Chemical denotes water http://purl.obolibrary.org/obo/CHEBI_15377
T28 19769-19777 Chemical denotes chlorine http://purl.obolibrary.org/obo/CHEBI_23116|http://purl.obolibrary.org/obo/CHEBI_29310
T30 19778-19786 Chemical denotes solution http://purl.obolibrary.org/obo/CHEBI_75958
T31 22487-22489 Chemical denotes en http://purl.obolibrary.org/obo/CHEBI_30347
T32 22703-22705 Chemical denotes en http://purl.obolibrary.org/obo/CHEBI_30347
T33 22898-22900 Chemical denotes en http://purl.obolibrary.org/obo/CHEBI_30347

2_test

Id Subject Object Predicate Lexical cue
32354081-32127517-49422991 1961-1962 32127517 denotes 1
32354081-32169119-49422992 1963-1964 32169119 denotes 2
32354081-32169119-49422993 2107-2108 32169119 denotes 2
32354081-32169119-49422994 2439-2440 32169119 denotes 2
32354081-32169119-49422995 2799-2800 32169119 denotes 2
32354081-32169119-49422996 3042-3043 32169119 denotes 2
32354081-32127517-49422997 3141-3142 32127517 denotes 1
32354081-32127517-49422998 3368-3369 32127517 denotes 1
32354081-26597631-49422999 3571-3572 26597631 denotes 4
32354081-32127517-49423000 3697-3698 32127517 denotes 1
32354081-26597631-49423001 3699-3700 26597631 denotes 4
32354081-31986261-49423002 3963-3964 31986261 denotes 5
32354081-32003551-49423003 3965-3966 32003551 denotes 6
32354081-26597631-49423004 4210-4211 26597631 denotes 4
32354081-32046819-49423005 4503-4504 32046819 denotes 7
32354081-32162995-49423006 4505-4506 32162995 denotes 8
32354081-32007143-49423007 4659-4660 32007143 denotes 9
32354081-32169119-49423008 6120-6121 32169119 denotes 2
32354081-32235685-49423009 7619-7621 32235685 denotes 12
32354081-26597631-49423010 7861-7862 26597631 denotes 4
32354081-32292630-49423011 8067-8069 32292630 denotes 13
32354081-32292630-49423012 8169-8171 32292630 denotes 13
32354081-32292630-49423013 8465-8467 32292630 denotes 13
32354081-26597631-49423014 10269-10270 26597631 denotes 4
32354081-32007143-49423015 13438-13439 32007143 denotes 9
32354081-20544352-49423016 14637-14639 20544352 denotes 15
32354081-32162995-49423017 15005-15006 32162995 denotes 8
32354081-2681303-49423018 15379-15381 2681303 denotes 17
32354081-27195721-49423019 16460-16462 27195721 denotes 20
32354081-32003551-49423020 21235-21236 32003551 denotes 6
T66034 1961-1962 32127517 denotes 1
T20810 1963-1964 32169119 denotes 2
T31122 2107-2108 32169119 denotes 2
T25170 2439-2440 32169119 denotes 2
T91090 2799-2800 32169119 denotes 2
T88738 3042-3043 32169119 denotes 2
T98045 3141-3142 32127517 denotes 1
T45274 3368-3369 32127517 denotes 1
T72054 3571-3572 26597631 denotes 4
T54868 3697-3698 32127517 denotes 1
T86694 3699-3700 26597631 denotes 4
T46444 3963-3964 31986261 denotes 5
T84051 3965-3966 32003551 denotes 6
T86527 4210-4211 26597631 denotes 4
T94947 4503-4504 32046819 denotes 7
T56290 4505-4506 32162995 denotes 8
T12824 4659-4660 32007143 denotes 9
T91103 6120-6121 32169119 denotes 2
T3535 7619-7621 32235685 denotes 12
T77325 7861-7862 26597631 denotes 4
T2515 8067-8069 32292630 denotes 13
T2314 8169-8171 32292630 denotes 13
T6128 8465-8467 32292630 denotes 13
T47753 10269-10270 26597631 denotes 4
T14351 13438-13439 32007143 denotes 9
T81966 14637-14639 20544352 denotes 15
T77357 15005-15006 32162995 denotes 8
T65902 15379-15381 2681303 denotes 17
T30471 16460-16462 27195721 denotes 20
T37574 21235-21236 32003551 denotes 6

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 2475-2481 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T2 5275-5286 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation
T3 16882-16891 http://purl.obolibrary.org/obo/GO_0046903 denotes secretion

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-78 Sentence denotes The Severe Acute Respiratory Syndrome Coronavirus-2 (SARS CoV-2) in Dentistry.
T2 79-127 Sentence denotes Management of Biological Risk in Dental Practice
T3 129-137 Sentence denotes Abstract
T4 138-325 Sentence denotes The Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) is a novel coronavirus first identified in Wuhan, China, and the etiological agent of Coronavirus Disease-2019 (COVID-19).
T5 326-456 Sentence denotes This infection spreads mainly through direct contact with Flügge micro droplets or core droplets that remain suspended as aerosol.
T6 457-585 Sentence denotes Moreover, it has been reported that infected subjects, both with and without clinical signs of COVID-19, can transmit the virus.
T7 586-803 Sentence denotes Since the infection typically enters through mouth, nose, and eyes, dentistry is one of the medical practices at highest risk of infection due to the frequent production of aerosol and the constant presence of saliva.
T8 804-944 Sentence denotes The World Health Organization (WHO) has suggested that only emergency/urgent procedures should be performed during the coronavirus outbreak.
T9 945-1204 Sentence denotes Considering the virus’ route of transmission, a specific protocol should be applied to reduce the risk of infection in addition to measures that prevent the spread of infection from a patient to another person or medical tools and equipment (cross-infection).
T10 1205-1361 Sentence denotes This protocol should be implemented by modifying both patient management and clinical practice, introducing particular devices and organizational practices.
T11 1362-1493 Sentence denotes This paper aims to discuss and suggest the most appropriate procedures in every aspect of dental practice to reduce infection risk.
T12 1495-1497 Sentence denotes 1.
T13 1498-1510 Sentence denotes Introduction
T14 1511-1792 Sentence denotes The Severe Air Respiratory Syndrome (SARS) Coronavirus 2 (SARS-CoV-2) is a single-stranded RNA virus (+ssRNA) of 60–140 nm, belonging to the β-Coronavirus genus (subgenus sarbecovirus, Orthocoronavirinae subfamily), and the etiological agent of Coronavirus Disease-2019 (COVID-19).
T15 1793-1966 Sentence denotes The virus has a crown-like appearance due to the presence of spike glycoproteins on the envelope, and is considerably different genetically from SARS-CoV and MERS-CoV [1,2].
T16 1968-1972 Sentence denotes 1.1.
T17 1973-1985 Sentence denotes Epidemiology
T18 1986-2110 Sentence denotes The outbreak of SARS-CoV-2 was first reported on 12 December 2019 in Wuhan, China, possibly related to a seafood market [2].
T19 2111-2356 Sentence denotes Based on data retrieved from the World Health Organization (WHO), at the date of the present article (22 April 2020), there are 2,471,136 confirmed cases, with 169,006 deaths, and the virus is present in 213 countries, areas, or territories [3].
T20 2357-2442 Sentence denotes The median age of patients is 47–59 years and 41.9%–45.7% of patients are female [2].
T21 2443-2611 Sentence denotes Due to the widespread and rapid growth of infection, WHO declared that the global outbreak of the new coronavirus infection SARS-CoV-2 can be considered a pandemic [3].
T22 2613-2617 Sentence denotes 1.2.
T23 2618-2639 Sentence denotes Route of Transmission
T24 2640-2802 Sentence denotes Genetic and epidemiologic research shows that the COVID-19 outbreak likely started through animal-to-human transmission, followed by human-to-human diffusion [2].
T25 2803-2923 Sentence denotes The coronavirus exploits angiotensin-converting enzyme 2 receptor (ACE2), which is found in the lower respiratory tract.
T26 2924-3045 Sentence denotes This is similar to the route of infection in humans for SARS-CoV, which mainly spreads through the respiratory tract [2].
T27 3046-3144 Sentence denotes The virus is transmitted through Flügge micro droplets (droplets) and core droplets (aerosol) [1].
T28 3145-3208 Sentence denotes Diffusion mainly occurs through coughing, sneezing, and saliva.
T29 3209-3371 Sentence denotes The distance and length of time that particles remain suspended in the air is determined by particle size, settling velocity, relative humidity, and air flow [1].
T30 3372-3436 Sentence denotes Flügge droplets that are >5 µm in diameter can spread up to 1 m.
T31 3437-3574 Sentence denotes The nuclei of the droplets which have a diameter <5 µm, create an aerosol which has a diffusion capacity greater than 1 m (Figure 1) [4].
T32 3575-3628 Sentence denotes Infection entry points are the mouth, nose, and eyes.
T33 3629-3702 Sentence denotes In rare cases, the virus can be transmitted by the oro-fecal route [1,4].
T34 3703-3830 Sentence denotes The propagation of infected droplets occurs through contact with infected subjects, with or without clinical signs of COVID-19.
T35 3831-3968 Sentence denotes Many observations have reported that even asymptomatic patients in the incubation phase or healthy carriers can transmit the virus [5,6].
T36 3969-4213 Sentence denotes Infection can occur as a result of close direct interpersonal proximity (distance less than 2 m and duration greater than 15 min. or following contact with hands which have come into contact with contaminated surfaces or airborne particles [4].
T37 4214-4333 Sentence denotes SARS-CoV-2 could present an asymptomatic incubation period for infected individuals that varies from 5 or 6 to 14 days.
T38 4334-4508 Sentence denotes Backer has reported that virus identification in human respiratory epithelial cells could be positive about 96 h from exposure and 24−48 h before the onset of symptoms [7,8].
T39 4509-4662 Sentence denotes The most frequent symptoms are: body temperatures >37.4 °C, dry cough, dyspnea, asthenia, muscle pain, headache, sore throat, diarrhea, and vomiting [9].
T40 4664-4668 Sentence denotes 1.3.
T41 4669-4692 Sentence denotes Clinical Classification
T42 4693-4768 Sentence denotes In relation to the symptoms, the disease can be classified as follows [10].
T43 4769-4779 Sentence denotes Mild form:
T44 4780-4843 Sentence denotes Mild symptoms, no signs of pneumonia are observed at radiology.
T45 4844-4858 Sentence denotes Moderate form:
T46 4859-4955 Sentence denotes Body temperature >37.4 °C, respiratory symptoms, signs of pneumonia are observed with radiology.
T47 4956-4984 Sentence denotes Severe and very severe form:
T48 4985-5031 Sentence denotes Usually occurs seven days after the infection.
T49 5032-5210 Sentence denotes Dyspnea and/or hypoxemia may occur in patients with severe forms of the disease, with rapid progression to Acute Respiratory Distress Syndrome (ARDS), septic shock, and acidosis.
T50 5211-5336 Sentence denotes In critical/very severe patients, severe metabolic alterations, coagulation deficiency, and multiple organ failure can occur.
T51 5337-5406 Sentence denotes The rise in body temperature in these patients may be mild or absent.
T52 5408-5412 Sentence denotes 1.4.
T53 5413-5435 Sentence denotes Differential Diagnosis
T54 5436-5494 Sentence denotes The symptoms of the mild form of COVID-19 are nonspecific.
T55 5495-5821 Sentence denotes Differential diagnosis should be made using a wide range of infectious (e.g., adenovirus, influenza, human metapneumovirus (HmPV), parainfluenza, respiratory syncytial virus (RSV), rhinovirus (common cold)) and non-infectious (e.g., vasculitis, dermatomyositis, organized cryptogenetic pneumonia) common respiratory disorders.
T56 5822-5965 Sentence denotes Rapid antigen detection in the nasal and throat cavity or other respiratory tracts is currently the best clinical diagnosis method of COVID-19.
T57 5966-6126 Sentence denotes This method and other investigations should be performed to differentiate COVID-19 from common respiratory pathogens and other non-infectious conditions [2,11].
T58 6127-6202 Sentence denotes Scientific knowledge on its clinical evolution is constantly being updated.
T59 6204-6206 Sentence denotes 2.
T60 6207-6240 Sentence denotes Infection Risk in Dental Practice
T61 6241-6387 Sentence denotes Biological risk is an intrinsic threat in dental practice, to which patients, doctors, assistants, hygienists, and all other staff may be exposed.
T62 6388-6583 Sentence denotes Medical activities carried out in dental practice must always refer to procedures for the assessment and prevention of risks posed by the potential transmission of an infectious biological agent.
T63 6584-6727 Sentence denotes However, the procedures adopted routinely to date have not been specifically designed for the prevention of pathogens transmissible by aerosol.
T64 6728-6836 Sentence denotes Therefore, there are currently no specific guidelines for the protection of dentists against SARS-CoV-2 [3].
T65 6837-7178 Sentence denotes Due to the transmission route, in addition to measures that prevent diffusion of the infection from a patient to another person or medical tools and equipment (cross-infection), it is advisable to add further airborne and contact precautions to the routine standard hygienic procedures in order to reduce the risk of SARS-CoV-2 transmission.
T66 7179-7459 Sentence denotes In a dental practice, the prevention, control, and reduction of infection transmission risk commonly takes place through:The use of personal protective equipment (PPE) such as gloves, masks, visors, goggles, dental uniform, and surgical gown and shoes (see section on PPEs below).
T67 7460-7623 Sentence denotes A set of decontamination, disinfection, and sterilization procedures aimed at inactivating, destroying, or removing pathogens from any surface or instruments [12].
T68 7624-7738 Sentence denotes Prevention of SARS-CoV-2 infection must consider its spread through air and the size of droplets (<5 µm or >5 µm).
T69 7739-7864 Sentence denotes The disease prevention measures should also take into account the potential ability of the virus to contaminate surfaces [4].
T70 7865-8071 Sentence denotes Although certain data are not available, the WHO reports that virus persistence on surfaces can vary from a few hours to a few days in relation to environmental parameters and the contaminated surface [13].
T71 8072-8173 Sentence denotes An environment with low relative humidity is reported to decrease the persistence of SARS-CoV-2 [13].
T72 8174-8426 Sentence denotes The SARS-CoV-2 virus is sensitive to ultraviolet rays and heat, and can be inactivated at a temperature of 56 °C for 30 min, as well as by lipid solvents such as ether, 75% ethanol, and disinfectants containing chlorine, peracetic acid, and chloroform.
T73 8427-8469 Sentence denotes It is not sensitive to chlorhexidine [13].
T74 8470-8586 Sentence denotes The aim of this article is to focus on hygienic procedures within the dental practice during a coronavirus pandemic.
T75 8588-8590 Sentence denotes 3.
T76 8591-8643 Sentence denotes Hygiene Measures among Dental Practice Professionals
T77 8645-8649 Sentence denotes 3.1.
T78 8650-8666 Sentence denotes Generic Measures
T79 8667-8937 Sentence denotes To reduce the risk of SARS-CoV-2 infection, given how the disease spreads and the current health crisis, the following prevention measures are suggested in addition to what is already generally performed:Inform patients of the procedures for accessing the dental office.
T80 8938-9101 Sentence denotes Inform the patient that a telephone triage will be administered and any suspicious case will be reported to competent health authorities for further investigation.
T81 9102-9204 Sentence denotes Carry out a preliminary telephone triage upon patient access to the office in order to assess whether:
T82 9205-9281 Sentence denotes The patient who is entering the office has symptoms of SARS-CoV-2 infection;
T83 9282-9337 Sentence denotes Has come into contact with potentially infected people;
T84 9338-9395 Sentence denotes Has been in areas with high risk of infection (Figure 2).
T85 9396-9462 Sentence denotes In the event of a positive response, do not schedule appointments.
T86 9463-9677 Sentence denotes Instead, inform the patient of the possible risk of being infected, the personal hygienic measures they need to follow, and that they will be reported to the competent health authorities for further investigations.
T87 9678-9847 Sentence denotes Only schedule an appointment in the dental office if the patient cannot be deferred or in urgent cases and according to the equipment and disposable materials available.
T88 9848-10038 Sentence denotes Assess the actual need for dental intervention before planning visits of the most vulnerable subjects (elderly or patients with respiratory, cardiovascular, or immune system diseases, etc.).
T89 10039-10079 Sentence denotes Where appropriate, postpone visits [14].
T90 10080-10272 Sentence denotes Avoid crowding by spreading appointments over time, maintaining distance in the waiting room and/or in the operating rooms (minimum safety distance of 2 m with a stay of less than 15 min) [4].
T91 10273-10458 Sentence denotes Arrange entry into the operating rooms of individual patients and a single companion for minors, without overcoats, electronic devices, and bags, which must be left in the waiting room.
T92 10459-10580 Sentence denotes In the event that personal effects should enter the operating rooms, these objects must be placed in special sealed bags.
T93 10581-10738 Sentence denotes Ensure that hand sanitizer is available to patients and companions, possibly at the entrance of the practice or anywhere before entering the operating rooms.
T94 10739-10999 Sentence denotes In the patient’s medical history, record the results of the telephone triage regarding the presence of suspicious and actual symptoms, potential contact with people who have been to risk areas, and the patient’s own transit/permanence in risk areas (Figure 2).
T95 11000-11129 Sentence denotes Remind the patient that, in case of necessity, it is mandatory to cough by covering their mouth and nose, possibly with a tissue.
T96 11130-11202 Sentence denotes The tissue must be disposed of immediately in a special waste container.
T97 11203-11265 Sentence denotes Following this, they must proceed to wash and disinfect hands.
T98 11266-11360 Sentence denotes Always allow fresh air in between one patient and another, and frequently in the waiting room.
T99 11361-11519 Sentence denotes This action could be performed by opening the windows, taking care of the air influx, or using medical-grade air purifiers as recommended by the manufacturer.
T100 11520-11726 Sentence denotes Consider all material that comes into direct or indirect contact with the patient and all material that has been used for patient treatment or has come in contact with any biological fluid as special waste.
T101 11727-11865 Sentence denotes Manage it according to the proper disposal techniques to ensure that any infectious materials cannot contaminate or spread to other areas.
T102 11866-11881 Sentence denotes Always use PPE.
T103 11882-12008 Sentence denotes The PPE should be used as described by the instructions contained in the user manual and must be disposed of as special waste.
T104 12009-12113 Sentence denotes Always check the integrity of the PPE, and, in the event of an integrity breach, eliminate PPE directly.
T105 12114-12132 Sentence denotes Use a medical cap.
T106 12133-12201 Sentence denotes Scrupulously observe hand hygiene (Figure 3, Figure 4 and Figure 5).
T107 12202-12264 Sentence denotes Before performing hand hygiene procedures, it is suggested to:
T108 12265-12305 Sentence denotes Expose forearms (bare below the elbows);
T109 12306-12340 Sentence denotes Remove all hand and wrist jewelry;
T110 12341-12380 Sentence denotes Ensure fingernails are clean and short.
T111 12381-12435 Sentence denotes Artificial nails or nail products are not recommended;
T112 12436-12491 Sentence denotes Cover all cuts or abrasions with a waterproof dressing.
T113 12492-12590 Sentence denotes Remove potentially contaminating objects from waiting rooms and operating rooms (magazines, etc.).
T114 12591-12733 Sentence denotes Regularly sanitize common and operational areas, non-medical furnishings and equipment, and surfaces accessible to the public (handles, etc.).
T115 12734-12825 Sentence denotes Place protections on points of sale (POSs), keyboards, etc. and change them after each use.
T116 12826-12942 Sentence denotes A single-use protection could be a disposable barrier (plastic film or cover) that must be replaced after every use.
T117 12943-13070 Sentence denotes Arrange the use of respiratory protective devices (RPDs) for all staff including secretarial staff (see section on PPEs below).
T118 13071-13186 Sentence denotes Inform doctors and collaborators concerning the clinical triage for COVID-19 and train them to evaluate themselves.
T119 13187-13441 Sentence denotes If they have manifested symptoms of a coronavirus infection (cough, cold, diarrhea, flu symptoms, temperature >37.5 °C) in the last 14 days, they should not come into the dental office and should report themselves to the competent health authorities [9].
T120 13442-13520 Sentence denotes Suggest intensifying personal hygiene procedures at the end of the work shift.
T121 13522-13526 Sentence denotes 3.2.
T122 13527-13544 Sentence denotes Specific Measures
T123 13545-13709 Sentence denotes Considering that each of the various dental disciplines has its operating peculiarities, it is appropriate to distinguish between particular precautions as follows.
T124 13711-13717 Sentence denotes 3.2.1.
T125 13718-13748 Sentence denotes Precautions in Operative Areas
T126 13749-13948 Sentence denotes The following procedures should be adopted:Protect the surfaces of all equipment and instruments with single-use disposable barriers, and dispose of the protections among the special waste after use.
T127 13949-14025 Sentence denotes Arrange only strictly necessary material on the surfaces of operating areas.
T128 14026-14117 Sentence denotes Clean the operative surfaces with hydroalcoholic disinfectants at concentrations above 60%.
T129 14118-14191 Sentence denotes Wear a uniform with long sleeves and shoes, and avoid exposed body parts.
T130 14192-14228 Sentence denotes Wear a disposable lab coat/overcoat.
T131 14229-14416 Sentence denotes It is also suggested that the patient mouth-rinse for 30 s with a 1% solution of hydrogen peroxide (1 part at 10-volume/3% hydrogen peroxide and 2 parts of water) or with 1% iodopovidone.
T132 14417-14509 Sentence denotes This pre-operative treatment could lower the virus concentration in the patient’s mouth [3].
T133 14510-14641 Sentence denotes Give preference to extra-oral radiological examinations over intra-oral ones to avoid the stimulation of coughing or vomiting [15].
T134 14643-14649 Sentence denotes 3.2.2.
T135 14650-14710 Sentence denotes Precautions from Procedures that Produce Droplets or Aerosol
T136 14711-15008 Sentence denotes The following procedures should be adopted in addition to the ones described above:Replace and sterilize the high- and low-speed hand-pieces after each use between one patient and the next; the use of 3-way turbines and dental units equipped with valves and anti-reflux systems is recommended [8].
T137 15009-15141 Sentence denotes Use RPDs and protective glasses for eye protection or full visors for all medical and paramedical staff in contact with the patient.
T138 15142-15305 Sentence denotes If not available, surgical masks with full visors can be used for all medical and paramedical staff in contact with the patient [3,16] (see section on PPEs below).
T139 15306-15386 Sentence denotes When possible, apply a rubber dam to reduce possible aerosol production [17,18].
T140 15388-15390 Sentence denotes 4.
T141 15391-15420 Sentence denotes Personal Protective Equipment
T142 15421-15596 Sentence denotes Wearing PPE provides a physical barrier that could prevent contact between medical and paramedical staff and the pathogen, as well as potentially infected biological material.
T143 15597-15700 Sentence denotes They must be worn and replaced at the end of each operating phase and disposed of in the special waste.
T144 15701-15801 Sentence denotes All protective devices must be replaced as soon as they are damaged or before loss of effectiveness.
T145 15803-15807 Sentence denotes 4.1.
T146 15808-15838 Sentence denotes Respiratory Protective Devices
T147 15839-15960 Sentence denotes Respiratory protective devices are commonly used to protect wearers from chemical, biological, and radioactive materials.
T148 15961-16212 Sentence denotes These devices have been classified by the US National Institute for Occupational Safety and Health (NIOSH), which sorts particulate filtering face-piece respirators (FFRs) into nine categories (N95, N99, N100, P95, P99, P100, R95, R99, and R100) [19].
T149 16213-16423 Sentence denotes The European Standard (EN 149:2001) classifies FFRs into three classes, FFP1, FFP2, and FFP3, with minimum respective filtration efficiencies of 80%, 94%, and 99% of the particles with a dimension up to 0.6 μm.
T150 16424-16464 Sentence denotes An FFP2 is comparable to a N95 FFR [20].
T151 16465-16573 Sentence denotes The various indications of how to use FFRs is related to their different capacity and quality of filtration.
T152 16574-16701 Sentence denotes Surgical masks (SMs) can filter particles of 0.04–1.3 μm, and are commonly used to physically block particles such as droplets.
T153 16702-16817 Sentence denotes Their principal limitation is due to poor quality of face fit and the consequent possibility of aerosol aspiration.
T154 16818-16923 Sentence denotes The use of SMs protects the patient from saliva and respiratory secretion produced by healthcare workers.
T155 16924-17034 Sentence denotes The FFP1 and FFP2 masks are available with or without an exhalation valve, and FFP3 masks always have a valve.
T156 17035-17162 Sentence denotes The FFP2 and FFP3 masks are the most appropriate barriers against aerosol because they provide a tight seal to the facial skin.
T157 17163-17354 Sentence denotes Considering that the air flow is filtered in the inhalation phase, but not filtered during exhalation (which is expelled from the valve), the infection risk is moved from operator to patient.
T158 17355-17581 Sentence denotes Masks with exhale valves are therefore not recommended for use in dentistry as this will increase the patient’s risk if the professional is infected with the virus, especially considering that the latter could be asymptomatic.
T159 17583-17589 Sentence denotes 4.1.1.
T160 17590-17601 Sentence denotes Indications
T161 17602-17748 Sentence denotes Wear a surgical mask in all eventualities where there is contact between the patient and other people less than 2 m away and for more than 15 min.
T162 17749-17831 Sentence denotes Wear an FFP2 or FFP3 mask in procedures with a risk of aerosol droplet production.
T163 17832-17893 Sentence denotes If not available, use a surgical mask with a face shield [3].
T164 17894-17973 Sentence denotes Remove the mask after each aerosol risk procedure by touching only the strings.
T165 17975-17981 Sentence denotes 4.1.2.
T166 17982-17997 Sentence denotes Common Mistakes
T167 17998-18062 Sentence denotes Removing the mask by touching the possibly contaminated surface.
T168 18063-18099 Sentence denotes The correct procedure is as follows:
T169 18100-18191 Sentence denotes After removing the gloves, put on a new pair of gloves, and remove the mask by the strings.
T170 18193-18197 Sentence denotes 4.2.
T171 18198-18204 Sentence denotes Gloves
T172 18206-18212 Sentence denotes 4.2.1.
T173 18213-18224 Sentence denotes Indications
T174 18225-18370 Sentence denotes Disposable gloves must be used in all operating phases that involve contact with potentially infected surfaces and for direct patient assistance.
T175 18371-18409 Sentence denotes Gloves should be inspected before use.
T176 18410-18469 Sentence denotes A double pair of gloves can serve as additional protection.
T177 18470-18572 Sentence denotes Before putting on gloves, cover any cuts or damaged portions of hand skin as an additional precaution.
T178 18573-18668 Sentence denotes After use, gloves should be removed using appropriate techniques to prevent hand contamination.
T179 18669-18767 Sentence denotes Gloves should be removed by rolling from the wrist towards the fingers to avoid contact with skin.
T180 18768-18847 Sentence denotes It is necessary to remove gloves by touching only the external part (Figure 6).
T181 18848-18921 Sentence denotes Use sterile gloves for invasive procedures that require surgical asepsis.
T182 18923-18929 Sentence denotes 4.2.2.
T183 18930-18945 Sentence denotes Common Mistakes
T184 18946-19031 Sentence denotes Using the same pair of gloves for different operations and/or for different patients.
T185 19032-19080 Sentence denotes Not washing hands before and after using gloves.
T186 19082-19086 Sentence denotes 4.3.
T187 19087-19110 Sentence denotes Face and Eye Protection
T188 19112-19118 Sentence denotes 4.3.1.
T189 19119-19130 Sentence denotes Indications
T190 19131-19247 Sentence denotes Eyes should be protected with goggles or a full-face shield in all procedures at risk of aerosol/droplet production.
T191 19248-19293 Sentence denotes Glasses, visors, or face shields can be used.
T192 19294-19399 Sentence denotes After every operation, depending on the kind of procedure, protections must be disposed of or sterilized.
T193 19401-19407 Sentence denotes 4.3.2.
T194 19408-19423 Sentence denotes Common Mistakes
T195 19424-19463 Sentence denotes Only using common prescription glasses.
T196 19464-19490 Sentence denotes Only using medical loupes.
T197 19491-19566 Sentence denotes Removing protections after each procedure by touching the external surface.
T198 19567-19600 Sentence denotes Strings must be used for removal.
T199 19602-19606 Sentence denotes 4.4.
T200 19607-19635 Sentence denotes Dental Uniform/Surgical Gown
T201 19637-19643 Sentence denotes 4.4.1.
T202 19644-19655 Sentence denotes Indications
T203 19656-19705 Sentence denotes Always use a uniform with long sleeves and shoes.
T204 19706-19735 Sentence denotes Change the uniform every day.
T205 19736-19812 Sentence denotes Before washing, disinfect with a chlorine solution (500 mg/L) for 30 s [18].
T206 19813-19919 Sentence denotes Wear a surgical gown (over the uniform) for each procedure at risk of contamination with aerosol/droplets.
T207 19920-19966 Sentence denotes Dispose of the surgical gown after each visit.
T208 19967-20048 Sentence denotes Remove the surgical gown before glove removal and touch it only from the outside.
T209 20049-20146 Sentence denotes Remove the surgical gown by folding it with the potentially contaminated external surface inside.
T210 20147-20220 Sentence denotes In case of contamination, replace the dental uniform as soon as possible.
T211 20222-20228 Sentence denotes 4.4.2.
T212 20229-20244 Sentence denotes Common Mistakes
T213 20245-20312 Sentence denotes Applying standard precautions when handling and replacing clothing.
T214 20313-20361 Sentence denotes Replacing the surgical gown after glove removal.
T215 20362-20419 Sentence denotes Removing the dental uniform without a new pair of gloves.
T216 20421-20425 Sentence denotes 4.5.
T217 20426-20461 Sentence denotes Recommended Sequence of PPE Removal
T218 20462-20482 Sentence denotes Remove any overcoat.
T219 20483-20562 Sentence denotes Remove the gloves by rolling them up from the wrist, without touching the skin.
T220 20563-20574 Sentence denotes Wash hands.
T221 20575-20629 Sentence denotes Wear a new pair of gloves to avoid accidental contact.
T222 20630-20750 Sentence denotes Remove the protective goggles or visor and mask, taking care to touch only the strings and not the contaminated surface.
T223 20751-20769 Sentence denotes Remove the gloves.
T224 20770-20781 Sentence denotes Wash hands.
T225 20783-20785 Sentence denotes 5.
T226 20786-20796 Sentence denotes Discussion
T227 20797-20979 Sentence denotes The pandemic infection of SARS-CoV-2 could have a profound impact on dentistry, mainly due to the way the pathogen is passed on, which poses a danger in almost all dental procedures.
T228 20980-21146 Sentence denotes The virus predominantly spreads through droplets and aerosol, requiring a revision of the cross-infection prevention protocol to include SARS-CoV-2 related risks [3].
T229 21147-21388 Sentence denotes Especially when treating in urgent situations or emergencies during the virus pandemic [6], clinicians should not underestimate the possibility of infection from asymptomatic patients, and all dental treatment should be considered high-risk.
T230 21389-21658 Sentence denotes The dentist should always use the recommended personal protective equipment, including filtering face-piece respirators that could prevent aerosol infection and protective glasses or face shields that could prevent droplets from coming into contact with the eye mucosa.
T231 21659-21839 Sentence denotes The management of patients should include a proper pre-treatment telephonic triage to screen out patients at risk of contagion and follow an appropriate schedule to avoid crowding.
T232 21841-21843 Sentence denotes 6.
T233 21844-21855 Sentence denotes Conclusions
T234 21856-22001 Sentence denotes In this paper, the most appropriate procedures were discussed and suggested to minimize the risk of infection in every aspect of dental practice.
T235 22003-22010 Sentence denotes Funding
T236 22011-22054 Sentence denotes This research received no external funding.
T237 22056-22077 Sentence denotes Conflicts of Interest
T238 22078-22122 Sentence denotes The author declares no conflict of interest.
T239 22124-22243 Sentence denotes Figure 1 Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) route of transmission of in healthcare settings.
T240 22244-22328 Sentence denotes Figure 2 Additional questions to the medical record for SARS-CoV-2 (12 March 2020).
T241 22329-22540 Sentence denotes Figure 3 Moments For Hand Hygiene [from WHO Clean care is safer care Your 5 Moments for Hand Hygiene https://www.who.int/gpsc/5may/tools/workplace_reminders/en/ Revised August 2009 (Accessed on 24 March 2020)].
T242 22541-22595 Sentence denotes Figure 4 How to Hand Wash? [From: WHO Patient safety.
T243 22596-22609 Sentence denotes Hand Hygiene:
T244 22610-22626 Sentence denotes Why, How & When?
T245 22627-22736 Sentence denotes Revised August 2009 https://www.who.int/gpsc/5may/tools/workplace_reminders/en/ (Accessed on 24 March 2020)].
T246 22737-22790 Sentence denotes Figure 5 How to Hand Rub? [From: WHO Patient safety.
T247 22791-22804 Sentence denotes Hand Hygiene:
T248 22805-22821 Sentence denotes Why, How & When?
T249 22822-22931 Sentence denotes Revised August 2009 https://www.who.int/gpsc/5may/tools/workplace_reminders/en/ (Accessed on 24 March 2020)].
T250 22932-22963 Sentence denotes Figure 6 How to remove gloves.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 3177-3185 Phenotype denotes coughing http://purl.obolibrary.org/obo/HP_0012735
T2 4569-4578 Phenotype denotes dry cough http://purl.obolibrary.org/obo/HP_0031246
T3 4580-4587 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T4 4589-4597 Phenotype denotes asthenia http://purl.obolibrary.org/obo/HP_0025406
T5 4599-4610 Phenotype denotes muscle pain http://purl.obolibrary.org/obo/HP_0003326
T6 4612-4620 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T7 4622-4633 Phenotype denotes sore throat http://purl.obolibrary.org/obo/HP_0033050
T8 4635-4643 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T9 4649-4657 Phenotype denotes vomiting http://purl.obolibrary.org/obo/HP_0002013
T10 4807-4816 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T11 4917-4926 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T12 5032-5039 Phenotype denotes Dyspnea http://purl.obolibrary.org/obo/HP_0002094
T13 5047-5056 Phenotype denotes hypoxemia http://purl.obolibrary.org/obo/HP_0012418
T14 5145-5165 Phenotype denotes Respiratory Distress http://purl.obolibrary.org/obo/HP_0002098
T15 5190-5195 Phenotype denotes shock http://purl.obolibrary.org/obo/HP_0031273
T16 5201-5209 Phenotype denotes acidosis http://purl.obolibrary.org/obo/HP_0001941
T17 5728-5738 Phenotype denotes vasculitis http://purl.obolibrary.org/obo/HP_0002633
T18 5781-5790 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T19 11066-11071 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T20 13248-13253 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T21 13261-13269 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T22 14615-14623 Phenotype denotes coughing http://purl.obolibrary.org/obo/HP_0012735
T23 14627-14635 Phenotype denotes vomiting http://purl.obolibrary.org/obo/HP_0002013
T24 16806-16816 Phenotype denotes aspiration http://purl.obolibrary.org/obo/HP_0002835