PMC:7243768 / 17798-18750
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 665 | 5-13 | Species | denotes | SARS-CoV | Tax:694009 |
| 679 | 830-866 | Gene | denotes | monokine induced by gamma interferon | Gene:4283 |
| 680 | 868-871 | Gene | denotes | Mig | Gene:4283 |
| 681 | 23-36 | Species | denotes | Coronaviruses | Tax:11118 |
| 682 | 189-197 | Species | denotes | SARS-CoV | Tax:694009 |
| 683 | 501-509 | Species | denotes | SARS-CoV | Tax:694009 |
| 684 | 589-597 | Species | denotes | patients | Tax:9606 |
| 685 | 886-893 | Species | denotes | patient | Tax:9606 |
| 686 | 175-183 | Disease | denotes | infected | MESH:D007239 |
| 687 | 337-368 | Disease | denotes | central nervous system symptoms | MESH:D002493 |
| 688 | 377-385 | Disease | denotes | delirium | MESH:D003693 |
| 689 | 561-569 | Disease | denotes | infected | MESH:D007239 |
| 690 | 658-666 | Disease | denotes | infected | MESH:D007239 |
| 691 | 730-745 | Disease | denotes | viral infection | MESH:D001102 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T162 | 14-17 | Body_part | denotes | CNS | http://purl.org/sig/ont/fma/fma55675 |
| T163 | 81-103 | Body_part | denotes | central nervous system | http://purl.org/sig/ont/fma/fma55675 |
| T164 | 337-359 | Body_part | denotes | central nervous system | http://purl.org/sig/ont/fma/fma55675 |
| T165 | 444-449 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
| T166 | 450-456 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
| T167 | 645-650 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T168 | 667-672 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
| T169 | 673-678 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T170 | 702-707 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
| T171 | 813-822 | Body_part | denotes | chemokine | http://purl.org/sig/ont/fma/fma241981 |
| T172 | 896-901 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T86 | 14-17 | Body_part | denotes | CNS | http://purl.obolibrary.org/obo/UBERON_0001017 |
| T87 | 81-103 | Body_part | denotes | central nervous system | http://purl.obolibrary.org/obo/UBERON_0001017 |
| T88 | 89-103 | Body_part | denotes | nervous system | http://purl.obolibrary.org/obo/UBERON_0001016 |
| T89 | 337-359 | Body_part | denotes | central nervous system | http://purl.obolibrary.org/obo/UBERON_0001017 |
| T90 | 345-359 | Body_part | denotes | nervous system | http://purl.obolibrary.org/obo/UBERON_0001016 |
| T91 | 444-449 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
| T92 | 450-456 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T93 | 667-672 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
| T94 | 702-707 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
| T95 | 896-901 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T225 | 5-13 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T226 | 5-9 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T227 | 67-103 | Disease | denotes | infecting the central nervous system | http://purl.obolibrary.org/obo/MONDO_0024619 |
| T228 | 189-197 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T229 | 189-193 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T230 | 268-270 | Disease | denotes | he | http://purl.obolibrary.org/obo/MONDO_0017319 |
| T231 | 377-385 | Disease | denotes | delirium | http://purl.obolibrary.org/obo/MONDO_0045057 |
| T232 | 419-421 | Disease | denotes | he | http://purl.obolibrary.org/obo/MONDO_0017319 |
| T233 | 501-509 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T234 | 501-505 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T235 | 543-545 | Disease | denotes | he | http://purl.obolibrary.org/obo/MONDO_0017319 |
| T236 | 730-745 | Disease | denotes | viral infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T237 | 736-745 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T260 | 14-17 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | CNS |
| T261 | 14-17 | http://www.ebi.ac.uk/efo/EFO_0000908 | denotes | CNS |
| T262 | 14-17 | http://purl.obolibrary.org/obo/UBERON_0001017 | denotes | CNS |
| T263 | 43-44 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T264 | 81-103 | http://purl.obolibrary.org/obo/UBERON_0001017 | denotes | central nervous system |
| T265 | 81-103 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | central nervous system |
| T266 | 81-103 | http://www.ebi.ac.uk/efo/EFO_0000908 | denotes | central nervous system |
| T267 | 119-120 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T268 | 145-146 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T269 | 337-359 | http://purl.obolibrary.org/obo/UBERON_0001017 | denotes | central nervous system |
| T270 | 337-359 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | central nervous system |
| T271 | 337-359 | http://www.ebi.ac.uk/efo/EFO_0000908 | denotes | central nervous system |
| T272 | 410-411 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T273 | 444-449 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
| T274 | 444-449 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
| T275 | 510-515 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T276 | 645-650 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T277 | 667-672 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
| T278 | 667-672 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
| T279 | 673-678 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T280 | 702-707 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
| T281 | 702-707 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
| T282 | 811-812 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T283 | 896-901 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
| T284 | 896-901 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T76 | 850-855 | Chemical | denotes | gamma | http://purl.obolibrary.org/obo/CHEBI_30212 |
| T77 | 856-866 | Chemical | denotes | interferon | http://purl.obolibrary.org/obo/CHEBI_52999 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T25 | 730-745 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infection |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T122 | 0-22 | Sentence | denotes | 4.6 SARS-CoV-CNS risk |
| T123 | 23-118 | Sentence | denotes | Coronaviruses share a common inclination in infecting the central nervous system in some cases. |
| T124 | 119-244 | Sentence | denotes | A case was reported where a 39 years old doctor who got infected with SARS-CoV exhibited usual symptoms and was hospitalized. |
| T125 | 245-403 | Sentence | denotes | After hospitalization, he was presented with eyesight problems and later started exhibiting central nervous system symptoms such as delirium and restlessness. |
| T126 | 404-434 | Sentence | denotes | After a month, he passed away. |
| T127 | 435-516 | Sentence | denotes | When his brain tissue was examined, this revealed the presence of SARS-CoV virus. |
| T128 | 517-746 | Sentence | denotes | The doctors reported that he might have got infected while treating the patients, and also the chemotactic attraction of immune cells by the infected brain cells might have injured the brain more than that of the viral infection. |
| T129 | 747-952 | Sentence | denotes | The chemotactic attraction was characterized by the presence of a chemokine called monokine induced by gamma interferon (Mig) found in the patient's brain and the bloodstream [54] (represented in Table 1). |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T96 | 377-385 | Phenotype | denotes | delirium | http://purl.obolibrary.org/obo/HP_0031258 |
| T97 | 390-402 | Phenotype | denotes | restlessness | http://purl.obolibrary.org/obo/HP_0000711 |