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PMC:7243778 / 6302-7703 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
150 860-864 Gene denotes ACE2 Gene:59272
151 10-15 Species denotes human Tax:9606
152 16-29 Species denotes coronaviruses Tax:11118
153 36-45 Species denotes HCoV-229E Tax:11137
154 57-66 Species denotes HCoV-OC43 Tax:31631
155 157-174 Species denotes betacoronaviruses Tax:694002
156 355-363 Species denotes SARS-CoV Tax:694009
157 445-456 Species denotes coronavirus Tax:11118
158 477-482 Species denotes human Tax:9606
159 664-670 Species denotes people Tax:9606
160 725-733 Species denotes patients Tax:9606
161 758-769 Species denotes coronavirus Tax:11118
162 821-826 Species denotes human Tax:9606
163 929-946 Species denotes masked palm civet Tax:9675
164 948-962 Species denotes Paguma larvata Tax:9675
165 1047-1053 Species denotes humans Tax:9606
166 1092-1106 Species denotes Horseshoe bats Tax:49442
167 1168-1176 Species denotes SARS-CoV Tax:694009
168 1257-1262 Species denotes human Tax:9606
169 1305-1310 Species denotes human Tax:9606
170 1370-1376 Species denotes humans Tax:9606
171 30-34 Species denotes 229E Tax:11137
172 51-55 Species denotes OC43 Tax:31631
173 548-575 Disease denotes acute respiratory syndromes MESH:D012120
174 655-663 Disease denotes infected MESH:D007239
175 682-691 Disease denotes mortality MESH:D003643

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T28 936-940 Body_part denotes palm http://purl.org/sig/ont/fma/fma24920
T29 1311-1315 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T17 355-363 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T18 541-575 Disease denotes severe acute respiratory syndromes http://purl.obolibrary.org/obo/MONDO_0005091
T19 1168-1176 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T63 10-15 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T64 185-192 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T65 270-277 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T66 477-482 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T67 500-505 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T68 680-681 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T69 775-781 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T70 821-826 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T71 886-888 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T72 901-904 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T73 1005-1012 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T74 1047-1053 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T75 1055-1056 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T76 1102-1106 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T77 1257-1262 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T78 1305-1321 http://www.ebi.ac.uk/cellline#human_cell_line denotes human cell lines
T79 1344-1349 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T80 1370-1376 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T21 827-838 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T52 0-175 Sentence denotes The first human coronaviruses 229E (HCoV-229E) and OC43 (HCoV-OC43) were isolated in the 1960s and are now classified respectively as alphacoronaviruses and betacoronaviruses.
T53 176-336 Sentence denotes As these viruses were not very pathogenic and often associated with colds [8], this family of viruses attracted little interest from scientists until the 2000s.
T54 337-494 Sentence denotes In November 2002, SARS-CoV, first reported in Guangdong province, China, became the first highly pathogenic coronavirus that emerged in the human population.
T55 495-743 Sentence denotes This virus was responsible for an epidemic of severe acute respiratory syndromes that started in China before spreading rapidly over the world with around 8000 infected people and with a mortality rate of around 10%, depending on patients' age [9].
T56 744-897 Sentence denotes However, this coronavirus from animal origin was initially unable to use the human angiotensin 2 converting enzyme (ACE2) as receptor [[10], [11], [12]].
T57 898-1054 Sentence denotes It has been suggested that the masked palm civet (Paguma larvata) may be an intermediate host in which the viruses have adapted to ultimately infect humans.
T58 1055-1177 Sentence denotes A recent study suggests that Chinese Horseshoe bats in the family Rhinolophidae may be the natural reservoir for SARS-CoV.
T59 1178-1401 Sentence denotes One of these two viral isolates in this study, WIV1, was able to recognize the human ACE2 receptor and to replicate in certain human cell lines, suggesting that this virus can directly infect humans without adaptation [13].

2_test

Id Subject Object Predicate Lexical cue
32450171-15577937-66454444 740-741 15577937 denotes 9
32450171-16169905-66454445 880-882 16169905 denotes 10
32450171-19788804-66454446 892-894 19788804 denotes 12
32450171-24172901-66454447 1397-1399 24172901 denotes 13