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PMC:7228307 / 47632-47912 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id tao:has_standard_notation
914 215-223 Gene denotes FcγRIIIa Gene:2214
915 259-267 Gene denotes FcγRIIIa Gene:2214
918 96-124 Disease denotes chronic lymphocytic leukemia MESH:D015451
920 170-175 Mutation denotes S329D p.S329D
921 180-185 Mutation denotes I332E p.I332E

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T388 14-22 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T389 104-115 Body_part denotes lymphocytic http://purl.org/sig/ont/fma/fma62863

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T84 96-124 Disease denotes chronic lymphocytic leukemia http://purl.obolibrary.org/obo/MONDO_0004948
T85 104-124 Disease denotes lymphocytic leukemia http://purl.obolibrary.org/obo/MONDO_0005402
T86 116-124 Disease denotes leukemia http://purl.obolibrary.org/obo/MONDO_0005059

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T821 9-13 http://purl.obolibrary.org/obo/CLO_0053432 denotes CD19
T822 166-168 http://purl.obolibrary.org/obo/CLO_0052676 denotes Fc
T823 215-217 http://purl.obolibrary.org/obo/CLO_0052676 denotes Fc
T824 259-261 http://purl.obolibrary.org/obo/CLO_0052676 denotes Fc

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes pubann:has_HGVS_notation
914 215-223 Gene denotes FcγRIIIa Gene:2214
915 259-267 Gene denotes FcγRIIIa Gene:2214
918 96-124 Disease denotes chronic lymphocytic leukemia MESH:D015451
920 170-175 Mutation denotes S329D p.S329D
921 180-185 Mutation denotes I332E p.I332E

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T276 0-280 Sentence denotes The anti‐CD19 antibody MOR208 (XmAb 5574) is currently in phase III trials for the treatment of chronic lymphocytic leukemia.92 It contains two mutations in its IgG1 Fc, S329D and I332E, which increases affinity to FcγRIIIa, particularly the “lower‐affinity” FcγRIIIa F158 allele.

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T596 9-13 Protein denotes CD19 https://www.uniprot.org/uniprot/Q9BRD6|https://www.uniprot.org/uniprot/Q96S68|https://www.uniprot.org/uniprot/Q542B2|https://www.uniprot.org/uniprot/Q3LRP3|https://www.uniprot.org/uniprot/P25918|https://www.uniprot.org/uniprot/P25917|https://www.uniprot.org/uniprot/P15391|https://www.uniprot.org/uniprot/F5H635|https://www.uniprot.org/uniprot/A0N0P9

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T387 14-22 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T388 104-115 Body_part denotes lymphocytic http://purl.org/sig/ont/fma/fma62863

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T37 96-124 Disease denotes chronic lymphocytic leukemia http://purl.obolibrary.org/obo/MONDO_0004948

LitCovid-sample-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T33 96-124 Phenotype denotes chronic lymphocytic leukemia http://purl.obolibrary.org/obo/HP_0005550

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T276 0-280 Sentence denotes The anti‐CD19 antibody MOR208 (XmAb 5574) is currently in phase III trials for the treatment of chronic lymphocytic leukemia.92 It contains two mutations in its IgG1 Fc, S329D and I332E, which increases affinity to FcγRIIIa, particularly the “lower‐affinity” FcγRIIIa F158 allele.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T33 96-124 Phenotype denotes chronic lymphocytic leukemia http://purl.obolibrary.org/obo/HP_0005550