PMC:7243768 / 26642-27312
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1029 | 5-13 | Species | denotes | MERS-CoV | Tax:1335626 |
1041 | 167-170 | Gene | denotes | IFN | Gene:3439 |
1042 | 218-223 | Gene | denotes | THP-1 | Gene:2736 |
1043 | 344-348 | Gene | denotes | CCL3 | Gene:6348 |
1044 | 350-354 | Gene | denotes | CCL2 | Gene:6347 |
1045 | 356-360 | Gene | denotes | IL-2 | Gene:3558 |
1046 | 362-366 | Gene | denotes | IL-8 | Gene:3576 |
1047 | 372-377 | Gene | denotes | CCL-5 | Gene:6352 |
1048 | 39-47 | Species | denotes | SARS-CoV | Tax:694009 |
1049 | 253-258 | Species | denotes | human | Tax:9606 |
1050 | 66-75 | Disease | denotes | infection | MESH:D007239 |
1051 | 436-454 | Disease | denotes | MERS-CoV infection | MESH:D018352 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T239 | 90-106 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
T240 | 101-106 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T241 | 153-162 | Body_part | denotes | cytokines | http://purl.org/sig/ont/fma/fma84050 |
T242 | 209-214 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T243 | 225-235 | Body_part | denotes | macrophage | http://purl.org/sig/ont/fma/fma63261 |
T244 | 270-275 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
T245 | 277-292 | Body_part | denotes | dendritic cells | http://purl.org/sig/ont/fma/fma273565 |
T246 | 287-292 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T247 | 325-335 | Body_part | denotes | chemokines | http://purl.org/sig/ont/fma/fma241981 |
T248 | 356-360 | Body_part | denotes | IL-2 | http://purl.org/sig/ont/fma/fma84051 |
T249 | 399-408 | Body_part | denotes | cytokines | http://purl.org/sig/ont/fma/fma84050 |
T250 | 503-511 | Body_part | denotes | cytokine | http://purl.org/sig/ont/fma/fma84050 |
T251 | 516-525 | Body_part | denotes | chemokine | http://purl.org/sig/ont/fma/fma241981 |
T252 | 568-576 | Body_part | denotes | monocyte | http://purl.org/sig/ont/fma/fma62864 |
T253 | 578-588 | Body_part | denotes | neutrophil | http://purl.org/sig/ont/fma/fma62860 |
T254 | 609-613 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T255 | 629-634 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T122 | 270-275 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T123 | 609-613 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T124 | 629-634 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T308 | 39-47 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T309 | 39-43 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T310 | 66-75 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T311 | 445-454 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T358 | 59-62 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T359 | 83-89 | http://purl.obolibrary.org/obo/UBERON_0001005 | denotes | airway |
T360 | 90-100 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
T361 | 101-106 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T362 | 174-175 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T363 | 209-214 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T364 | 218-223 | http://purl.obolibrary.org/obo/CLO_0009348 | denotes | THP-1 |
T365 | 218-223 | http://purl.obolibrary.org/obo/CLO_0050999 | denotes | THP-1 |
T366 | 218-223 | http://purl.obolibrary.org/obo/CLO_0051914 | denotes | THP-1 |
T367 | 253-258 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T368 | 270-275 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T369 | 270-275 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T370 | 277-292 | http://purl.obolibrary.org/obo/CL_0000451 | denotes | dendritic cells |
T371 | 356-360 | http://purl.obolibrary.org/obo/PR_000001379 | denotes | IL-2 |
T372 | 362-366 | http://purl.obolibrary.org/obo/CLO_0053704 | denotes | IL-8 |
T373 | 412-413 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T374 | 568-576 | http://purl.obolibrary.org/obo/CL_0000576 | denotes | monocyte |
T375 | 609-613 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T376 | 609-613 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T377 | 629-634 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T378 | 629-634 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T114 | 218-221 | Chemical | denotes | THP | http://purl.obolibrary.org/obo/CHEBI_46941 |
T115 | 356-358 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
T117 | 362-364 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
T119 | 372-375 | Chemical | denotes | CCL | http://purl.obolibrary.org/obo/CHEBI_3478 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T180 | 0-29 | Sentence | denotes | 5.5 MERS-CoV-immunopathology |
T181 | 30-196 | Sentence | denotes | Like the SARS-CoV, MERS also has an infection in the airway epithelial cells, which enhances the level of pro-inflammatory cytokines and IFN in a delayed manner [81]. |
T182 | 197-463 | Sentence | denotes | Even in the cells of THP-1, macrophage-derived from the human peripheral blood, dendritic cells showed an elevated level of the chemokines such as CCL3, CCL2, IL-2, IL-8, and CCL-5 and pro-inflammatory cytokines in a delayed manner during MERS-CoV infection [82,83]. |
T183 | 464-670 | Sentence | denotes | The high level of the pro-inflammatory cytokine and chemokine associated with the enhanced level of the monocyte, neutrophil numbers in both the lung and peripheral blood, which leads to immune damage [84]. |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32450165-24077366-66451069 | 192-194 | 24077366 | denotes | 81 |
32450165-26602089-66451070 | 456-458 | 26602089 | denotes | 82 |
32450165-24065148-66451071 | 459-461 | 24065148 | denotes | 83 |
32450165-27709848-66451072 | 666-668 | 27709848 | denotes | 84 |