PMC:7224649 / 4239-4872
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 151 | 0-4 | Gene | denotes | IL-6 | Gene:3569 |
| 152 | 279-283 | Gene | denotes | IL-6 | Gene:3569 |
| 153 | 300-308 | Gene | denotes | IL-1beta | Gene:3552 |
| 154 | 336-339 | Gene | denotes | TNF | Gene:7124 |
| 155 | 559-563 | Gene | denotes | IL-6 | Gene:3569 |
| 156 | 313-327 | Disease | denotes | tumor necrosis | MESH:D009336 |
| 157 | 545-557 | Disease | denotes | inflammation | MESH:D007249 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T21 | 43-48 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T22 | 56-69 | Body_part | denotes | immune system | http://purl.org/sig/ont/fma/fma9825 |
| T23 | 70-75 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T24 | 85-98 | Body_part | denotes | B lymphocytes | http://purl.org/sig/ont/fma/fma62869 |
| T25 | 100-113 | Body_part | denotes | T lymphocytes | http://purl.org/sig/ont/fma/fma62870 |
| T26 | 115-126 | Body_part | denotes | macrophages | http://purl.org/sig/ont/fma/fma63261 |
| T27 | 128-143 | Body_part | denotes | dendritic cells | http://purl.org/sig/ont/fma/fma273565 |
| T28 | 138-143 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T29 | 145-154 | Body_part | denotes | monocytes | http://purl.org/sig/ont/fma/fma62864 |
| T30 | 156-166 | Body_part | denotes | mast cells | http://purl.org/sig/ont/fma/fma66784 |
| T31 | 161-166 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T32 | 180-191 | Body_part | denotes | lymphocytes | http://purl.org/sig/ont/fma/fma62863 |
| T33 | 201-211 | Body_part | denotes | fibroblast | http://purl.org/sig/ont/fma/fma63877 |
| T34 | 216-233 | Body_part | denotes | endothelial cells | http://purl.org/sig/ont/fma/fma66772 |
| T35 | 228-233 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T36 | 492-501 | Body_part | denotes | cytokines | http://purl.org/sig/ont/fma/fma84050 |
| T37 | 579-588 | Body_part | denotes | monocytes | http://purl.org/sig/ont/fma/fma62864 |
| T38 | 593-604 | Body_part | denotes | macrophages | http://purl.org/sig/ont/fma/fma63261 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T5 | 56-69 | Body_part | denotes | immune system | http://purl.obolibrary.org/obo/UBERON_0002405 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T31 | 313-318 | Disease | denotes | tumor | http://purl.obolibrary.org/obo/MONDO_0005070 |
| T32 | 534-544 | Disease | denotes | infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T33 | 545-557 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T43 | 35-48 | http://purl.obolibrary.org/obo/CL_0000499 | denotes | stromal cells |
| T44 | 56-69 | http://purl.obolibrary.org/obo/UBERON_0002405 | denotes | immune system |
| T45 | 70-75 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T46 | 85-86 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T47 | 128-143 | http://purl.obolibrary.org/obo/CL_0000451 | denotes | dendritic cells |
| T48 | 145-154 | http://purl.obolibrary.org/obo/CL_0000576 | denotes | monocytes |
| T49 | 161-166 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T50 | 201-211 | http://purl.obolibrary.org/obo/CL_0000057 | denotes | fibroblast |
| T51 | 216-233 | http://purl.obolibrary.org/obo/CL_0000115 | denotes | endothelial cells |
| T52 | 245-255 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activators |
| T53 | 579-588 | http://purl.obolibrary.org/obo/CL_0000576 | denotes | monocytes |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T40 | 0-2 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
| T42 | 279-281 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
| T44 | 300-302 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
| T46 | 438-452 | Chemical | denotes | prostaglandins | http://purl.obolibrary.org/obo/CHEBI_26333 |
| T47 | 559-561 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11 | 319-327 | http://purl.obolibrary.org/obo/GO_0070265 | denotes | necrosis |
| T12 | 319-327 | http://purl.obolibrary.org/obo/GO_0019835 | denotes | necrosis |
| T13 | 319-327 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | necrosis |
| T14 | 319-327 | http://purl.obolibrary.org/obo/GO_0001906 | denotes | necrosis |
| T15 | 392-401 | http://purl.obolibrary.org/obo/GO_0046903 | denotes | secretion |
| T16 | 545-557 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T7 | 313-318 | Phenotype | denotes | tumor | http://purl.obolibrary.org/obo/HP_0002664 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T34 | 0-239 | Sentence | denotes | IL-6 can be produced by almost all stromal cells and by immune system cells, such as B lymphocytes, T lymphocytes, macrophages, dendritic cells, monocytes, mast cells and many non-lymphocytes, such as fibroblast and endothelial cells [12]. |
| T35 | 240-507 | Sentence | denotes | Main activators of the Interleuking-6 (IL-6) expression are IL-1beta and tumor necrosis factor (TNF-alfa), but many other factors can contribute to its secretion such as Toll-like receptors (TLRs), prostaglandins, adipokines, stress response and other cytokines [13]. |
| T36 | 508-633 | Sentence | denotes | In the early stage of the infectious inflammation, IL-6 is produced by monocytes and macrophages stimulated by the TLRs [14]. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32421092-30254251-24602237 | 235-237 | 30254251 | denotes | 12 |
| 32421092-25898198-24602238 | 503-505 | 25898198 | denotes | 13 |