PMC:7212949 / 6323-7071
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T15 | 24-34 | Body_part | denotes | lymphocyte | http://purl.org/sig/ont/fma/fma62863 |
| T16 | 48-59 | Body_part | denotes | lymph nodes | http://purl.org/sig/ont/fma/fma5034 |
| T17 | 48-53 | Body_part | denotes | lymph | http://purl.org/sig/ont/fma/fma9671 |
| T18 | 64-70 | Body_part | denotes | spleen | http://purl.org/sig/ont/fma/fma7196 |
| T19 | 79-82 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T20 | 95-117 | Body_part | denotes | type II alveolar cells | http://purl.org/sig/ont/fma/fma62501 |
| T21 | 112-117 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T22 | 132-137 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T23 | 154-170 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
| T24 | 165-170 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T25 | 402-406 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T26 | 407-413 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T18 | 48-59 | Body_part | denotes | lymph nodes | http://purl.obolibrary.org/obo/UBERON_0000029 |
| T19 | 48-53 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
| T20 | 64-70 | Body_part | denotes | spleen | http://purl.obolibrary.org/obo/UBERON_0002106 |
| T21 | 402-406 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T22 | 407-413 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T41 | 554-558 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T42 | 683-687 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T36 | 48-59 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph nodes |
| T37 | 64-70 | http://purl.obolibrary.org/obo/UBERON_0002106 | denotes | spleen |
| T38 | 112-117 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T39 | 119-137 | http://purl.obolibrary.org/obo/CL_0000178 | denotes | interstitial cells |
| T40 | 154-164 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
| T41 | 165-170 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T42 | 173-174 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T43 | 177-178 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T44 | 402-406 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T45 | 402-406 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T3 | 100-102 | Chemical | denotes | II | http://purl.obolibrary.org/obo/CHEBI_74067 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 15-23 | http://purl.obolibrary.org/obo/GO_0070265 | denotes | necrosis |
| T6 | 15-23 | http://purl.obolibrary.org/obo/GO_0019835 | denotes | necrosis |
| T7 | 15-23 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | necrosis |
| T8 | 15-23 | http://purl.obolibrary.org/obo/GO_0001906 | denotes | necrosis |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T32 | 441-446 | Phenotype | denotes | Fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T33 | 610-629 | Phenotype | denotes | Recurrence of fever | http://purl.obolibrary.org/obo/HP_0001954 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T85 | 1-70 | Sentence | denotes | • Hemorrhagic necrosis lymphocyte depletion in lymph nodes and spleen |
| T86 | 71-178 | Sentence | denotes | • Viral RNA detected in type II alveolar cells, interstitial cells and bronchiolar epithelial cells N/A N/A |
| T87 | 179-248 | Sentence | denotes | Key study findings and message • 23.2% ICU admission, at day 6 (mean) |
| T88 | 249-284 | Sentence | denotes | • 13.8% mechanical ventilation rate |
| T89 | 285-312 | Sentence | denotes | • 3.6% crude mortality rate |
| T90 | 313-479 | Sentence | denotes | • ICU patients more likely to be of older age (P = 0.009) Severe immunological damage to lung tissue causes clinical features • Fever most common and earliest symptom |
| T91 | 480-558 | Sentence | denotes | • 23% mechanical ventilation rate • 83.33% of patients with GGO developed ARDS |
| T92 | 559-587 | Sentence | denotes | • 20% mechanical ventilation |
| T93 | 588-607 | Sentence | denotes | • 17% ICU admission |
| T94 | 608-705 | Sentence | denotes | • Recurrence of fever (univariate) and age (multivariate) risk factors for ARDS and ICU admission |
| T95 | 706-710 | Sentence | denotes | MERS |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T90 | 24-34 | CL:0000542 | denotes | lymphocyte |
| T91 | 48-59 | UBERON:0000029 | denotes | lymph nodes |
| T92 | 64-70 | UBERON:0002106 | denotes | spleen |
| T93 | 95-102 | CL:0002063 | denotes | type II |
| T94 | 103-111 | CL:0002063;UBERON:0003215 | denotes | alveolar |
| T95 | 112-117 | CL:0002063 | denotes | cells |
| T96 | 119-131 | UBERON:0005169 | denotes | interstitial |
| T97 | 142-153 | UBERON:0002031 | denotes | bronchiolar |
| T98 | 154-164 | UBERON:0000483 | denotes | epithelial |
| T99 | 202-209 | CHEBI:33695;CHEBI:33695 | denotes | message |
| T100 | 402-406 | UBERON:0002048 | denotes | lung |
| T101 | 407-413 | UBERON:0000479 | denotes | tissue |
| T507 | 7-18 | CL:0000187 | denotes | rrhagic nec |
| T508 | 19-24 | GO:0019835 | denotes | osis |
| T509 | 187-197 | UBERON:0002349 | denotes | y findings |
| T510 | 214-219 | NCBITaxon:10239 | denotes | .2% I |
| T511 | 220-230 | UBERON:0002349 | denotes | U admissio |
| T512 | 320-330 | UBERON:0002349 | denotes | atients mo |
| T513 | 375-383 | UBERON:0000948 | denotes | re immun |
| T514 | 505-512 | UBERON:0000948 | denotes | ion rat |
| T515 | 548-551 | SO:0000694 | denotes | lop |
| T516 | 556-566 | CHEBI:16737;CHEBI:16737 | denotes | DS • 20% m |
| T517 | 589-591 | UBERON:0000029 | denotes | 1 |
| T518 | 606-613 | UBERON:0000948 | denotes | n • Rec |
| T519 | 672-677 | GO:0016265 | denotes | actor |
| T47028 | 736-743 | UBERON:0000948 | denotes | N = 47, |