PMC:7219429 / 16057-16795
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T87 | 77-84 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T88 | 118-125 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T89 | 172-179 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T90 | 399-406 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T91 | 605-615 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T161 | 87-88 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T162 | 373-374 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
| T163 | 413-415 | http://purl.obolibrary.org/obo/CLO_0007622 | denotes | MD |
| T164 | 466-469 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T165 | 491-492 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T261 | 60-63 | Chemical | denotes | ATM | http://purl.obolibrary.org/obo/CHEBI_2955 |
| T262 | 77-84 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T263 | 101-104 | Chemical | denotes | ATM | http://purl.obolibrary.org/obo/CHEBI_2955 |
| T264 | 118-125 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T265 | 138-141 | Chemical | denotes | ATM | http://purl.obolibrary.org/obo/CHEBI_2955 |
| T266 | 172-179 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T267 | 249-252 | Chemical | denotes | ATM | http://purl.obolibrary.org/obo/CHEBI_2955 |
| T268 | 253-261 | Chemical | denotes | molecule | http://purl.obolibrary.org/obo/CHEBI_25367 |
| T269 | 376-379 | Chemical | denotes | ATM | http://purl.obolibrary.org/obo/CHEBI_2955 |
| T270 | 399-406 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T271 | 413-415 | Chemical | denotes | MD | http://purl.obolibrary.org/obo/CHEBI_74699 |
| T272 | 541-544 | Chemical | denotes | ATM | http://purl.obolibrary.org/obo/CHEBI_2955 |
| T273 | 605-615 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T274 | 605-610 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T275 | 611-615 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T276 | 659-662 | Chemical | denotes | ATM | http://purl.obolibrary.org/obo/CHEBI_2955 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T116 | 138-229 | Sentence | denotes | ATM is in yellow spheres, and the protein segment 134-137 is in balls and sticks rendition. |
| T117 | 230-288 | Sentence | denotes | Three parts of the ATM molecule are marked with asterisks. |
| T118 | 289-443 | Sentence | denotes | The orientation of the side chains of residues 134-137 is shown under the complex. (b) ATM bound to the spike protein after MD simulations (time = 50 ns). |
| T119 | 444-523 | Sentence | denotes | Note that the complex has evolved according to a typical induced-fit mechanism. |
| T120 | 524-587 | Sentence | denotes | The asterisks on ATM help visualize its conformational changes. |
| T121 | 588-738 | Sentence | denotes | Reorientation of amino acid side chains is also clearly visible in the ATM-spike complex and in the isolated 134-137 fragment shown under the complex. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 392 | 71-76 | Gene | denotes | spike | Gene:43740568 |
| 393 | 112-117 | Gene | denotes | spike | Gene:43740568 |
| 394 | 393-398 | Gene | denotes | spike | Gene:43740568 |
| 395 | 663-668 | Gene | denotes | spike | Gene:43740568 |