PMC:7212965 / 56411-57251
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T126 | 174-180 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
T127 | 217-222 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
T128 | 345-350 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
T129 | 751-755 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T130 | 767-772 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T94 | 174-180 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
T95 | 217-222 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
T96 | 345-350 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T97 | 751-755 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T98 | 767-772 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T279 | 164-172 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T280 | 389-397 | Disease | denotes | Diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
T281 | 665-673 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T391 | 217-222 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
T392 | 345-350 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T393 | 345-350 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
T394 | 458-460 | http://purl.obolibrary.org/obo/CLO_0053799 | denotes | 45 |
T395 | 751-755 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T396 | 751-755 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T397 | 767-772 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T75502 | 81-83 | Chemical | denotes | NR | http://purl.obolibrary.org/obo/CHEBI_145751 |
T91134 | 275-277 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
T35992 | 386-388 | Chemical | denotes | NR | http://purl.obolibrary.org/obo/CHEBI_145751 |
T57107 | 647-649 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
T74145 | 776-779 | Chemical | denotes | AST | http://purl.obolibrary.org/obo/CHEBI_76649 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T245 | 389-397 | Phenotype | denotes | Diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
T246 | 442-446 | Phenotype | denotes | pain | http://purl.obolibrary.org/obo/HP_0012531 |
T247 | 576-584 | Phenotype | denotes | vomiting | http://purl.obolibrary.org/obo/HP_0002013 |
T248 | 665-673 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
T249 | 675-689 | Phenotype | denotes | abdominal pain | http://purl.obolibrary.org/obo/HP_0002027 |
T250 | 691-707 | Phenotype | denotes | nausea, vomiting | http://purl.obolibrary.org/obo/HP_0002017 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T377 | 0-43 | Sentence | denotes | Luo, 202050Zhongnan Hospital (Wuhan)Dates: |
T378 | 44-101 | Sentence | denotes | 01/01/2020-02/20/2020Last follow-up: NR n = 1141Survival: |
T379 | 102-147 | Sentence | denotes | 3.8% (7/183) death, 96.2% recoveredInclusion: |
T380 | 148-194 | Sentence | denotes | Inpatients with COVID-19 (throat swab RT-PCR). |
T381 | 195-226 | Sentence | denotes | All patients received chest CT. |
T382 | 227-319 | Sentence | denotes | Details only provided for the 183 patients with GI symptoms.Age: m 53.8 y (183 patients)Sex: |
T383 | 320-398 | Sentence | denotes | 44.3% (81/183) femalesGI/liver comorbidities: NRDisease severity: NR Diarrhea: |
T384 | 399-447 | Sentence | denotes | 6.0% (n = 68)Present on admissionAbdominal pain: |
T385 | 448-488 | Sentence | denotes | 3.9% (n = 45)Present on admissionNausea: |
T386 | 489-533 | Sentence | denotes | 11.7% (n = 134)Present on admissionVomiting: |
T387 | 534-585 | Sentence | denotes | 10.4% (119)Present on admissionNausea and vomiting: |
T388 | 586-734 | Sentence | denotes | 3.2% (n = 37)Present on admission183 patients presented with GI symptoms only (diarrhea, abdominal pain, nausea, vomiting, and/or loss of appetite). |
T389 | 735-840 | Sentence | denotes | 96% of them had lung lesions on chest CT AST (183 patients) m 65.8 ± 12.7ALT (183 patients) m 66.4 ± 13.2 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
2220 | 647-649 | Gene | denotes | GI | Gene:2770 |
2221 | 275-277 | Gene | denotes | GI | Gene:2770 |
2223 | 199-207 | Species | denotes | patients | Tax:9606 |
2224 | 261-269 | Species | denotes | patients | Tax:9606 |
2225 | 306-314 | Species | denotes | patients | Tax:9606 |
2226 | 623-631 | Species | denotes | patients | Tax:9606 |
2227 | 785-793 | Species | denotes | patients | Tax:9606 |
2228 | 817-825 | Species | denotes | patients | Tax:9606 |
2308 | 115-120 | Disease | denotes | death | MESH:D003643 |
2309 | 164-172 | Disease | denotes | COVID-19 | MESH:C000657245 |
2310 | 389-397 | Disease | denotes | Diarrhea | MESH:D003967 |
2311 | 442-446 | Disease | denotes | pain | MESH:D010146 |
2312 | 576-584 | Disease | denotes | vomiting | MESH:D014839 |
2313 | 665-673 | Disease | denotes | diarrhea | MESH:D003967 |
2314 | 675-689 | Disease | denotes | abdominal pain | MESH:D015746 |
2315 | 691-697 | Disease | denotes | nausea | MESH:D009325 |
2316 | 699-707 | Disease | denotes | vomiting | MESH:D014839 |
2317 | 716-732 | Disease | denotes | loss of appetite | MESH:D001068 |
2318 | 751-763 | Disease | denotes | lung lesions | MESH:D008171 |