PMC:7219429 / 17088-17583
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T93 | 38-45 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T94 | 100-110 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
| T95 | 317-322 | Body_part | denotes | lipid | http://purl.org/sig/ont/fma/fma67264 |
| T96 | 328-343 | Body_part | denotes | plasma membrane | http://purl.org/sig/ont/fma/fma63841 |
| T97 | 385-395 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
| T98 | 436-440 | Body_part | denotes | axis | http://purl.org/sig/ont/fma/fma12520 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T168 | 100-118 | http://purl.obolibrary.org/obo/CHEBI_33708 | denotes | amino acid residue |
| T169 | 100-118 | http://purl.obolibrary.org/obo/PR_000036907 | denotes | amino acid residue |
| T170 | 150-152 | http://purl.obolibrary.org/obo/CLO_0007622 | denotes | MD |
| T171 | 315-316 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T172 | 328-334 | http://purl.obolibrary.org/obo/UBERON_0001969 | denotes | plasma |
| T173 | 335-343 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
| T174 | 376-377 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T175 | 385-403 | http://purl.obolibrary.org/obo/CHEBI_33708 | denotes | amino acid residue |
| T176 | 385-403 | http://purl.obolibrary.org/obo/PR_000036907 | denotes | amino acid residue |
| T177 | 492-494 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T285 | 38-45 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T286 | 46-49 | Chemical | denotes | ATM | http://purl.obolibrary.org/obo/CHEBI_2955 |
| T287 | 60-63 | Chemical | denotes | GM1 | http://purl.obolibrary.org/obo/CHEBI_18216|http://purl.obolibrary.org/obo/CHEBI_61048|http://purl.obolibrary.org/obo/CHEBI_73110 |
| T290 | 100-118 | Chemical | denotes | amino acid residue | http://purl.obolibrary.org/obo/CHEBI_33708 |
| T291 | 100-110 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T292 | 100-105 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T293 | 106-110 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T294 | 129-131 | Chemical | denotes | SD | http://purl.obolibrary.org/obo/CHEBI_74807 |
| T295 | 150-152 | Chemical | denotes | MD | http://purl.obolibrary.org/obo/CHEBI_74699 |
| T296 | 231-234 | Chemical | denotes | GM1 | http://purl.obolibrary.org/obo/CHEBI_18216|http://purl.obolibrary.org/obo/CHEBI_61048|http://purl.obolibrary.org/obo/CHEBI_73110 |
| T299 | 276-289 | Chemical | denotes | sphingomyelin | http://purl.obolibrary.org/obo/CHEBI_17636|http://purl.obolibrary.org/obo/CHEBI_64583 |
| T301 | 294-305 | Chemical | denotes | cholesterol | http://purl.obolibrary.org/obo/CHEBI_16113 |
| T302 | 317-322 | Chemical | denotes | lipid | http://purl.obolibrary.org/obo/CHEBI_18059 |
| T303 | 385-403 | Chemical | denotes | amino acid residue | http://purl.obolibrary.org/obo/CHEBI_33708 |
| T304 | 385-395 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T305 | 385-390 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T306 | 391-395 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
LitCovid-PD-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
|---|---|---|---|---|---|
| T16 | 60-63 | GlycoEpitope | denotes | GM1 | http://www.glycoepitope.jp/epitopes/EP0050 |
| T17 | 231-234 | GlycoEpitope | denotes | GM1 | http://www.glycoepitope.jp/epitopes/EP0050 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T126 | 0-74 | Sentence | denotes | Fig. 5 Energy of interaction of spike protein-ATM and spike-GM1 complexes. |
| T127 | 75-215 | Sentence | denotes | Results are expressed by amino acid residue as mean ± SD of three distinct MD simulations (50 ns) with the same starting docking conditions. |
| T128 | 216-351 | Sentence | denotes | In the case of GM1, the simulations are done in presence of sphingomyelin and cholesterol to mimic a lipid raft plasma membrane domain. |
| T129 | 352-441 | Sentence | denotes | Each bar corresponds to a single amino acid residue, as indicated in the horizontal axis. |
| T130 | 442-495 | Sentence | denotes | Detailed values and statistics are shown in Table S1. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 414 | 32-37 | Gene | denotes | spike | Gene:43740568 |
| 415 | 54-59 | Gene | denotes | spike | Gene:43740568 |
| 416 | 231-234 | Chemical | denotes | GM1 | MESH:D005677 |
| 417 | 276-289 | Chemical | denotes | sphingomyelin | MESH:D013109 |
| 418 | 294-305 | Chemical | denotes | cholesterol | MESH:D002784 |
| 419 | 317-322 | Chemical | denotes | lipid | MESH:D008055 |