PMC:7234792 / 9392-9722
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 184 | 199-206 | Species | denotes | patient | Tax:9606 |
| 185 | 322-329 | Species | denotes | patient | Tax:9606 |
| 188 | 68-76 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 189 | 110-121 | Disease | denotes | lung injury | MESH:D055370 |
| 190 | 133-148 | Disease | denotes | alveolar damage | MESH:D055370 |
| 191 | 212-220 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T68 | 110-114 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T69 | 133-141 | Body_part | denotes | alveolar | http://purl.org/sig/ont/fma/fma264783 |
| T70 | 263-275 | Body_part | denotes | plasma cells | http://purl.org/sig/ont/fma/fma70574 |
| T71 | 263-269 | Body_part | denotes | plasma | http://purl.org/sig/ont/fma/fma62970 |
| T72 | 270-275 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T42 | 110-114 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T48 | 68-76 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T49 | 104-121 | Disease | denotes | acute lung injury | http://purl.obolibrary.org/obo/MONDO_0006502|http://purl.obolibrary.org/obo/MONDO_0015796 |
| T51 | 115-121 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
| T52 | 212-220 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T120 | 8-12 | http://purl.obolibrary.org/obo/CLO_0008416 | denotes | peer |
| T121 | 8-12 | http://purl.obolibrary.org/obo/CLO_0050081 | denotes | peer |
| T122 | 110-114 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T123 | 110-114 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T124 | 153-155 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T125 | 197-198 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T126 | 231-232 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T127 | 263-275 | http://purl.obolibrary.org/obo/CL_0000786 | denotes | plasma cells |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T84 | 190-193 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T32 | 104-121 | Phenotype | denotes | acute lung injury | http://www.orpha.net/ORDO/Orphanet_178320 |
| T33 | 125-148 | Phenotype | denotes | diffuse alveolar damage | http://purl.obolibrary.org/obo/HP_0033006 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T63 | 0-330 | Sentence | denotes | The few peer-reviewed publications reporting pulmonary pathology in COVID-19 to date have all described acute lung injury or diffuse alveolar damage.10, 11, 12, 13, 14, 15, 16 One report of BAL in a patient with COVID-19 described a large number of aggregates of plasma cells;17 this was not seen in the specimen from our patient. |