PMC:7212949 / 70-846
Annnotations
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 19-27 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T2 | 116-126 | Disease | denotes | infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T3 | 156-164 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T4 | 321-329 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T5 | 346-355 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T6 | 482-491 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T7 | 497-505 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T8 | 522-555 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T9 | 569-577 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T10 | 660-668 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T11 | 746-755 | Disease | denotes | hepatitis | http://purl.obolibrary.org/obo/MONDO_0002251 |
| T12 | 757-776 | Disease | denotes | acute renal failure | http://purl.obolibrary.org/obo/MONDO_0002492 |
| T13 | 763-776 | Disease | denotes | renal failure | http://purl.obolibrary.org/obo/MONDO_0001106 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 166-169 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T3 | 225-228 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T4 | 337-338 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 346-355 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T2 | 373-378 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T3 | 380-385 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T4 | 390-409 | Phenotype | denotes | shortness of breath | http://purl.obolibrary.org/obo/HP_0002098 |
| T5 | 482-491 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T6 | 746-755 | Phenotype | denotes | hepatitis | http://purl.obolibrary.org/obo/HP_0012115 |
| T7 | 757-776 | Phenotype | denotes | acute renal failure | http://purl.obolibrary.org/obo/HP_0001919 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 45-53 | Sentence | denotes | Abstract |
| T3 | 54-193 | Sentence | denotes | Since December 2019, the global pandemic caused by the highly infectious novel coronavirus 2019-nCoV (COVID-19) has been rapidly spreading. |
| T4 | 194-410 | Sentence | denotes | As of April 2020, the outbreak has spread to over 210 countries, with over 2,400,000 confirmed cases and over 170,000 deaths.1 COVID-19 causes a severe pneumonia characterized by fever, cough and shortness of breath. |
| T5 | 411-639 | Sentence | denotes | Similar coronavirus outbreaks have occurred in the past causing severe pneumonia like COVID-19, most recently, severe acute respiratory syndrome coronavirus (SARS-CoV) and middle east respiratory syndrome coronavirus (MERS-CoV). |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 19-27 | SP_7 | denotes | COVID-19 |
| T3 | 133-144 | NCBITaxon:11118 | denotes | coronavirus |
| T4 | 145-154 | SP_7 | denotes | 2019-nCoV |
| T5 | 156-164 | SP_7 | denotes | COVID-19 |
| T6 | 312-318 | GO:0016265 | denotes | deaths |
| T7 | 321-329 | SP_7 | denotes | COVID-19 |
| T8 | 419-430 | NCBITaxon:11118 | denotes | coronavirus |
| T9 | 497-505 | SP_7 | denotes | COVID-19 |
| T10 | 522-534 | SP_10 | denotes | severe acute |
| T11 | 535-546 | SP_10;UBERON:0001004 | denotes | respiratory |
| T12 | 547-567 | SP_10 | denotes | syndrome coronavirus |
| T13 | 569-577 | SP_10 | denotes | SARS-CoV |
| T14 | 583-594 | SP_9 | denotes | middle east |
| T15 | 595-606 | SP_9;UBERON:0001004 | denotes | respiratory |
| T16 | 607-627 | SP_9 | denotes | syndrome coronavirus |
| T17 | 629-637 | SP_9 | denotes | MERS-CoV |
| T18 | 660-668 | SP_10 | denotes | SARS-CoV |
| T19 | 673-681 | SP_9 | denotes | MERS-CoV |
| T20 | 702-716 | UBERON:0000922 | denotes | extrapulmonary |
| T21 | 763-768 | UBERON:0002113 | denotes | renal |
| T73170 | 19-27 | SP_7 | denotes | COVID-19 |
| T55663 | 133-144 | NCBITaxon:11118 | denotes | coronavirus |
| T78143 | 145-154 | SP_7 | denotes | 2019-nCoV |
| T62393 | 156-164 | SP_7 | denotes | COVID-19 |
| T61863 | 312-318 | GO:0016265 | denotes | deaths |
| T96894 | 321-329 | SP_7 | denotes | COVID-19 |
| T54545 | 419-430 | NCBITaxon:11118 | denotes | coronavirus |
| T38951 | 497-505 | SP_7 | denotes | COVID-19 |
| T88744 | 522-534 | SP_10 | denotes | severe acute |
| T67847 | 535-546 | SP_10;UBERON:0001004 | denotes | respiratory |
| T23325 | 547-567 | SP_10 | denotes | syndrome coronavirus |
| T78542 | 569-577 | SP_10 | denotes | SARS-CoV |
| T94267 | 583-594 | SP_9 | denotes | middle east |
| T27389 | 595-606 | SP_9;UBERON:0001004 | denotes | respiratory |
| T76373 | 607-627 | SP_9 | denotes | syndrome coronavirus |
| T55951 | 629-637 | SP_9 | denotes | MERS-CoV |
| T6936 | 660-668 | SP_10 | denotes | SARS-CoV |
| T69918 | 673-681 | SP_9 | denotes | MERS-CoV |
| T87705 | 702-716 | UBERON:0000922 | denotes | extrapulmonary |
| T62718 | 763-768 | UBERON:0002113 | denotes | renal |
| T400 | 13-25 | GO:0050817 | denotes | eadly COVID- |
| T401 | 119-127 | SP_10 | denotes | ectious |
| T402 | 141-149 | SP_10 | denotes | rus 2019 |
| T403 | 268-276 | SP_10 | denotes | 2,400,0 |
| T404 | 293-298 | UBERON:0002107 | denotes | s and |
| T405 | 438-442 | G_3;PG_10;PR:000003622 | denotes | ks h |
| T406 | 475-482 | CL:0000182;UBERON:0002107 | denotes | severe |
| T407 | 483-494 | UBERON:0001986;CL:0000115 | denotes | neumonia li |
| T408 | 495-500 | CL:0000115 | denotes | e COV |
| T409 | 523-531 | SP_10 | denotes | evere ac |
| T410 | 563-568 | NCBITaxon:10239 | denotes | irus |
| T411 | 586-593 | UBERON:0002107 | denotes | dle eas |
| T412 | 594-606 | UBERON:0008987 | denotes | respiratory |
| T413 | 651-655 | PR:000001393 | denotes | er t |
| T414 | 660-665 | PR:000001471 | denotes | SARS- |
| T415 | 683-691 | SP_10 | denotes | ere show |
| T416 | 751-758 | UBERON:0002107;CL:0000182 | denotes | itis, a |
| T417 | 759-763 | CL:0000182;GO:0007049 | denotes | ute |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 3 | 19-27 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 35 | 127-144 | Species | denotes | novel coronavirus | Tax:2697049 |
| 36 | 145-154 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 37 | 419-430 | Species | denotes | coronavirus | Tax:11118 |
| 38 | 522-567 | Species | denotes | severe acute respiratory syndrome coronavirus | Tax:694009 |
| 39 | 569-577 | Species | denotes | SARS-CoV | Tax:694009 |
| 40 | 583-638 | Species | denotes | middle east respiratory syndrome coronavirus (MERS-CoV) | Tax:1335626 |
| 41 | 660-668 | Species | denotes | SARS-CoV | Tax:694009 |
| 42 | 673-681 | Species | denotes | MERS-CoV | Tax:1335626 |
| 49 | 156-164 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 50 | 312-318 | Disease | denotes | deaths | MESH:D003643 |
| 51 | 321-329 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 52 | 346-355 | Disease | denotes | pneumonia | MESH:D011014 |
| 53 | 373-378 | Disease | denotes | fever | MESH:D005334 |
| 54 | 380-385 | Disease | denotes | cough | MESH:D003371 |
| 55 | 390-409 | Disease | denotes | shortness of breath | MESH:D004417 |
| 56 | 482-491 | Disease | denotes | pneumonia | MESH:D011014 |
| 57 | 497-505 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 58 | 746-755 | Disease | denotes | hepatitis | MESH:D056486 |
| 59 | 757-776 | Disease | denotes | acute renal failure | MESH:D058186 |