PMC:7212949 / 7744-8513 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T32","span":{"begin":22,"end":28},"obj":"Body_part"},{"id":"T33","span":{"begin":108,"end":114},"obj":"Body_part"}],"attributes":[{"id":"A32","pred":"fma_id","subj":"T32","obj":"http://purl.org/sig/ont/fma/fma228738"},{"id":"A33","pred":"fma_id","subj":"T33","obj":"http://purl.org/sig/ont/fma/fma228738"}],"text":" Dyspnea (59%)\n• Sore throat (12%)\nRhinorrhea (9%) • Cough (100%)\n• Tachypnea (100%)\n• Fever (87.1%)\n• Sore throat (25.8%)\n• Crackles (93.5 %)\nRhonchi (32.3 %)\nKey findings on investigations CXR abnormality (100%) – ARDS pattern CXR, CT: lobular to bilateral extensive ARDS pattern N/A CXR abnormality (96.4%)\nKey study findings and message • 89% ICU admission\n• 72% mechanical ventilation\n• 60% case fatality rate 100% invasive mechanical ventilation, mean duration 100 days • Dyspnea before admission was associated with a more severe outcome (P \u003c 0.001)\nProlonged MERS-CoV detection in URT in diabetics (P = 0.049) • 87.1 % invasive mechanical ventilation (87.1%)\n• 74.2% overall ICU mortality rate\n• Mortality in ICU associated with older age, severe disease and or"}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T28","span":{"begin":22,"end":28},"obj":"Body_part"},{"id":"T29","span":{"begin":108,"end":114},"obj":"Body_part"}],"attributes":[{"id":"A28","pred":"uberon_id","subj":"T28","obj":"http://purl.obolibrary.org/obo/UBERON_0000341"},{"id":"A29","pred":"uberon_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/UBERON_0000341"}],"text":" Dyspnea (59%)\n• Sore throat (12%)\nRhinorrhea (9%) • Cough (100%)\n• Tachypnea (100%)\n• Fever (87.1%)\n• Sore throat (25.8%)\n• Crackles (93.5 %)\nRhonchi (32.3 %)\nKey findings on investigations CXR abnormality (100%) – ARDS pattern CXR, CT: lobular to bilateral extensive ARDS pattern N/A CXR abnormality (96.4%)\nKey study findings and message • 89% ICU admission\n• 72% mechanical ventilation\n• 60% case fatality rate 100% invasive mechanical ventilation, mean duration 100 days • Dyspnea before admission was associated with a more severe outcome (P \u003c 0.001)\nProlonged MERS-CoV detection in URT in diabetics (P = 0.049) • 87.1 % invasive mechanical ventilation (87.1%)\n• 74.2% overall ICU mortality rate\n• Mortality in ICU associated with older age, severe disease and or"}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T48","span":{"begin":17,"end":28},"obj":"Disease"},{"id":"T49","span":{"begin":103,"end":114},"obj":"Disease"},{"id":"T50","span":{"begin":216,"end":220},"obj":"Disease"},{"id":"T51","span":{"begin":269,"end":273},"obj":"Disease"}],"attributes":[{"id":"A48","pred":"mondo_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/MONDO_0002258"},{"id":"A49","pred":"mondo_id","subj":"T49","obj":"http://purl.obolibrary.org/obo/MONDO_0002258"},{"id":"A50","pred":"mondo_id","subj":"T50","obj":"http://purl.obolibrary.org/obo/MONDO_0006502"},{"id":"A51","pred":"mondo_id","subj":"T51","obj":"http://purl.obolibrary.org/obo/MONDO_0006502"}],"text":" Dyspnea (59%)\n• Sore throat (12%)\nRhinorrhea (9%) • Cough (100%)\n• Tachypnea (100%)\n• Fever (87.1%)\n• Sore throat (25.8%)\n• Crackles (93.5 %)\nRhonchi (32.3 %)\nKey findings on investigations CXR abnormality (100%) – ARDS pattern CXR, CT: lobular to bilateral extensive ARDS pattern N/A CXR abnormality (96.4%)\nKey study findings and message • 89% ICU admission\n• 72% mechanical ventilation\n• 60% case fatality rate 100% invasive mechanical ventilation, mean duration 100 days • Dyspnea before admission was associated with a more severe outcome (P \u003c 0.001)\nProlonged MERS-CoV detection in URT in diabetics (P = 0.049) • 87.1 % invasive mechanical ventilation (87.1%)\n• 74.2% overall ICU mortality rate\n• Mortality in ICU associated with older age, severe disease and or"}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T54","span":{"begin":284,"end":285},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T55","span":{"begin":523,"end":524},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":" Dyspnea (59%)\n• Sore throat (12%)\nRhinorrhea (9%) • Cough (100%)\n• Tachypnea (100%)\n• Fever (87.1%)\n• Sore throat (25.8%)\n• Crackles (93.5 %)\nRhonchi (32.3 %)\nKey findings on investigations CXR abnormality (100%) – ARDS pattern CXR, CT: lobular to bilateral extensive ARDS pattern N/A CXR abnormality (96.4%)\nKey study findings and message • 89% ICU admission\n• 72% mechanical ventilation\n• 60% case fatality rate 100% invasive mechanical ventilation, mean duration 100 days • Dyspnea before admission was associated with a more severe outcome (P \u003c 0.001)\nProlonged MERS-CoV detection in URT in diabetics (P = 0.049) • 87.1 % invasive mechanical ventilation (87.1%)\n• 74.2% overall ICU mortality rate\n• Mortality in ICU associated with older age, severe disease and or"}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T52","span":{"begin":1,"end":8},"obj":"Phenotype"},{"id":"T53","span":{"begin":17,"end":28},"obj":"Phenotype"},{"id":"T54","span":{"begin":35,"end":45},"obj":"Phenotype"},{"id":"T55","span":{"begin":53,"end":58},"obj":"Phenotype"},{"id":"T56","span":{"begin":68,"end":77},"obj":"Phenotype"},{"id":"T57","span":{"begin":87,"end":92},"obj":"Phenotype"},{"id":"T58","span":{"begin":103,"end":114},"obj":"Phenotype"},{"id":"T59","span":{"begin":125,"end":133},"obj":"Phenotype"},{"id":"T60","span":{"begin":143,"end":150},"obj":"Phenotype"},{"id":"T61","span":{"begin":478,"end":485},"obj":"Phenotype"}],"attributes":[{"id":"A52","pred":"hp_id","subj":"T52","obj":"http://purl.obolibrary.org/obo/HP_0002094"},{"id":"A53","pred":"hp_id","subj":"T53","obj":"http://purl.obolibrary.org/obo/HP_0033050"},{"id":"A54","pred":"hp_id","subj":"T54","obj":"http://purl.obolibrary.org/obo/HP_0031417"},{"id":"A55","pred":"hp_id","subj":"T55","obj":"http://purl.obolibrary.org/obo/HP_0012735"},{"id":"A56","pred":"hp_id","subj":"T56","obj":"http://purl.obolibrary.org/obo/HP_0002789"},{"id":"A57","pred":"hp_id","subj":"T57","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A58","pred":"hp_id","subj":"T58","obj":"http://purl.obolibrary.org/obo/HP_0033050"},{"id":"A59","pred":"hp_id","subj":"T59","obj":"http://purl.obolibrary.org/obo/HP_0030830"},{"id":"A60","pred":"hp_id","subj":"T60","obj":"http://purl.obolibrary.org/obo/HP_0030831"},{"id":"A61","pred":"hp_id","subj":"T61","obj":"http://purl.obolibrary.org/obo/HP_0002094"}],"text":" Dyspnea (59%)\n• Sore throat (12%)\nRhinorrhea (9%) • Cough (100%)\n• Tachypnea (100%)\n• Fever (87.1%)\n• Sore throat (25.8%)\n• Crackles (93.5 %)\nRhonchi (32.3 %)\nKey findings on investigations CXR abnormality (100%) – ARDS pattern CXR, CT: lobular to bilateral extensive ARDS pattern N/A CXR abnormality (96.4%)\nKey study findings and message • 89% ICU admission\n• 72% mechanical ventilation\n• 60% case fatality rate 100% invasive mechanical ventilation, mean duration 100 days • Dyspnea before admission was associated with a more severe outcome (P \u003c 0.001)\nProlonged MERS-CoV detection in URT in diabetics (P = 0.049) • 87.1 % invasive mechanical ventilation (87.1%)\n• 74.2% overall ICU mortality rate\n• Mortality in ICU associated with older age, severe disease and or"}

{"project":"LitCovid-sentences","denotations":[{"id":"T117","span":{"begin":15,"end":34},"obj":"Sentence"},{"id":"T118","span":{"begin":35,"end":65},"obj":"Sentence"},{"id":"T119","span":{"begin":66,"end":84},"obj":"Sentence"},{"id":"T120","span":{"begin":85,"end":100},"obj":"Sentence"},{"id":"T121","span":{"begin":101,"end":122},"obj":"Sentence"},{"id":"T122","span":{"begin":123,"end":142},"obj":"Sentence"},{"id":"T123","span":{"begin":143,"end":159},"obj":"Sentence"},{"id":"T124","span":{"begin":160,"end":309},"obj":"Sentence"},{"id":"T125","span":{"begin":310,"end":360},"obj":"Sentence"},{"id":"T126","span":{"begin":361,"end":389},"obj":"Sentence"},{"id":"T127","span":{"begin":390,"end":556},"obj":"Sentence"},{"id":"T128","span":{"begin":557,"end":666},"obj":"Sentence"},{"id":"T129","span":{"begin":667,"end":701},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":" Dyspnea (59%)\n• Sore throat (12%)\nRhinorrhea (9%) • Cough (100%)\n• Tachypnea (100%)\n• Fever (87.1%)\n• Sore throat (25.8%)\n• Crackles (93.5 %)\nRhonchi (32.3 %)\nKey findings on investigations CXR abnormality (100%) – ARDS pattern CXR, CT: lobular to bilateral extensive ARDS pattern N/A CXR abnormality (96.4%)\nKey study findings and message • 89% ICU admission\n• 72% mechanical ventilation\n• 60% case fatality rate 100% invasive mechanical ventilation, mean duration 100 days • Dyspnea before admission was associated with a more severe outcome (P \u003c 0.001)\nProlonged MERS-CoV detection in URT in diabetics (P = 0.049) • 87.1 % invasive mechanical ventilation (87.1%)\n• 74.2% overall ICU mortality rate\n• Mortality in ICU associated with older age, severe disease and or"}

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T107","span":{"begin":22,"end":28},"obj":"UBERON:0000341"},{"id":"T108","span":{"begin":108,"end":114},"obj":"UBERON:0000341"},{"id":"T109","span":{"begin":238,"end":245},"obj":"UBERON:0009911"},{"id":"T110","span":{"begin":333,"end":340},"obj":"CHEBI:33695;CHEBI:33695"},{"id":"T111","span":{"begin":567,"end":575},"obj":"SP_9"},{"id":"T527","span":{"begin":89,"end":94},"obj":"UBERON:0000948"},{"id":"T528","span":{"begin":182,"end":187},"obj":"UBERON:0000178"},{"id":"T529","span":{"begin":202,"end":207},"obj":"UBERON:0000948"},{"id":"T530","span":{"begin":230,"end":235},"obj":"UBERON:0000948"},{"id":"T531","span":{"begin":288,"end":298},"obj":"UBERON:0002349"},{"id":"T532","span":{"begin":310,"end":315},"obj":"UBERON:0001443"},{"id":"T533","span":{"begin":353,"end":364},"obj":"GO:0015671"},{"id":"T534","span":{"begin":413,"end":420},"obj":"CHEBI:24996;CHEBI:24996"},{"id":"T535","span":{"begin":436,"end":440},"obj":"UBERON:0002084"},{"id":"T536","span":{"begin":442,"end":467},"obj":"UBERON:0002084"},{"id":"T537","span":{"begin":482,"end":492},"obj":"UBERON:0002349"},{"id":"T538","span":{"begin":505,"end":513},"obj":"SP_9"},{"id":"T539","span":{"begin":515,"end":558},"obj":"SP_9"},{"id":"T540","span":{"begin":593,"end":601},"obj":"SP_10"},{"id":"T541","span":{"begin":603,"end":615},"obj":"SP_10"},{"id":"T542","span":{"begin":616,"end":626},"obj":"SP_10;UBERON:0001004"},{"id":"T543","span":{"begin":627,"end":647},"obj":"SP_10"},{"id":"T544","span":{"begin":666,"end":674},"obj":"SP_9"},{"id":"T545","span":{"begin":712,"end":720},"obj":"SP_9"},{"id":"T546","span":{"begin":734,"end":739},"obj":"UBERON:0002107"}],"text":" Dyspnea (59%)\n• Sore throat (12%)\nRhinorrhea (9%) • Cough (100%)\n• Tachypnea (100%)\n• Fever (87.1%)\n• Sore throat (25.8%)\n• Crackles (93.5 %)\nRhonchi (32.3 %)\nKey findings on investigations CXR abnormality (100%) – ARDS pattern CXR, CT: lobular to bilateral extensive ARDS pattern N/A CXR abnormality (96.4%)\nKey study findings and message • 89% ICU admission\n• 72% mechanical ventilation\n• 60% case fatality rate 100% invasive mechanical ventilation, mean duration 100 days • Dyspnea before admission was associated with a more severe outcome (P \u003c 0.001)\nProlonged MERS-CoV detection in URT in diabetics (P = 0.049) • 87.1 % invasive mechanical ventilation (87.1%)\n• 74.2% overall ICU mortality rate\n• Mortality in ICU associated with older age, severe disease and or"}