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PMC:7242012 / 485-2024 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
32 238-255 Species denotes novel coronavirus Tax:2697049
33 257-266 Species denotes 2019‐nCoV Tax:2697049
34 337-346 Species denotes 2019‐nCoV Tax:2697049
35 352-365 Species denotes coronaviruses Tax:11118
36 495-518 Species denotes human coronavirus, SARS Tax:694009
37 519-522 Species denotes CoV Tax:11118
38 615-625 Species denotes SARS‐CoV‐2 Tax:2697049
39 733-743 Species denotes SARS‐CoV‐2 Tax:2697049
40 813-823 Species denotes SARS‐CoV‐2 Tax:2697049
41 1287-1297 Species denotes SARS‐CoV‐2 Tax:2697049
42 1348-1356 Species denotes patients Tax:9606
43 82-91 Disease denotes pneumonia MESH:D011014
44 93-112 Disease denotes respiratory failure MESH:D012131
45 118-123 Disease denotes death MESH:D003643
46 544-570 Disease denotes acute respiratory syndrome MESH:D012120
47 768-792 Disease denotes coronavirus disease 2019 MESH:C000657245
48 794-802 Disease denotes COVID‐19 MESH:C000657245
49 1194-1202 Disease denotes COVID‐19 MESH:C000657245
50 1362-1370 Disease denotes COVID‐19 MESH:C000657245
51 1411-1431 Disease denotes SARS‐CoV‐2 infection MESH:C000657245
52 1473-1481 Disease denotes COVID‐19 MESH:C000657245
53 1521-1529 Disease denotes COVID‐19 MESH:C000657245

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T7 82-91 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T8 93-112 Disease denotes respiratory failure http://purl.obolibrary.org/obo/MONDO_0021113
T9 514-518 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T10 537-570 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T11 572-576 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T12 615-619 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T13 733-737 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T14 768-792 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T15 794-802 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T16 813-817 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T17 1194-1202 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T18 1287-1291 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T19 1362-1370 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T20 1411-1415 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T21 1422-1431 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T22 1473-1481 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T23 1521-1529 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T5 59-61 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T6 148-149 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T7 155-161 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T8 236-237 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 369-373 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T10 432-438 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T11 495-500 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T12 579-585 http://purl.obolibrary.org/obo/CLO_0001302 denotes 3 , 4
T13 632-638 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T14 686-698 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T15 727-732 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T16 974-975 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T17 976-978 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T18 1108-1109 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T19 1169-1171 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T20 1203-1204 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T16 0-178 Sentence denotes On December 29, 2019, health authorities in China reported 27 cases of an unusual pneumonia, respiratory failure, and death linked to attendance at a live animal market in Wuhan.
T17 179-291 Sentence denotes 1 , 2 On January 7, 2020, Chinese scientists confirmed a novel coronavirus, 2019‐nCoV, as the causative agent.
T18 292-578 Sentence denotes 3 Studies revealed >80% genetic homology of 2019‐nCoV with coronaviruses of bats, presumably the original host; pangolins, suggesting this animal sold at the market as an intermediate host; and another human coronavirus, SARS‐CoV, the cause of severe acute respiratory syndrome (SARS).
T19 579-665 Sentence denotes 3 , 4 All evidence indicates that SARS‐CoV‐2 is of animal and not laboratory origin.
T20 666-804 Sentence denotes 5 The World Health Organization (WHO) later named the novel virus SARS‐CoV‐2 and the related disease coronavirus disease 2019 (COVID‐19).
T21 805-897 Sentence denotes 2 , 3 SARS‐CoV‐2 spread quickly through communities in China and other countries (Fig. 1).
T22 898-1052 Sentence denotes On January 20, 2020, the first case was recognized in the United State when a 35‐year‐old man presented to an urgent care clinic in Snohomish, Washington.
T23 1053-1159 Sentence denotes 6 , 7 On January 30, 2020, WHO declared the outbreak a Public Health Emergency of International Concern.
T24 1160-1214 Sentence denotes On March 11, 2020, WHO designated COVID‐19 a pandemic.
T25 1215-1371 Sentence denotes Almost all countries are implementing public health measures to prevent SARS‐CoV‐2 transmission and are marshaling clinical care for patients with COVID‐19.
T26 1372-1539 Sentence denotes This review highlights key features of SARS‐CoV‐2 infection, the epidemiology and clinical course of COVID‐19, and interventions to stop the growing COVID‐19 pandemic.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 82-91 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T2 93-112 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878