PMC:7243768 / 20447-21489
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
817 | 273-281 | Species | denotes | MERS-CoV | Tax:1335626 |
818 | 312-321 | Species | denotes | dromedary | Tax:9838 |
819 | 322-328 | Species | denotes | camels | Tax:9838 |
820 | 384-390 | Species | denotes | humans | Tax:9606 |
821 | 401-409 | Species | denotes | MERS-CoV | Tax:1335626 |
822 | 436-449 | Species | denotes | coronaviruses | Tax:11118 |
823 | 580-585 | Species | denotes | human | Tax:9606 |
824 | 673-681 | Species | denotes | MERS-CoV | Tax:1335626 |
825 | 869-877 | Species | denotes | patients | Tax:9606 |
826 | 600-606 | Chemical | denotes | serine | MESH:D012694 |
827 | 77-82 | Disease | denotes | fever | MESH:D005334 |
828 | 84-93 | Disease | denotes | dry cough | MESH:D003371 |
829 | 99-118 | Disease | denotes | shortness of breath | MESH:D004417 |
830 | 132-151 | Disease | denotes | respiratory illness | MESH:D012140 |
831 | 232-240 | Disease | denotes | infected | MESH:D007239 |
832 | 830-839 | Disease | denotes | mortality | MESH:D003643 |
833 | 856-868 | Disease | denotes | CoV infected | MESH:D018352 |
834 | 919-942 | Disease | denotes | cardiovascular diseases | MESH:D002318 |
835 | 952-966 | Disease | denotes | renal diseases | MESH:D007674 |
836 | 968-980 | Disease | denotes | hypertension | MESH:D006973 |
837 | 982-999 | Disease | denotes | diabetes mellitus | MESH:D003920 |
838 | 1001-1007 | Disease | denotes | cancer | MESH:D009369 |
839 | 1013-1033 | Disease | denotes | respiratory diseases | MESH:D012140 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T198 | 586-591 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T199 | 600-606 | Body_part | denotes | serine | http://purl.org/sig/ont/fma/fma82764 |
T200 | 663-669 | Body_part | denotes | genome | http://purl.org/sig/ont/fma/fma84116 |
T201 | 721-724 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
T202 | 743-754 | Body_part | denotes | nucleotides | http://purl.org/sig/ont/fma/fma82740 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T252 | 483-487 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T253 | 499-502 | Disease | denotes | flu | http://purl.obolibrary.org/obo/MONDO_0005812 |
T254 | 919-942 | Disease | denotes | cardiovascular diseases | http://purl.obolibrary.org/obo/MONDO_0004995 |
T255 | 944-966 | Disease | denotes | chronic renal diseases | http://purl.obolibrary.org/obo/MONDO_0005300 |
T256 | 968-980 | Disease | denotes | hypertension | http://purl.obolibrary.org/obo/MONDO_0005044 |
T257 | 982-999 | Disease | denotes | diabetes mellitus | http://purl.obolibrary.org/obo/MONDO_0005015 |
T258 | 1001-1007 | Disease | denotes | cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
T259 | 1013-1033 | Disease | denotes | respiratory diseases | http://purl.obolibrary.org/obo/MONDO_0005087 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T296 | 31-32 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T297 | 37-42 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T298 | 302-306 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bats |
T299 | 322-328 | http://purl.obolibrary.org/obo/NCBITaxon_9837 | denotes | camels |
T300 | 384-390 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
T301 | 461-462 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T302 | 472-477 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T303 | 503-510 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
T304 | 542-547 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T305 | 580-591 | http://purl.obolibrary.org/obo/CLO_0053065 | denotes | human cells |
T306 | 694-695 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T307 | 759-761 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T96 | 427-432 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
T97 | 600-606 | Chemical | denotes | serine | http://purl.obolibrary.org/obo/CHEBI_17822 |
T98 | 743-754 | Chemical | denotes | nucleotides | http://purl.obolibrary.org/obo/CHEBI_36976 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T139 | 0-157 | Sentence | denotes | In Saudi Arabia, in June 2012, a new virus outbreak took place, which caused fever, dry cough, and shortness of breath resulting in respiratory illness [59]. |
T140 | 158-248 | Sentence | denotes | The disease spreads from person to person through direct contact with the infected person. |
T141 | 249-396 | Sentence | denotes | It is believed that the MERS-CoV had originated from bats, and dromedary camels are intermediate hosts for transmitting the disease to humans [60]. |
T142 | 397-511 | Sentence | denotes | The MERS-CoV belongs to the β group of coronaviruses, and it is a distinct virus from SARS and common flu viruses. |
T143 | 512-658 | Sentence | denotes | The incubation period of this virus is 2–13 days, and it enters the human cells through serine peptidase, dipeptidyl peptidase4 receptors [28,61]. |
T144 | 659-787 | Sentence | denotes | The genome of MERS-CoV consists of a single positive-stranded RNA comprising 30,119 nucleotides and 11 open reading frames [62]. |
T145 | 788-1042 | Sentence | denotes | The clinical risk factors determining the mortality rate among MERS-CoV infected patients were age, sex, and comorbidities such as cardiovascular diseases, chronic renal diseases, hypertension, diabetes mellitus, cancer, and respiratory diseases [63,64]. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T101 | 77-82 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
T102 | 84-93 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
T103 | 99-118 | Phenotype | denotes | shortness of breath | http://purl.obolibrary.org/obo/HP_0002098 |
T104 | 132-151 | Phenotype | denotes | respiratory illness | http://purl.obolibrary.org/obo/HP_0002086 |
T105 | 919-942 | Phenotype | denotes | cardiovascular diseases | http://purl.obolibrary.org/obo/HP_0001626 |
T106 | 968-980 | Phenotype | denotes | hypertension | http://purl.obolibrary.org/obo/HP_0000822 |
T107 | 982-999 | Phenotype | denotes | diabetes mellitus | http://purl.obolibrary.org/obo/HP_0000819 |
T108 | 1001-1007 | Phenotype | denotes | cancer | http://purl.obolibrary.org/obo/HP_0002664 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32450165-27255185-66451048 | 153-155 | 27255185 | denotes | 59 |
32450165-26049252-66451049 | 392-394 | 26049252 | denotes | 60 |
32450165-26695637-66451050 | 654-656 | 26695637 | denotes | 61 |
32450165-29716568-66451051 | 1035-1037 | 29716568 | denotes | 63 |
32450165-27899100-66451052 | 1038-1040 | 27899100 | denotes | 64 |