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PMC:7234792 / 3079-3797 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
35 281-319 Disease denotes new right upper lobe nodular opacities MESH:D003318

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T15 22-27 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T16 40-45 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T17 80-85 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T18 129-133 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T19 160-165 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T20 182-198 Body_part denotes right lower lobe http://purl.org/sig/ont/fma/fma7337
T21 257-262 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T22 285-301 Body_part denotes right upper lobe http://purl.org/sig/ont/fma/fma7333
T23 373-389 Body_part denotes right lower lobe http://purl.org/sig/ont/fma/fma7337
T24 425-441 Body_part denotes right lower lobe http://purl.org/sig/ont/fma/fma7337
T25 517-532 Body_part denotes left lower lobe http://purl.org/sig/ont/fma/fma7371
T26 591-607 Body_part denotes right lower lobe http://purl.org/sig/ont/fma/fma7337
T27 666-670 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T8 22-27 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T9 40-45 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T10 80-85 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T11 129-133 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T12 160-165 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T13 194-198 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T14 257-262 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T15 297-301 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T16 385-389 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T17 437-441 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T18 528-532 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T19 603-607 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T20 666-670 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T47 22-27 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T48 40-45 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T49 67-68 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T50 80-85 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T51 129-133 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T52 129-133 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T53 151-152 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T54 160-165 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T55 248-249 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T56 257-262 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T57 333-334 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T58 511-512 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T59 666-670 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T60 666-670 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T9 472-489 Phenotype denotes reverse halo sign http://purl.obolibrary.org/obo/HP_0032983

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T21 0-65 Sentence denotes Figure 1 Imaging with chest radiograph, chest CT, and radial EBUS
T22 66-247 Sentence denotes (A) Admission chest radiograph (hospital day 1) with right mid-lung nodule (arrow). (B) First chest CT (day 2) with right lower lobe rounded opacity with possible halo sign (arrow).
T23 248-687 Sentence denotes A second chest CT (day 6) showed new right upper lobe nodular opacities (C; arrows), a new large ground glass opacity in the right lower lobe (D; arrow); and enlargement of the right lower lobe rounded opacity with possible reverse halo sign (E; green arrow) and a new left lower lobe rounded opacity (E; blue arrow). (F) Radial EBUS image of right lower lobe rounded opacity (arrow) used to target the transbronchial lung biopsy on day 9.
T24 688-718 Sentence denotes EBUS=endobronchial ultrasound.