PMC:7243778 / 16607-17005
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id | tao:has_standard_notation |
|---|---|---|---|---|---|---|
| 384 | 138-141 | Gene | denotes | Trx | Gene:7295 | |
| 385 | 341-344 | Gene | denotes | Trx | Gene:7295 | |
| 386 | 322-330 | Species | denotes | SARS-CoV | Tax:694009 | |
| 387 | 331-339 | Species | denotes | patients | Tax:9606 | |
| 388 | 198-201 | Chemical | denotes | Leu | MESH:D007930 | |
| 389 | 209-236 | Mutation | denotes | Ala 828 and Pro 1061 to Ser | p.A,P828,1061S |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T75 | 129-137 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T57 | 322-330 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T200 | 5-7 | http://purl.obolibrary.org/obo/CLO_0008922 | denotes | S2 |
| T201 | 5-7 | http://purl.obolibrary.org/obo/CLO_0050052 | denotes | S2 |
| T202 | 46-47 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T203 | 48-55 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptide |
| T204 | 67-69 | http://purl.obolibrary.org/obo/CLO_0001627 | denotes | aa |
| T205 | 104-112 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activity |
| T206 | 114-116 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 48 |
| T207 | 153-155 | http://purl.obolibrary.org/obo/CLO_0002988 | denotes | F9 |
| T208 | 153-155 | http://purl.obolibrary.org/obo/CLO_0050537 | denotes | F9 |
| T209 | 153-155 | http://purl.obolibrary.org/obo/CLO_0050539 | denotes | F9 |
| T210 | 264-266 | http://purl.obolibrary.org/obo/CLO_0008922 | denotes | S2 |
| T211 | 264-266 | http://purl.obolibrary.org/obo/CLO_0050052 | denotes | S2 |
| T212 | 385-392 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animals |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T99 | 5-7 | Chemical | denotes | S2 | http://purl.obolibrary.org/obo/CHEBI_29387 |
| T100 | 48-55 | Chemical | denotes | peptide | http://purl.obolibrary.org/obo/CHEBI_16670 |
| T101 | 129-137 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T102 | 198-201 | Chemical | denotes | Leu | http://purl.obolibrary.org/obo/CHEBI_15603|http://purl.obolibrary.org/obo/CHEBI_25017|http://purl.obolibrary.org/obo/CHEBI_30006 |
| T105 | 209-212 | Chemical | denotes | Ala | http://purl.obolibrary.org/obo/CHEBI_16977|http://purl.obolibrary.org/obo/CHEBI_46217 |
| T107 | 221-224 | Chemical | denotes | Pro | http://purl.obolibrary.org/obo/CHEBI_50342 |
| T108 | 233-236 | Chemical | denotes | Ser | http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999 |
| T110 | 264-266 | Chemical | denotes | S2 | http://purl.obolibrary.org/obo/CHEBI_29387 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T130 | 0-45 | Sentence | denotes | Some S2 epitopes inducing nAbs were reported. |
| T131 | 46-118 | Sentence | denotes | A peptide containing aa 1055–1192 can elicit neutralizing activity [48]. |
| T132 | 119-340 | Sentence | denotes | Two other proteins Trx-F3 and Trx-F9 containing linear antigenic determinants (Leu 803 to Ala 828 and Pro 1061 to Ser 1093, respectively) on the S2 domain were identified by using sera from convalescent SARS-CoV patients. |
| T133 | 341-398 | Sentence | denotes | Trx-F3 was capable of inducing nAbs in some animals [49]. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32450171-15731223-66454475 | 114-116 | 15731223 | denotes | 48 |
| 32450171-15194770-66454476 | 394-396 | 15194770 | denotes | 49 |