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PMC:7239011 / 1635-3363 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
27 1401-1413 Gene denotes hyposmia5–14
28 39-49 Species denotes Zika virus Tax:64320
29 1639-1648 Chemical denotes Lopinavir MESH:D061466
30 62-72 Disease denotes COVID SARS MESH:C000657245
31 444-448 Disease denotes pain MESH:D010146
32 461-498 Disease denotes weakness of limbsLess commonAreflexic MESH:D018908
33 692-696 Disease denotes rash MESH:D005076
34 698-705 Disease denotes myalgia MESH:D063806
35 734-742 Disease denotes weakness MESH:D018908
36 757-843 Disease denotes facial weaknessLess commonAreflexic quadri/paraparesisCommonLess commonLess commonLess MESH:D005148
37 1008-1016 Disease denotes headache MESH:D006261
38 1018-1022 Disease denotes rash MESH:D005076
39 1024-1034 Disease denotes arthralgia MESH:D018771
40 1036-1044 Disease denotes diarrhea MESH:D003967
41 1100-1113 Disease denotes limb weakness MESH:D018908
42 1115-1175 Disease denotes facial weaknessMore commonAreflexic quadri/paraparesisCommon MESH:D005148
43 1376-1381 Disease denotes cough MESH:D003371
44 1383-1390 Disease denotes dyspnea MESH:D004417
45 1392-1399 Disease denotes ageusia MESH:D000370
46 1437-1450 Disease denotes limb weakness MESH:D018908
47 1452-1527 Disease denotes facial weaknessLess commonAreflexic quadri/paraparesisCommonLess commonLess MESH:D005148
48 1561-1574 Disease denotes AIDPPneumonia
49 1589-1611 Disease denotes pneumonitisEnhancement
50 1694-1702 Disease denotes weakness MESH:D018908
51 1704-1713 Disease denotes dysphagia MESH:D003680

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T7 237-251 Body_part denotes cranial nerves http://purl.org/sig/ont/fma/fma63820
T8 314-319 Body_part denotes Brain http://purl.org/sig/ont/fma/fma50801
T9 1094-1104 Body_part denotes lower limb http://purl.org/sig/ont/fma/fma7184
T10 1233-1246 Body_part denotes cranial nerve http://purl.org/sig/ont/fma/fma5865
T11 1431-1441 Body_part denotes lower limb http://purl.org/sig/ont/fma/fma7184
T12 1622-1627 Body_part denotes nerve http://purl.org/sig/ont/fma/fma65132

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T4 237-251 Body_part denotes cranial nerves http://purl.obolibrary.org/obo/UBERON_0001785
T5 314-319 Body_part denotes Brain http://purl.obolibrary.org/obo/UBERON_0000955
T6 1100-1104 Body_part denotes limb http://purl.obolibrary.org/obo/UBERON_0002101
T7 1233-1246 Body_part denotes cranial nerve http://purl.obolibrary.org/obo/UBERON_0001785
T8 1241-1246 Body_part denotes nerve http://purl.obolibrary.org/obo/UBERON_0001021
T9 1437-1441 Body_part denotes limb http://purl.obolibrary.org/obo/UBERON_0002101
T10 1622-1627 Body_part denotes nerve http://purl.obolibrary.org/obo/UBERON_0001021

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T11 444-448 Phenotype denotes pain http://purl.obolibrary.org/obo/HP_0012531
T12 692-696 Phenotype denotes rash http://purl.obolibrary.org/obo/HP_0000988
T13 698-705 Phenotype denotes myalgia http://purl.obolibrary.org/obo/HP_0003326
T14 744-755 Phenotype denotes paresthesia http://purl.obolibrary.org/obo/HP_0003401
T15 1008-1016 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T16 1018-1022 Phenotype denotes rash http://purl.obolibrary.org/obo/HP_0000988
T17 1024-1034 Phenotype denotes arthralgia http://purl.obolibrary.org/obo/HP_0002829
T18 1036-1044 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T19 1081-1092 Phenotype denotes paresthesia http://purl.obolibrary.org/obo/HP_0003401
T20 1094-1113 Phenotype denotes lower limb weakness http://purl.obolibrary.org/obo/HP_0007340
T21 1376-1381 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T22 1383-1390 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T23 1392-1399 Phenotype denotes ageusia http://purl.obolibrary.org/obo/HP_0041051
T24 1431-1450 Phenotype denotes lower limb weakness http://purl.obolibrary.org/obo/HP_0007340
T25 1704-1713 Phenotype denotes dysphagia http://purl.obolibrary.org/obo/HP_0002015

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T37 16-19 Disease denotes GBS http://purl.obolibrary.org/obo/MONDO_0016218
T38 20-26 Disease denotes Dengue http://purl.obolibrary.org/obo/MONDO_0005502
T39 35-38 Disease denotes GBS http://purl.obolibrary.org/obo/MONDO_0016218
T40 39-43 Disease denotes Zika http://purl.obolibrary.org/obo/MONDO_0018661
T41 58-61 Disease denotes GBS http://purl.obolibrary.org/obo/MONDO_0016218
T42 68-72 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T43 81-84 Disease denotes GBS http://purl.obolibrary.org/obo/MONDO_0016218
T44 890-895 Disease denotes AMSAN http://purl.obolibrary.org/obo/MONDO_0020348
T45 1036-1044 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T46 1248-1252 Disease denotes AIDP http://purl.obolibrary.org/obo/MONDO_0020347
T47 1255-1259 Disease denotes AMAN http://purl.obolibrary.org/obo/MONDO_0020349
T48 1261-1266 Disease denotes AMSAN http://purl.obolibrary.org/obo/MONDO_0020348
T49 1548-1553 Disease denotes AMSAN http://purl.obolibrary.org/obo/MONDO_0020348
T50 1555-1559 Disease denotes AMAN http://purl.obolibrary.org/obo/MONDO_0020349

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T9 44-49 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T10 245-251 http://purl.obolibrary.org/obo/UBERON_0001021 denotes nerves
T11 314-319 http://purl.obolibrary.org/obo/UBERON_0000955 denotes Brain
T12 314-319 http://www.ebi.ac.uk/efo/EFO_0000302 denotes Brain
T13 1100-1104 http://www.ebi.ac.uk/efo/EFO_0000876 denotes limb
T14 1241-1246 http://purl.obolibrary.org/obo/UBERON_0001021 denotes nerve
T15 1437-1441 http://www.ebi.ac.uk/efo/EFO_0000876 denotes limb
T16 1622-1627 http://purl.obolibrary.org/obo/UBERON_0001021 denotes nerve

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T6 1639-1648 Chemical denotes Lopinavir http://purl.obolibrary.org/obo/CHEBI_31781
T7 1650-1659 Chemical denotes ritonavir http://purl.obolibrary.org/obo/CHEBI_45409

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T17 0-84 Sentence denotes Feature Typical GBS Dengue-related GBS Zika virus-related GBS COVID SARS related GBS
T18 85-1728 Sentence denotes Geographical distributionAgeSexPreceding illnessMean time to GBSInitial symptomsDysphagiaSignsFacial diplegiaDysautonomiaAtaxiaRespiratory failureOther cranial nerves involvedLeukopeniaThrombocytopeniaNerve conductionCT chestMRI Brain/spineTreatmentOutcome GlobalAll age groupsMales 1.5 times more affectedRespiratory or gastrointestinal< 6 weeksParesthesia, pain followed by weakness of limbsLess commonAreflexic quadreparesisCommonCommonLess common25%Ocular nervesUncommonUncommonAIDP--IVIG, PlasmapherisisGood, persistent disability in 20%-30% Latin America, IndiaAll age groupsMales:Females EqualFever, rash, myalgia, headache1–30 daysAscending weakness, paresthesia, facial weaknessLess commonAreflexic quadri/paraparesisCommonLess commonLess commonLess commonGlossopharyngeal nerveCommonCommonAIDP, AMSAN--IVIG, PlasmapheresisGood Latin America, Europe, East Asia, North AmericalMiddle age to elderlyMore malesFever, headache, rash, arthralgia, diarrhea, conjunctivitis0–10 daysLimb pains, paresthesia, lower limb weakness, facial weaknessMore commonAreflexic quadri/paraparesisCommon (>50%)Common (up to 30%)Common (up to 70%)Less common3rd cranial nerve--AIDP > AMAN, AMSAN--IVIG, PlasmapheresisGood, half may require ICU care China, Iran, Europe, USAUsually elderlyMore malesFever, cough, dyspnea, ageusia, hyposmia5–14 daysParesthesia, lower limb weakness, facial weaknessLess commonAreflexic quadri/paraparesisCommonLess commonLess commonCommon-Common-AMSAN, AMAN, AIDPPneumonia, interstitial pneumonitisEnhancement of caudal nerve rootsIVIG, Lopinavir, ritonavir, HCQ, Azithromycin,Poor, residual weakness, dysphagia, long ICU stay