> top > docs > PMC:7212949 > spans > 45578-46647 > annotations

PMC:7212949 / 45578-46647 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T260 127-133 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T261 843-849 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T262 861-866 Body_part denotes urine http://purl.org/sig/ont/fma/fma12274
T263 926-938 Body_part denotes Leydig cells http://purl.org/sig/ont/fma/fma72297
T264 933-938 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T265 943-963 Body_part denotes seminiferous tubules http://purl.org/sig/ont/fma/fma76513

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T150 127-133 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T151 843-849 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T152 861-866 Body_part denotes urine http://purl.obolibrary.org/obo/UBERON_0001088

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T322 0-8 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T323 36-44 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T324 121-140 Disease denotes acute kidney injury http://purl.obolibrary.org/obo/MONDO_0002492
T325 134-140 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T326 288-299 Disease denotes proteinuria http://purl.obolibrary.org/obo/MONDO_0003634
T327 507-519 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T328 602-608 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T329 801-809 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T330 1016-1022 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T331 1047-1055 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T332 1056-1065 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T460 127-133 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T461 127-133 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T462 127-133 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T463 196-197 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T464 346-348 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T465 386-388 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T466 484-490 http://purl.obolibrary.org/obo/CLO_0001658 denotes active
T467 782-784 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T468 810-815 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T469 816-819 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T470 926-938 http://purl.obolibrary.org/obo/CL_0000178 denotes Leydig cells
T471 943-963 http://purl.obolibrary.org/obo/UBERON_0001343 denotes seminiferous tubules
T472 1030-1031 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T169 360-364 Chemical denotes urea http://purl.obolibrary.org/obo/CHEBI_16199
T170 369-379 Chemical denotes creatinine http://purl.obolibrary.org/obo/CHEBI_16737

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T57 424-428 http://purl.obolibrary.org/obo/GO_0005006 denotes eGFR
T58 507-519 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T261 121-140 Phenotype denotes acute kidney injury http://purl.obolibrary.org/obo/HP_0001919
T262 273-284 Phenotype denotes albuminuria http://purl.obolibrary.org/obo/HP_0012592
T263 288-299 Phenotype denotes proteinuria http://purl.obolibrary.org/obo/HP_0000093
T264 333-342 Phenotype denotes hematuria http://purl.obolibrary.org/obo/HP_0000790
T265 497-502 Phenotype denotes edema http://purl.obolibrary.org/obo/HP_0000969

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T473 0-8 Sentence denotes COVID-19
T474 9-247 Sentence denotes Acute renal dysfunction in COVID-19 at the time of presentation is not uncommon.92 , 104 , 105 The incidence of acute kidney injury either at presentation or later is as high as 15% with a high mortality rate of 60-90%106 , 107 (Table 4).
T475 248-1069 Sentence denotes Other researchers report albuminuria or proteinuria on admission in 44-63% patients, hematuria in 27%, elevated urea and creatinine in 13-27% and 14-19%, respectively, and low eGFR in 13%.104 , 105 There may also be imaging evidence of active renal edema and inflammation.104 Since renal dysfunction is early, an immunopathology response or direct viral injury may be contributing along with other systemic factors.20 , 92 Similar to other novel CoVs, renal involvement, acute or chronic, tends to associate with an adverse prognosis.22 , 105 , 107 The COVID-19 virus has been detected in renal tissue and in the urine.39 , 70 , 108 Due to the presence of ACE2 receptors in the Leydig cells and seminiferous tubules, it is also reasonable to speculate that testicular injury may be a consequence of COVID-19 infection.109

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T1204 44-48 UBERON:0002103 denotes at
T1205 85-91 UBERON:0001456 denotes mon.92
T1206 114-126 UBERON:0001016 denotes nce of acute
T1207 212-222 UBERON:0001016 denotes rate of 6
T1208 383-390 UBERON:0002107 denotes 13-27%
T1209 395-400 UBERON:0002113 denotes 4-19%
T1210 450-458 SP_10 denotes e may al
T1211 460-468 SP_9 denotes be imag
T1212 473-481 SP_7 denotes vidence
T1213 488-493 SP_10 denotes ve re
T1214 783-787 UBERON:0002101 denotes 2 ,
T1215 867-879 UBERON:0001016 denotes 39 , 70 , 10
T1216 1052-1056 UBERON:0000978 denotes -19

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1111 0-8 Disease denotes COVID-19 MESH:C000657245
1134 904-908 Gene denotes ACE2 Gene:59272
1135 424-428 Gene denotes eGFR Gene:1956
1136 323-331 Species denotes patients Tax:9606
1137 694-698 Species denotes CoVs Tax:11118
1138 801-815 Species denotes COVID-19 virus Tax:2697049
1139 360-364 Chemical denotes urea MESH:D014508
1140 369-379 Chemical denotes creatinine MESH:D003404
1141 9-32 Disease denotes Acute renal dysfunction MESH:D058186
1142 36-44 Disease denotes COVID-19 MESH:C000657245
1143 121-140 Disease denotes acute kidney injury MESH:D058186
1144 203-212 Disease denotes mortality MESH:D003643
1145 273-284 Disease denotes albuminuria MESH:D000419
1146 288-299 Disease denotes proteinuria MESH:D011507
1147 333-342 Disease denotes hematuria MESH:D006417
1148 484-502 Disease denotes active renal edema MESH:D004487
1149 507-519 Disease denotes inflammation MESH:D007249
1150 530-547 Disease denotes renal dysfunction MESH:D007674
1151 596-608 Disease denotes viral injury
1152 700-717 Disease denotes renal involvement MESH:D007674
1153 1005-1022 Disease denotes testicular injury MESH:D013733
1154 1047-1055 Disease denotes COVID-19 MESH:C000657245
1155 1056-1065 Disease denotes infection MESH:D007239

2_test

Id Subject Object Predicate Lexical cue
32620220-32204907-2074179 89-91 32204907 denotes 92
32620220-32247631-2074180 100-103 32247631 denotes 105
32620220-32007143-2074181 227-230 32007143 denotes 106
32620220-32171076-2074182 233-236 32171076 denotes 107
32620220-32247631-2074183 442-445 32247631 denotes 105
32620220-32204907-2074184 668-670 32204907 denotes 92
32620220-31986264-2074185 782-784 31986264 denotes 22
32620220-32247631-2074186 787-790 32247631 denotes 105
32620220-32171076-2074187 793-796 32171076 denotes 107
32620220-15141376-2074188 867-869 15141376 denotes 39
32620220-12781535-2074189 872-874 12781535 denotes 70