PMC:7228307 / 58420-58930
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1197 | 93-100 | Gene | denotes | FcγRIIb | Gene:2213 |
1198 | 225-232 | Gene | denotes | FcγRIIb | Gene:2213 |
1199 | 12-16 | Gene | denotes | FcγR | Gene:2213 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T978 | 12-14 | http://purl.obolibrary.org/obo/CLO_0052676 | denotes | Fc |
T979 | 81-82 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T980 | 93-95 | http://purl.obolibrary.org/obo/CLO_0052676 | denotes | Fc |
T981 | 225-227 | http://purl.obolibrary.org/obo/CLO_0052676 | denotes | Fc |
T982 | 338-346 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T80667 | 270-277 | Chemical | denotes | epitope | http://purl.obolibrary.org/obo/CHEBI_53000 |
T94340 | 417-424 | Chemical | denotes | epitope | http://purl.obolibrary.org/obo/CHEBI_53000 |
T17986 | 481-491 | Chemical | denotes | antagonist | http://purl.obolibrary.org/obo/CHEBI_48706 |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T165 | 0-3 | DT | denotes | The |
T166 | 4-8 | NN | denotes | role |
T167 | 9-11 | IN | denotes | of |
T168 | 12-16 | NN | denotes | FcγR |
T169 | 17-19 | IN | denotes | in |
T170 | 20-23 | DT | denotes | the |
T171 | 24-30 | NN | denotes | action |
T172 | 31-33 | IN | denotes | of |
T173 | 34-39 | DT | denotes | these |
T174 | 40-45 | NNS | denotes | types |
T175 | 46-48 | IN | denotes | of |
T176 | 49-53 | NNS | denotes | mAbs |
T177 | 54-61 | VBZ | denotes | appears |
T178 | 62-64 | TO | denotes | to |
T179 | 65-67 | VB | denotes | be |
T180 | 68-77 | RB | denotes | primarily |
T181 | 78-80 | IN | denotes | as |
T182 | 81-82 | DT | denotes | a |
T183 | 83-91 | NN | denotes | scaffold |
T184 | 93-100 | NN | denotes | FcγRIIb |
T185 | 101-103 | VBZ | denotes | is |
T186 | 104-109 | RB | denotes | often |
T187 | 110-113 | DT | denotes | the |
T188 | 114-125 | JJ | denotes | predominate |
T189 | 126-134 | NN | denotes | receptor |
T190 | 135-143 | VBN | denotes | involved |
T191 | 144-147 | CC | denotes | and |
T192 | 148-151 | DT | denotes | the |
T193 | 152-158 | NN | denotes | extent |
T194 | 159-161 | IN | denotes | of |
T195 | 162-165 | PRP-DOLLAR- | denotes | its |
T196 | 166-177 | NN | denotes | involvement |
T197 | 178-180 | VBZ | denotes | is |
T198 | 181-188 | JJ | denotes | complex |
T199 | 190-192 | IN | denotes | In |
T200 | 193-196 | DT | denotes | the |
T201 | 197-201 | NN | denotes | case |
T202 | 202-204 | IN | denotes | of |
T203 | 205-209 | NN | denotes | CD40 |
T204 | 209-210 | -COMMA- | denotes | , |
T205 | 211-214 | DT | denotes | the |
T206 | 215-221 | NN | denotes | degree |
T207 | 222-224 | IN | denotes | of |
T208 | 225-232 | NN | denotes | FcγRIIb |
T209 | 233-244 | NN | denotes | scaffolding |
T210 | 245-252 | NN | denotes | potency |
T211 | 253-255 | VBZ | denotes | is |
T212 | 256-262 | VBN | denotes | linked |
T213 | 263-265 | TO | denotes | to |
T214 | 266-269 | DT | denotes | the |
T215 | 270-277 | NN | denotes | epitope |
T216 | 278-286 | NN | denotes | location |
T217 | 287-289 | IN | denotes | of |
T218 | 290-293 | DT | denotes | the |
T219 | 294-303 | VBG | denotes | targeting |
T220 | 304-307 | NN | denotes | mAb |
T221 | 308-312 | IN | denotes | with |
T222 | 313-320 | JJR | denotes | greater |
T223 | 321-328 | NN | denotes | potency |
T224 | 329-333 | VBN | denotes | seen |
T225 | 334-337 | IN | denotes | for |
T226 | 338-346 | NN | denotes | membrane |
T227 | 347-355 | JJ | denotes | proximal |
T228 | 356-367 | NN | denotes | epitopes.43 |
T229 | 367-368 | -COMMA- | denotes | , |
T230 | 369-372 | CD | denotes | 117 |
T231 | 373-375 | PRP | denotes | It |
T232 | 376-378 | VBZ | denotes | is |
T233 | 379-383 | RB | denotes | also |
T234 | 384-394 | JJ | denotes | noteworthy |
T235 | 395-399 | IN | denotes | that |
T236 | 400-409 | VBG | denotes | depending |
T237 | 410-412 | IN | denotes | on |
T238 | 413-416 | DT | denotes | the |
T239 | 417-424 | NN | denotes | epitope |
T240 | 425-433 | NN | denotes | location |
T241 | 433-434 | -COMMA- | denotes | , |
T242 | 435-438 | DT | denotes | the |
T243 | 439-450 | NN | denotes | scaffolding |
T244 | 451-453 | IN | denotes | of |
T245 | 454-463 | NN | denotes | anti‐CD40 |
T246 | 464-468 | NNS | denotes | mAbs |
T247 | 469-472 | MD | denotes | may |
T248 | 473-480 | VB | denotes | convert |
T249 | 481-491 | NN | denotes | antagonist |
T250 | 492-496 | NNS | denotes | mAbs |
T251 | 497-499 | TO | denotes | to |
T252 | 500-509 | JJ | denotes | agonistic |
R166 | T166 | T165 | arg1Of | role,The |
R167 | T166 | T167 | arg1Of | role,of |
R168 | T168 | T167 | arg2Of | FcγR,of |
R169 | T166 | T169 | arg1Of | role,in |
R170 | T171 | T169 | arg2Of | action,in |
R171 | T171 | T170 | arg1Of | action,the |
R172 | T171 | T172 | arg1Of | action,of |
R173 | T174 | T172 | arg2Of | types,of |
R174 | T174 | T173 | arg1Of | types,these |
R175 | T174 | T175 | arg1Of | types,of |
R176 | T176 | T175 | arg2Of | mAbs,of |
R177 | T166 | T177 | arg1Of | role,appears |
R178 | T179 | T177 | arg2Of | be,appears |
R179 | T179 | T178 | arg1Of | be,to |
R180 | T166 | T179 | arg1Of | role,be |
R181 | T181 | T179 | arg2Of | as,be |
R182 | T181 | T180 | arg1Of | as,primarily |
R183 | T166 | T181 | arg1Of | role,as |
R184 | T183 | T181 | arg2Of | scaffold,as |
R185 | T183 | T182 | arg1Of | scaffold,a |
R186 | T184 | T185 | arg1Of | FcγRIIb,is |
R187 | T189 | T185 | arg2Of | receptor,is |
R188 | T185 | T186 | arg1Of | is,often |
R189 | T189 | T187 | arg1Of | receptor,the |
R190 | T189 | T188 | arg1Of | receptor,predominate |
R191 | T189 | T190 | arg2Of | receptor,involved |
R192 | T185 | T191 | arg1Of | is,and |
R193 | T197 | T191 | arg2Of | is,and |
R194 | T193 | T192 | arg1Of | extent,the |
R195 | T193 | T194 | arg1Of | extent,of |
R196 | T196 | T194 | arg2Of | involvement,of |
R197 | T196 | T195 | arg1Of | involvement,its |
R198 | T193 | T197 | arg1Of | extent,is |
R199 | T198 | T197 | arg2Of | complex,is |
R200 | T193 | T198 | arg1Of | extent,complex |
R201 | T212 | T199 | arg1Of | linked,In |
R202 | T201 | T199 | arg2Of | case,In |
R203 | T201 | T200 | arg1Of | case,the |
R204 | T201 | T202 | arg1Of | case,of |
R205 | T203 | T202 | arg2Of | CD40,of |
R206 | T212 | T204 | arg1Of | linked,"," |
R207 | T206 | T205 | arg1Of | degree,the |
R208 | T206 | T207 | arg1Of | degree,of |
R209 | T210 | T207 | arg2Of | potency,of |
R210 | T210 | T208 | arg1Of | potency,FcγRIIb |
R211 | T210 | T209 | arg1Of | potency,scaffolding |
R212 | T206 | T211 | arg1Of | degree,is |
R213 | T212 | T211 | arg2Of | linked,is |
R214 | T232 | T211 | modOf | is,is |
R215 | T206 | T212 | arg2Of | degree,linked |
R216 | T212 | T213 | arg1Of | linked,to |
R217 | T216 | T213 | arg2Of | location,to |
R218 | T216 | T214 | arg1Of | location,the |
R219 | T216 | T215 | arg1Of | location,epitope |
R220 | T216 | T217 | arg1Of | location,of |
R221 | T219 | T217 | arg2Of | targeting,of |
R222 | T219 | T218 | arg1Of | targeting,the |
R223 | T218 | T219 | arg1Of | the,targeting |
R224 | T220 | T219 | arg2Of | mAb,targeting |
R225 | T219 | T221 | arg1Of | targeting,with |
R226 | T223 | T221 | arg2Of | potency,with |
R227 | T223 | T222 | arg1Of | potency,greater |
R228 | T223 | T224 | arg2Of | potency,seen |
R229 | T224 | T225 | arg1Of | seen,for |
R230 | T228 | T225 | arg2Of | epitopes.43,for |
R231 | T228 | T226 | arg1Of | epitopes.43,membrane |
R232 | T228 | T227 | arg1Of | epitopes.43,proximal |
R233 | T216 | T229 | arg1Of | location,"," |
R234 | T230 | T229 | arg2Of | 117,"," |
R235 | T248 | T231 | arg1Of | convert,It |
R236 | T248 | T232 | arg1Of | convert,is |
R237 | T234 | T232 | arg2Of | noteworthy,is |
R238 | T232 | T233 | arg1Of | is,also |
R239 | T248 | T234 | arg1Of | convert,noteworthy |
R240 | T248 | T235 | arg1Of | convert,that |
R241 | T248 | T236 | arg1Of | convert,depending |
R242 | T237 | T236 | arg2Of | on,depending |
R243 | T240 | T237 | arg2Of | location,on |
R244 | T240 | T238 | arg1Of | location,the |
R245 | T240 | T239 | arg1Of | location,epitope |
R246 | T248 | T241 | arg1Of | convert,"," |
R247 | T243 | T242 | arg1Of | scaffolding,the |
R248 | T243 | T244 | arg1Of | scaffolding,of |
R249 | T246 | T244 | arg2Of | mAbs,of |
R250 | T246 | T245 | arg1Of | mAbs,anti‐CD40 |
R251 | T243 | T247 | arg1Of | scaffolding,may |
R252 | T248 | T247 | arg2Of | convert,may |
R253 | T243 | T248 | arg1Of | scaffolding,convert |
R254 | T250 | T248 | arg2Of | mAbs,convert |
R255 | T250 | T249 | arg1Of | mAbs,antagonist |
R256 | T248 | T251 | arg1Of | convert,to |
R257 | T252 | T251 | arg2Of | agonistic,to |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
1197 | 93-100 | Gene | denotes | FcγRIIb | Gene:2213 |
1198 | 225-232 | Gene | denotes | FcγRIIb | Gene:2213 |
1199 | 12-16 | Gene | denotes | FcγR | Gene:2213 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T324 | 0-92 | Sentence | denotes | The role of FcγR in the action of these types of mAbs appears to be primarily as a scaffold. |
T325 | 93-189 | Sentence | denotes | FcγRIIb is often the predominate receptor involved and the extent of its involvement is complex. |
T326 | 190-510 | Sentence | denotes | In the case of CD40, the degree of FcγRIIb scaffolding potency is linked to the epitope location of the targeting mAb with greater potency seen for membrane proximal epitopes.43, 117 It is also noteworthy that depending on the epitope location, the scaffolding of anti‐CD40 mAbs may convert antagonist mAbs to agonistic. |
LitCovid-sample-UniProt
Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
---|---|---|---|---|---|
T773 | 205-209 | Protein | denotes | CD40 | https://www.uniprot.org/uniprot/Q9BYU0|https://www.uniprot.org/uniprot/Q99NE3|https://www.uniprot.org/uniprot/Q99NE2|https://www.uniprot.org/uniprot/Q99NE1|https://www.uniprot.org/uniprot/Q99NE0|https://www.uniprot.org/uniprot/Q8SQ34|https://www.uniprot.org/uniprot/Q8K2X6|https://www.uniprot.org/uniprot/Q86YK5|https://www.uniprot.org/uniprot/Q7YRL5|https://www.uniprot.org/uniprot/Q7M4Q8|https://www.uniprot.org/uniprot/Q5U007|https://www.uniprot.org/uniprot/Q5JY15|https://www.uniprot.org/uniprot/Q542B1|https://www.uniprot.org/uniprot/Q53GN5|https://www.uniprot.org/uniprot/Q3ZTK5|https://www.uniprot.org/uniprot/Q3UBH3|https://www.uniprot.org/uniprot/Q3U7C9|https://www.uniprot.org/uniprot/Q3U799|https://www.uniprot.org/uniprot/Q3TSL2|https://www.uniprot.org/uniprot/Q3TS33|https://www.uniprot.org/uniprot/Q3LRP1|https://www.uniprot.org/uniprot/Q28203|https://www.uniprot.org/uniprot/P27512|https://www.uniprot.org/uniprot/P25942|https://www.uniprot.org/uniprot/E1P5S9|https://www.uniprot.org/uniprot/A7YWS9 |
T799 | 459-463 | Protein | denotes | CD40 | https://www.uniprot.org/uniprot/Q9BYU0|https://www.uniprot.org/uniprot/Q99NE3|https://www.uniprot.org/uniprot/Q99NE2|https://www.uniprot.org/uniprot/Q99NE1|https://www.uniprot.org/uniprot/Q99NE0|https://www.uniprot.org/uniprot/Q8SQ34|https://www.uniprot.org/uniprot/Q8K2X6|https://www.uniprot.org/uniprot/Q86YK5|https://www.uniprot.org/uniprot/Q7YRL5|https://www.uniprot.org/uniprot/Q7M4Q8|https://www.uniprot.org/uniprot/Q5U007|https://www.uniprot.org/uniprot/Q5JY15|https://www.uniprot.org/uniprot/Q542B1|https://www.uniprot.org/uniprot/Q53GN5|https://www.uniprot.org/uniprot/Q3ZTK5|https://www.uniprot.org/uniprot/Q3UBH3|https://www.uniprot.org/uniprot/Q3U7C9|https://www.uniprot.org/uniprot/Q3U799|https://www.uniprot.org/uniprot/Q3TSL2|https://www.uniprot.org/uniprot/Q3TS33|https://www.uniprot.org/uniprot/Q3LRP1|https://www.uniprot.org/uniprot/Q28203|https://www.uniprot.org/uniprot/P27512|https://www.uniprot.org/uniprot/P25942|https://www.uniprot.org/uniprot/E1P5S9|https://www.uniprot.org/uniprot/A7YWS9 |
LitCovid-sample-PD-MAT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25 | 347-355 | http://purl.obolibrary.org/obo/MAT_0000491 | denotes | proximal |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T324 | 0-92 | Sentence | denotes | The role of FcγR in the action of these types of mAbs appears to be primarily as a scaffold. |
T325 | 93-189 | Sentence | denotes | FcγRIIb is often the predominate receptor involved and the extent of its involvement is complex. |
T326 | 190-510 | Sentence | denotes | In the case of CD40, the degree of FcγRIIb scaffolding potency is linked to the epitope location of the targeting mAb with greater potency seen for membrane proximal epitopes.43, 117 It is also noteworthy that depending on the epitope location, the scaffolding of anti‐CD40 mAbs may convert antagonist mAbs to agonistic. |