PMC:7212965 / 6155-7801
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T19 | 336-342 | Body_part | denotes | muscle | http://purl.org/sig/ont/fma/fma32558 |
| T20 | 364-370 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T21 | 1058-1063 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T15 | 364-370 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T16 | 1058-1063 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T42 | 72-96 | Disease | denotes | Coronavirus Disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T43 | 153-161 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T44 | 273-281 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T45 | 359-370 | Disease | denotes | sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
| T46 | 591-599 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T47 | 639-647 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T48 | 724-732 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T49 | 753-761 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T50 | 843-851 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T51 | 937-945 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T52 | 1103-1111 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T53 | 1244-1252 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T54 | 1342-1350 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T55 | 1508-1516 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T56 | 1574-1582 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T50 | 226-227 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T51 | 336-342 | http://purl.obolibrary.org/obo/UBERON_0001630 | denotes | muscle |
| T52 | 336-342 | http://purl.obolibrary.org/obo/UBERON_0005090 | denotes | muscle |
| T53 | 336-342 | http://www.ebi.ac.uk/efo/EFO_0000801 | denotes | muscle |
| T54 | 336-342 | http://www.ebi.ac.uk/efo/EFO_0001949 | denotes | muscle |
| T55 | 414-415 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T56 | 702-703 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T57 | 717-718 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T58 | 762-769 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T59 | 860-861 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T60 | 1064-1071 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T21 | 652-654 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T22 | 882-884 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T23 | 1489-1493 | Chemical | denotes | drug | http://purl.obolibrary.org/obo/CHEBI_23888 |
| T24 | 1555-1559 | Chemical | denotes | drug | http://purl.obolibrary.org/obo/CHEBI_23888 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T35 | 153-161 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T36 | 293-298 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T37 | 300-305 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T38 | 307-326 | Phenotype | denotes | shortness of breath | http://purl.obolibrary.org/obo/HP_0002098 |
| T39 | 328-334 | Phenotype | denotes | chills | http://purl.obolibrary.org/obo/HP_0025143 |
| T40 | 336-347 | Phenotype | denotes | muscle pain | http://purl.obolibrary.org/obo/HP_0003326 |
| T41 | 349-357 | Phenotype | denotes | headache | http://purl.obolibrary.org/obo/HP_0002315 |
| T42 | 359-370 | Phenotype | denotes | sore throat | http://purl.obolibrary.org/obo/HP_0033050 |
| T43 | 379-392 | Phenotype | denotes | loss of taste | http://purl.obolibrary.org/obo/HP_0000223 |
| T44 | 466-482 | Phenotype | denotes | nausea, vomiting | http://purl.obolibrary.org/obo/HP_0002017 |
| T45 | 488-502 | Phenotype | denotes | abdominal pain | http://purl.obolibrary.org/obo/HP_0002027 |
| T46 | 553-569 | Phenotype | denotes | nausea, vomiting | http://purl.obolibrary.org/obo/HP_0002017 |
| T47 | 571-585 | Phenotype | denotes | abdominal pain | http://purl.obolibrary.org/obo/HP_0002027 |
| T48 | 591-599 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T49 | 899-915 | Phenotype | denotes | nausea, vomiting | http://purl.obolibrary.org/obo/HP_0002017 |
| T50 | 917-931 | Phenotype | denotes | abdominal pain | http://purl.obolibrary.org/obo/HP_0002027 |
| T51 | 937-945 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 387-392 | http://purl.obolibrary.org/obo/GO_0050909 | denotes | taste |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T34 | 0-44 | Sentence | denotes | Table 1 Summary of Best Practice Statements: |
| T35 | 45-96 | Sentence | denotes | Consultative Management of Coronavirus Disease 2019 |
| T36 | 97-110 | Sentence | denotes | Statement no. |
| T37 | 111-120 | Sentence | denotes | Statement |
| T38 | 121-503 | Sentence | denotes | 1 In outpatients with new-onset diarrhea, ascertain information about high-risk contact exposure; obtain a detailed history of symptoms associated with COVID-19, including fever, cough, shortness of breath, chills, muscle pain, headache, sore throat, or new loss of taste or smell; and obtain a thorough history for other Gl symptoms, including nausea, vomiting, and abdominal pain. |
| T39 | 504-713 | Sentence | denotes | 2 In outpatients with new-onset Gl symptoms (eg, nausea, vomiting, abdominal pain, and diarrhea), monitor for symptoms associated with COVID-19, as GI symptoms may precede COVID-related symptoms by a few days. |
| T40 | 714-791 | Sentence | denotes | In a high COVID-19 prevalence setting, COVID-19 testing should be considered. |
| T41 | 792-1005 | Sentence | denotes | 3 In hospitalized patients with suspected or known COVID-19, obtain a thorough history of GI symptoms (ie, nausea, vomiting, abdominal pain, and diarrhea), including onset, characteristics, duration, and severity. |
| T42 | 1006-1149 | Sentence | denotes | 4 There is presently inadequate evidence to support stool testing for diagnosis or monitoring of COVID-19 as part of routine clinical practice. |
| T43 | 1150-1290 | Sentence | denotes | 5 In patients (outpatients or inpatients) with elevated LFTs in context of suspected or known COVID-19, evaluate for alternative etiologies. |
| T44 | 1291-1516 | Sentence | denotes | 6 In hospitalized patients with suspected or known COVID-19, obtain baseline LFTs at the time of admission and consider LFT monitoring throughout the hospitalization, particularly in the context of drug treatment for COVID-19 |
| T45 | 1517-1646 | Sentence | denotes | 7 In hospitalized patients undergoing drug treatment for COVID-19, evaluate for treatment-related Gl and hepatic adverse effects. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 227 | 882-884 | Gene | denotes | GI | Gene:2770 |
| 228 | 652-654 | Gene | denotes | GI | Gene:2770 |
| 229 | 810-818 | Species | denotes | patients | Tax:9606 |
| 230 | 1155-1163 | Species | denotes | patients | Tax:9606 |
| 231 | 1309-1317 | Species | denotes | patients | Tax:9606 |
| 232 | 1535-1543 | Species | denotes | patients | Tax:9606 |
| 233 | 153-161 | Disease | denotes | diarrhea | MESH:D003967 |
| 234 | 273-281 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 235 | 293-298 | Disease | denotes | fever | MESH:D005334 |
| 236 | 300-305 | Disease | denotes | cough | MESH:D003371 |
| 237 | 307-326 | Disease | denotes | shortness of breath | MESH:D004417 |
| 238 | 336-347 | Disease | denotes | muscle pain | MESH:D063806 |
| 239 | 349-357 | Disease | denotes | headache | MESH:D006261 |
| 240 | 359-370 | Disease | denotes | sore throat | MESH:D010608 |
| 241 | 466-472 | Disease | denotes | nausea | MESH:D009325 |
| 242 | 474-482 | Disease | denotes | vomiting | MESH:D014839 |
| 243 | 488-502 | Disease | denotes | abdominal pain | MESH:D015746 |
| 244 | 553-559 | Disease | denotes | nausea | MESH:D009325 |
| 245 | 561-569 | Disease | denotes | vomiting | MESH:D014839 |
| 246 | 571-585 | Disease | denotes | abdominal pain | MESH:D015746 |
| 247 | 591-599 | Disease | denotes | diarrhea | MESH:D003967 |
| 248 | 639-647 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 249 | 676-681 | Disease | denotes | COVID | MESH:C000657245 |
| 250 | 724-732 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 251 | 753-761 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 252 | 843-851 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 253 | 899-905 | Disease | denotes | nausea | MESH:D009325 |
| 254 | 907-915 | Disease | denotes | vomiting | MESH:D014839 |
| 255 | 917-931 | Disease | denotes | abdominal pain | MESH:D015746 |
| 256 | 937-945 | Disease | denotes | diarrhea | MESH:D003967 |
| 257 | 1103-1111 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 258 | 1244-1252 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 259 | 1342-1350 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 260 | 1508-1516 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 261 | 1574-1582 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 263 | 72-96 | Disease | denotes | Coronavirus Disease 2019 | MESH:C000657245 |