PMC:7242012 / 485-2024
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 32 | 238-255 | Species | denotes | novel coronavirus | Tax:2697049 |
| 33 | 257-266 | Species | denotes | 2019‐nCoV | Tax:2697049 |
| 34 | 337-346 | Species | denotes | 2019‐nCoV | Tax:2697049 |
| 35 | 352-365 | Species | denotes | coronaviruses | Tax:11118 |
| 36 | 495-518 | Species | denotes | human coronavirus, SARS | Tax:694009 |
| 37 | 519-522 | Species | denotes | CoV | Tax:11118 |
| 38 | 615-625 | Species | denotes | SARS‐CoV‐2 | Tax:2697049 |
| 39 | 733-743 | Species | denotes | SARS‐CoV‐2 | Tax:2697049 |
| 40 | 813-823 | Species | denotes | SARS‐CoV‐2 | Tax:2697049 |
| 41 | 1287-1297 | Species | denotes | SARS‐CoV‐2 | Tax:2697049 |
| 42 | 1348-1356 | Species | denotes | patients | Tax:9606 |
| 43 | 82-91 | Disease | denotes | pneumonia | MESH:D011014 |
| 44 | 93-112 | Disease | denotes | respiratory failure | MESH:D012131 |
| 45 | 118-123 | Disease | denotes | death | MESH:D003643 |
| 46 | 544-570 | Disease | denotes | acute respiratory syndrome | MESH:D012120 |
| 47 | 768-792 | Disease | denotes | coronavirus disease 2019 | MESH:C000657245 |
| 48 | 794-802 | Disease | denotes | COVID‐19 | MESH:C000657245 |
| 49 | 1194-1202 | Disease | denotes | COVID‐19 | MESH:C000657245 |
| 50 | 1362-1370 | Disease | denotes | COVID‐19 | MESH:C000657245 |
| 51 | 1411-1431 | Disease | denotes | SARS‐CoV‐2 infection | MESH:C000657245 |
| 52 | 1473-1481 | Disease | denotes | COVID‐19 | MESH:C000657245 |
| 53 | 1521-1529 | Disease | denotes | COVID‐19 | MESH:C000657245 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T7 | 82-91 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T8 | 93-112 | Disease | denotes | respiratory failure | http://purl.obolibrary.org/obo/MONDO_0021113 |
| T9 | 514-518 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T10 | 537-570 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T11 | 572-576 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T12 | 615-619 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T13 | 733-737 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T14 | 768-792 | Disease | denotes | coronavirus disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T15 | 794-802 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T16 | 813-817 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T17 | 1194-1202 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T18 | 1287-1291 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T19 | 1362-1370 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T20 | 1411-1415 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T21 | 1422-1431 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T22 | 1473-1481 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T23 | 1521-1529 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 59-61 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T6 | 148-149 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T7 | 155-161 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
| T8 | 236-237 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T9 | 369-373 | http://purl.obolibrary.org/obo/NCBITaxon_9397 | denotes | bats |
| T10 | 432-438 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
| T11 | 495-500 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T12 | 579-585 | http://purl.obolibrary.org/obo/CLO_0001302 | denotes | 3 , 4 |
| T13 | 632-638 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
| T14 | 686-698 | http://purl.obolibrary.org/obo/OBI_0000245 | denotes | Organization |
| T15 | 727-732 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T16 | 974-975 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T17 | 976-978 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 35 |
| T18 | 1108-1109 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T19 | 1169-1171 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T20 | 1203-1204 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16 | 0-178 | Sentence | denotes | On December 29, 2019, health authorities in China reported 27 cases of an unusual pneumonia, respiratory failure, and death linked to attendance at a live animal market in Wuhan. |
| T17 | 179-291 | Sentence | denotes | 1 , 2 On January 7, 2020, Chinese scientists confirmed a novel coronavirus, 2019‐nCoV, as the causative agent. |
| T18 | 292-578 | Sentence | denotes | 3 Studies revealed >80% genetic homology of 2019‐nCoV with coronaviruses of bats, presumably the original host; pangolins, suggesting this animal sold at the market as an intermediate host; and another human coronavirus, SARS‐CoV, the cause of severe acute respiratory syndrome (SARS). |
| T19 | 579-665 | Sentence | denotes | 3 , 4 All evidence indicates that SARS‐CoV‐2 is of animal and not laboratory origin. |
| T20 | 666-804 | Sentence | denotes | 5 The World Health Organization (WHO) later named the novel virus SARS‐CoV‐2 and the related disease coronavirus disease 2019 (COVID‐19). |
| T21 | 805-897 | Sentence | denotes | 2 , 3 SARS‐CoV‐2 spread quickly through communities in China and other countries (Fig. 1). |
| T22 | 898-1052 | Sentence | denotes | On January 20, 2020, the first case was recognized in the United State when a 35‐year‐old man presented to an urgent care clinic in Snohomish, Washington. |
| T23 | 1053-1159 | Sentence | denotes | 6 , 7 On January 30, 2020, WHO declared the outbreak a Public Health Emergency of International Concern. |
| T24 | 1160-1214 | Sentence | denotes | On March 11, 2020, WHO designated COVID‐19 a pandemic. |
| T25 | 1215-1371 | Sentence | denotes | Almost all countries are implementing public health measures to prevent SARS‐CoV‐2 transmission and are marshaling clinical care for patients with COVID‐19. |
| T26 | 1372-1539 | Sentence | denotes | This review highlights key features of SARS‐CoV‐2 infection, the epidemiology and clinical course of COVID‐19, and interventions to stop the growing COVID‐19 pandemic. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 82-91 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T2 | 93-112 | Phenotype | denotes | respiratory failure | http://purl.obolibrary.org/obo/HP_0002878 |