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PMC:7243768 / 26642-27312 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1029 5-13 Species denotes MERS-CoV Tax:1335626
1041 167-170 Gene denotes IFN Gene:3439
1042 218-223 Gene denotes THP-1 Gene:2736
1043 344-348 Gene denotes CCL3 Gene:6348
1044 350-354 Gene denotes CCL2 Gene:6347
1045 356-360 Gene denotes IL-2 Gene:3558
1046 362-366 Gene denotes IL-8 Gene:3576
1047 372-377 Gene denotes CCL-5 Gene:6352
1048 39-47 Species denotes SARS-CoV Tax:694009
1049 253-258 Species denotes human Tax:9606
1050 66-75 Disease denotes infection MESH:D007239
1051 436-454 Disease denotes MERS-CoV infection MESH:D018352

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T239 90-106 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T240 101-106 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T241 153-162 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T242 209-214 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T243 225-235 Body_part denotes macrophage http://purl.org/sig/ont/fma/fma63261
T244 270-275 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T245 277-292 Body_part denotes dendritic cells http://purl.org/sig/ont/fma/fma273565
T246 287-292 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T247 325-335 Body_part denotes chemokines http://purl.org/sig/ont/fma/fma241981
T248 356-360 Body_part denotes IL-2 http://purl.org/sig/ont/fma/fma84051
T249 399-408 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T250 503-511 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T251 516-525 Body_part denotes chemokine http://purl.org/sig/ont/fma/fma241981
T252 568-576 Body_part denotes monocyte http://purl.org/sig/ont/fma/fma62864
T253 578-588 Body_part denotes neutrophil http://purl.org/sig/ont/fma/fma62860
T254 609-613 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T255 629-634 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T122 270-275 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T123 609-613 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T124 629-634 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T308 39-47 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T309 39-43 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T310 66-75 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T311 445-454 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T358 59-62 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T359 83-89 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airway
T360 90-100 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T361 101-106 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T362 174-175 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T363 209-214 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T364 218-223 http://purl.obolibrary.org/obo/CLO_0009348 denotes THP-1
T365 218-223 http://purl.obolibrary.org/obo/CLO_0050999 denotes THP-1
T366 218-223 http://purl.obolibrary.org/obo/CLO_0051914 denotes THP-1
T367 253-258 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T368 270-275 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T369 270-275 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T370 277-292 http://purl.obolibrary.org/obo/CL_0000451 denotes dendritic cells
T371 356-360 http://purl.obolibrary.org/obo/PR_000001379 denotes IL-2
T372 362-366 http://purl.obolibrary.org/obo/CLO_0053704 denotes IL-8
T373 412-413 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T374 568-576 http://purl.obolibrary.org/obo/CL_0000576 denotes monocyte
T375 609-613 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T376 609-613 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T377 629-634 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T378 629-634 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T114 218-221 Chemical denotes THP http://purl.obolibrary.org/obo/CHEBI_46941
T115 356-358 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T117 362-364 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T119 372-375 Chemical denotes CCL http://purl.obolibrary.org/obo/CHEBI_3478

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T180 0-29 Sentence denotes 5.5 MERS-CoV-immunopathology
T181 30-196 Sentence denotes Like the SARS-CoV, MERS also has an infection in the airway epithelial cells, which enhances the level of pro-inflammatory cytokines and IFN in a delayed manner [81].
T182 197-463 Sentence denotes Even in the cells of THP-1, macrophage-derived from the human peripheral blood, dendritic cells showed an elevated level of the chemokines such as CCL3, CCL2, IL-2, IL-8, and CCL-5 and pro-inflammatory cytokines in a delayed manner during MERS-CoV infection [82,83].
T183 464-670 Sentence denotes The high level of the pro-inflammatory cytokine and chemokine associated with the enhanced level of the monocyte, neutrophil numbers in both the lung and peripheral blood, which leads to immune damage [84].

2_test

Id Subject Object Predicate Lexical cue
32450165-24077366-66451069 192-194 24077366 denotes 81
32450165-26602089-66451070 456-458 26602089 denotes 82
32450165-24065148-66451071 459-461 24065148 denotes 83
32450165-27709848-66451072 666-668 27709848 denotes 84