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PMC:7234792 / 7913-8835 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
163 5-12 Species denotes patient Tax:9606
164 213-223 Species denotes SARS-CoV-2 Tax:2697049
165 546-554 Species denotes patients Tax:9606
166 694-701 Species denotes patient Tax:9606
167 909-921 Chemical denotes azithromycin MESH:D017963
168 132-140 Disease denotes COVID-19 MESH:C000657245
169 463-491 Disease denotes multifocal pulmonary disease MESH:D008171
170 560-568 Disease denotes COVID-19 MESH:C000657245
171 787-796 Disease denotes infection MESH:D007239

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T61 323-331 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T62 510-518 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T38 132-140 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T39 213-221 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T40 474-491 Disease denotes pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005275
T41 560-568 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T42 777-796 Disease denotes influenza infection http://purl.obolibrary.org/obo/MONDO_0005812
T43 787-796 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T104 70-74 http://purl.obolibrary.org/obo/CLO_0001550 denotes a 10
T105 117-118 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T106 307-308 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T107 508-509 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T108 525-528 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T109 596-597 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T110 821-823 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T79 909-921 Chemical denotes azithromycin http://purl.obolibrary.org/obo/CHEBI_2955

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T28 323-337 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T29 342-362 Phenotype denotes pulmonary infiltrate http://purl.obolibrary.org/obo/HP_0002113
T30 510-524 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T56 0-184 Sentence denotes This patient experienced an unusual, confusing clinical course during a 10-day hospitalisation, which concluded with a diagnosis of COVID-19, confirmed only with bronchoscopic samples.
T57 185-492 Sentence denotes An atypical presentation of SARS-CoV-2 can explain the entire clinical course during this hospitalisation, beginning with a possible mild cytokine storm and pulmonary infiltrate on hospital day 1, with initial clinical improvement followed by rapid progression within 4 days to multifocal pulmonary disease.
T58 493-689 Sentence denotes Development of a cytokine storm has been reported in patients with COVID-19, but its occurrence within a few hours after onset of symptoms seems unusual,9 as does the initial clinical improvement.
T59 690-922 Sentence denotes The patient's clinical course might have been affected by other factors, including the influenza infection itself or its treatment 11 days earlier, chronic antiretroviral therapy, and early initiation of treatment with azithromycin.