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PMC:7228307 / 58074-58419 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1188 250-254 Gene denotes OX40 Gene:7293
1189 327-330 Gene denotes DR4 Gene:3126
1190 332-335 Gene denotes DR5 Gene:8795
1191 243-248 Gene denotes 4‐1BB Gene:3604
1192 289-294 Disease denotes death MESH:D003643
1193 308-314 Disease denotes cancer MESH:D009369

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T448 42-47 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T449 195-219 Body_part denotes antigen‐presenting cells http://purl.org/sig/ont/fma/fma273565
T450 214-219 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T451 225-230 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T452 315-320 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T111 308-314 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T972 42-47 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T973 63-72 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T974 214-219 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T975 223-230 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T976 315-320 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T977 342-345 http://purl.obolibrary.org/obo/CLO_0001046 denotes 116

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T38447 182-191 Chemical denotes molecules http://purl.obolibrary.org/obo/CHEBI_25367
T65735 195-202 Chemical denotes antigen http://purl.obolibrary.org/obo/CHEBI_59132

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T247 42-47 http://purl.obolibrary.org/obo/CL_0000000 denotes cells
T248 214-219 http://purl.obolibrary.org/obo/CL_0000000 denotes cells
T249 225-230 http://purl.obolibrary.org/obo/CL_0000000 denotes cells
T250 315-320 http://purl.obolibrary.org/obo/CL_0000000 denotes cells

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T106 0-9 JJ denotes Agonistic
T107 10-14 NNS denotes mAbs
T108 15-21 VBP denotes induce
T109 22-31 NNS denotes responses
T110 32-34 IN denotes in
T111 35-41 NN denotes target
T112 42-47 NNS denotes cells
T113 48-50 IN denotes by
T114 51-62 VBG denotes stimulating
T115 63-72 NN denotes signaling
T116 73-75 IN denotes of
T117 76-81 PRP-DOLLAR- denotes their
T118 82-91 JJ denotes molecular
T119 92-98 NN denotes target
T120 100-109 RB denotes Typically
T121 109-110 -COMMA- denotes ,
T122 111-115 DT denotes this
T123 116-118 VBZ denotes is
T124 119-121 TO denotes to
T125 122-128 CC denotes either
T126 129-136 VB denotes enhance
T127 137-146 NN denotes antitumor
T128 147-155 NN denotes immunity
T129 156-158 IN denotes by
T130 159-167 VBG denotes engaging
T131 168-181 JJ denotes costimulatory
T132 182-191 NNS denotes molecules
T133 192-194 IN denotes on
T134 195-213 JJ denotes antigen‐presenting
T135 214-219 NNS denotes cells
T136 220-222 CC denotes or
T137 223-224 NN denotes T
T138 225-230 NNS denotes cells
T139 231-232 -LRB- denotes (
T140 232-236 FW denotes i.e.
T141 237-241 NN denotes CD40
T142 241-242 -COMMA- denotes ,
T143 243-248 NN denotes 4‐1BB
T144 248-249 -COMMA- denotes ,
T145 250-254 NN denotes OX40
T146 254-255 -RRB- denotes )
T147 256-258 CC denotes or
T148 259-266 VB denotes promote
T149 267-276 NN denotes apoptosis
T150 277-279 IN denotes by
T151 280-288 VBG denotes engaging
T152 289-294 NN denotes death
T153 295-304 NNS denotes receptors
T154 305-307 IN denotes on
T155 308-314 NN denotes cancer
T156 315-320 NNS denotes cells
T157 321-322 -LRB- denotes (
T158 322-326 FW denotes i.e.
T159 327-330 NN denotes DR4
T160 330-331 -COMMA- denotes ,
T161 332-335 NN denotes DR5
T162 335-336 -COMMA- denotes ,
T163 337-340 NN denotes Fas
T164 340-341 -RRB- denotes )
R108 T107 T106 arg1Of mAbs,Agonistic
R109 T107 T108 arg1Of mAbs,induce
R110 T109 T108 arg2Of responses,induce
R111 T109 T110 arg1Of responses,in
R112 T112 T110 arg2Of cells,in
R113 T112 T111 arg1Of cells,target
R114 T108 T113 arg1Of induce,by
R115 T114 T113 arg2Of stimulating,by
R116 T107 T114 arg1Of mAbs,stimulating
R117 T115 T114 arg2Of signaling,stimulating
R118 T115 T116 arg1Of signaling,of
R119 T119 T116 arg2Of target,of
R120 T119 T117 arg1Of target,their
R121 T119 T118 arg1Of target,molecular
R122 T123 T120 arg1Of is,Typically
R123 T123 T121 arg1Of is,","
R124 T122 T123 arg1Of this,is
R125 T147 T123 arg2Of or,is
R126 T147 T124 arg1Of or,to
R127 T147 T125 arg1Of or,either
R128 T128 T126 arg2Of immunity,enhance
R129 T128 T127 arg1Of immunity,antitumor
R130 T126 T129 arg1Of enhance,by
R131 T130 T129 arg2Of engaging,by
R132 T132 T130 arg2Of molecules,engaging
R133 T132 T131 arg1Of molecules,costimulatory
R134 T132 T133 arg1Of molecules,on
R135 T136 T133 arg2Of or,on
R136 T135 T134 arg1Of cells,antigen‐presenting
R137 T135 T136 arg1Of cells,or
R138 T138 T136 arg2Of cells,or
R139 T138 T137 arg1Of cells,T
R140 T136 T139 arg1Of or,(
R141 T142 T139 arg2Of ",",(
R142 T146 T139 arg3Of ),(
R143 T142 T140 arg1Of ",",i.e.
R144 T141 T142 arg1Of CD40,","
R145 T143 T142 arg2Of 4‐1BB,","
R146 T142 T144 arg1Of ",",","
R147 T145 T144 arg2Of OX40,","
R148 T126 T147 arg1Of enhance,or
R149 T148 T147 arg2Of promote,or
R150 T149 T148 arg2Of apoptosis,promote
R151 T148 T150 arg1Of promote,by
R152 T151 T150 arg2Of engaging,by
R153 T153 T151 arg2Of receptors,engaging
R154 T153 T152 arg1Of receptors,death
R155 T153 T154 arg1Of receptors,on
R156 T156 T154 arg2Of cells,on
R157 T156 T155 arg1Of cells,cancer
R158 T156 T157 arg1Of cells,(
R159 T159 T157 arg2Of DR4,(
R160 T164 T157 arg3Of ),(
R161 T159 T158 arg1Of DR4,i.e.
R162 T159 T160 arg1Of DR4,","
R163 T161 T160 arg2Of DR5,","
R164 T159 T162 arg1Of DR4,","
R165 T163 T162 arg2Of Fas,","

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
1188 250-254 Gene denotes OX40 Gene:7293
1189 327-330 Gene denotes DR4 Gene:3126
1190 332-335 Gene denotes DR5 Gene:8795
1191 243-248 Gene denotes 4‐1BB Gene:3604
1192 289-294 Disease denotes death MESH:D003643
1193 308-314 Disease denotes cancer MESH:D009369

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T322 0-99 Sentence denotes Agonistic mAbs induce responses in target cells by stimulating signaling of their molecular target.
T323 100-345 Sentence denotes Typically, this is to either enhance antitumor immunity by engaging costimulatory molecules on antigen‐presenting cells or T cells (i.e. CD40, 4‐1BB, OX40) or promote apoptosis by engaging death receptors on cancer cells (i.e. DR4, DR5, Fas).116

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T738 168-191 Protein denotes costimulatory molecules https://www.uniprot.org/uniprot/Q9BXR1|https://www.uniprot.org/uniprot/Q8VE98|https://www.uniprot.org/uniprot/Q8NCB6|https://www.uniprot.org/uniprot/Q8NC34|https://www.uniprot.org/uniprot/Q8NBI8|https://www.uniprot.org/uniprot/Q7TPB4|https://www.uniprot.org/uniprot/Q6UXI2|https://www.uniprot.org/uniprot/Q6P5Y4|https://www.uniprot.org/uniprot/Q5ZPR3
T747 237-241 Protein denotes CD40 https://www.uniprot.org/uniprot/Q9BYU0|https://www.uniprot.org/uniprot/Q99NE3|https://www.uniprot.org/uniprot/Q99NE2|https://www.uniprot.org/uniprot/Q99NE1|https://www.uniprot.org/uniprot/Q99NE0|https://www.uniprot.org/uniprot/Q8SQ34|https://www.uniprot.org/uniprot/Q8K2X6|https://www.uniprot.org/uniprot/Q86YK5|https://www.uniprot.org/uniprot/Q7YRL5|https://www.uniprot.org/uniprot/Q7M4Q8|https://www.uniprot.org/uniprot/Q5U007|https://www.uniprot.org/uniprot/Q5JY15|https://www.uniprot.org/uniprot/Q542B1|https://www.uniprot.org/uniprot/Q53GN5|https://www.uniprot.org/uniprot/Q3ZTK5|https://www.uniprot.org/uniprot/Q3UBH3|https://www.uniprot.org/uniprot/Q3U7C9|https://www.uniprot.org/uniprot/Q3U799|https://www.uniprot.org/uniprot/Q3TSL2|https://www.uniprot.org/uniprot/Q3TS33|https://www.uniprot.org/uniprot/Q3LRP1|https://www.uniprot.org/uniprot/Q28203|https://www.uniprot.org/uniprot/P27512|https://www.uniprot.org/uniprot/P25942|https://www.uniprot.org/uniprot/E1P5S9|https://www.uniprot.org/uniprot/A7YWS9

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T447 42-47 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T448 195-219 Body_part denotes antigen‐presenting cells http://purl.org/sig/ont/fma/fma273565
T449 214-219 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T450 225-230 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T451 315-320 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T132 63-72 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T133 267-276 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T134 267-276 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T135 289-294 http://purl.obolibrary.org/obo/GO_0016265 denotes death

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T48 308-314 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992

LitCovid-sample-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T43 308-314 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T132 63-72 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T133 267-276 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T134 267-276 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T132 63-72 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T133 267-276 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T134 267-276 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T322 0-99 Sentence denotes Agonistic mAbs induce responses in target cells by stimulating signaling of their molecular target.
T323 100-345 Sentence denotes Typically, this is to either enhance antitumor immunity by engaging costimulatory molecules on antigen‐presenting cells or T cells (i.e. CD40, 4‐1BB, OX40) or promote apoptosis by engaging death receptors on cancer cells (i.e. DR4, DR5, Fas).116

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T43 308-314 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664