PMC:7212949 / 37686-44329
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T210 | 1466-1469 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T211 | 1473-1478 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
| T212 | 1528-1531 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T213 | 1535-1540 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
| T214 | 1572-1577 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
| T215 | 1769-1785 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
| T216 | 1780-1785 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T217 | 1789-1794 | Body_part | denotes | bowel | http://purl.org/sig/ont/fma/fma7199 |
| T218 | 1861-1871 | Body_part | denotes | intestines | http://purl.org/sig/ont/fma/fma7199 |
| T219 | 1912-1927 | Body_part | denotes | small intestine | http://purl.org/sig/ont/fma/fma7200 |
| T220 | 2032-2046 | Body_part | denotes | gastric mucosa | http://purl.org/sig/ont/fma/fma14907 |
| T221 | 2040-2046 | Body_part | denotes | mucosa | http://purl.org/sig/ont/fma/fma85355 |
| T222 | 2103-2118 | Body_part | denotes | Lymphoid tissue | http://purl.org/sig/ont/fma/fma55220 |
| T223 | 2169-2185 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
| T224 | 2180-2185 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T225 | 2524-2532 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T226 | 2854-2865 | Body_part | denotes | lymphocytes | http://purl.org/sig/ont/fma/fma62863 |
| T227 | 3385-3395 | Body_part | denotes | intestinal | http://purl.org/sig/ont/fma/fma7199 |
| T228 | 3396-3411 | Body_part | denotes | epithelial cell | http://purl.org/sig/ont/fma/fma66768 |
| T229 | 3407-3411 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T230 | 3848-3853 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
| T231 | 3868-3871 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T232 | 3880-3883 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T233 | 3893-3898 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
| T234 | 4040-4045 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
| T235 | 4077-4100 | Body_part | denotes | lower respiratory tract | http://purl.org/sig/ont/fma/fma45662 |
| T236 | 4129-4134 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
| T237 | 4235-4245 | Body_part | denotes | Intestinal | http://purl.org/sig/ont/fma/fma7199 |
| T238 | 4246-4262 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
| T239 | 4257-4262 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T240 | 5361-5367 | Body_part | denotes | saliva | http://purl.org/sig/ont/fma/fma59862 |
| T241 | 5403-5409 | Body_part | denotes | saliva | http://purl.org/sig/ont/fma/fma59862 |
| T242 | 5418-5421 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T243 | 5431-5436 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
| T244 | 5493-5501 | Body_part | denotes | monocyte | http://purl.org/sig/ont/fma/fma62864 |
| T245 | 5510-5513 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T246 | 5523-5528 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
| T247 | 5726-5731 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
| T248 | 5732-5735 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T249 | 6123-6128 | Body_part | denotes | stool | http://purl.org/sig/ont/fma/fma64183 |
| T250 | 6292-6299 | Body_part | denotes | alanine | http://purl.org/sig/ont/fma/fma82749 |
| T251 | 6356-6361 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T252 | 6410-6432 | Body_part | denotes | gastrointestinal tract | http://purl.org/sig/ont/fma/fma71132 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T121 | 1473-1478 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T122 | 1535-1540 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T123 | 1572-1577 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T124 | 1861-1871 | Body_part | denotes | intestines | http://purl.obolibrary.org/obo/UBERON_0000160 |
| T125 | 1912-1927 | Body_part | denotes | small intestine | http://purl.obolibrary.org/obo/UBERON_0002108 |
| T126 | 1918-1927 | Body_part | denotes | intestine | http://purl.obolibrary.org/obo/UBERON_0000160 |
| T127 | 2040-2046 | Body_part | denotes | mucosa | http://purl.obolibrary.org/obo/UBERON_0000344 |
| T128 | 2103-2118 | Body_part | denotes | Lymphoid tissue | http://purl.obolibrary.org/obo/UBERON_0001744 |
| T129 | 2112-2118 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T130 | 3848-3853 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T131 | 3893-3898 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T132 | 4040-4045 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T133 | 4077-4100 | Body_part | denotes | lower respiratory tract | http://purl.obolibrary.org/obo/UBERON_0001558 |
| T134 | 4083-4100 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
| T135 | 4129-4134 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T136 | 5266-5271 | Body_part | denotes | Vomit | http://purl.obolibrary.org/obo/UBERON_0000172 |
| T137 | 5361-5367 | Body_part | denotes | saliva | http://purl.obolibrary.org/obo/UBERON_0001836 |
| T138 | 5403-5409 | Body_part | denotes | saliva | http://purl.obolibrary.org/obo/UBERON_0001836 |
| T139 | 5431-5436 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T140 | 5523-5528 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T141 | 5726-5731 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T142 | 6123-6128 | Body_part | denotes | stool | http://purl.obolibrary.org/obo/UBERON_0001988 |
| T143 | 6356-6361 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T270 | 43-51 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T271 | 66-74 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T272 | 76-80 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T273 | 608-616 | Disease | denotes | Diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T274 | 684-692 | Disease | denotes | Diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T275 | 746-754 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T276 | 894-902 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T277 | 1055-1063 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T278 | 1183-1191 | Disease | denotes | Diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T279 | 1256-1264 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T280 | 1349-1357 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T281 | 1376-1384 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T282 | 1987-1993 | Disease | denotes | ulcers | http://purl.obolibrary.org/obo/MONDO_0043839 |
| T283 | 2138-2146 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T284 | 2340-2348 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T285 | 2748-2757 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T286 | 2882-2892 | Disease | denotes | infections | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T287 | 3113-3121 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T288 | 3549-3557 | Disease | denotes | Diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T289 | 3676-3685 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T290 | 3695-3726 | Disease | denotes | Healthcare associated infection | http://purl.obolibrary.org/obo/MONDO_0043544 |
| T291 | 3717-3726 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T292 | 3736-3739 | Disease | denotes | HAI | http://purl.obolibrary.org/obo/MONDO_0043544 |
| T293 | 3790-3798 | Disease | denotes | Diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T294 | 4313-4322 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T295 | 4393-4401 | Disease | denotes | Diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T296 | 4461-4469 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T297 | 4901-4909 | Disease | denotes | Diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T298 | 4978-4986 | Disease | denotes | Diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T299 | 5020-5028 | Disease | denotes | Diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T300 | 5164-5172 | Disease | denotes | Diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T301 | 5257-5265 | Disease | denotes | Diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
| T302 | 6434-6437 | Disease | denotes | HAI | http://purl.obolibrary.org/obo/MONDO_0043544 |
| T303 | 6439-6470 | Disease | denotes | healthcare associated infection | http://purl.obolibrary.org/obo/MONDO_0043544 |
| T304 | 6461-6470 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T305 | 6472-6475 | Disease | denotes | HAI | http://purl.obolibrary.org/obo/MONDO_0043544 |
| T306 | 6477-6508 | Disease | denotes | healthcare associated infection | http://purl.obolibrary.org/obo/MONDO_0043544 |
| T307 | 6499-6508 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T308 | 6566-6570 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T309 | 6576-6609 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T390 | 694-696 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T391 | 756-763 | http://purl.obolibrary.org/obo/CLO_0001471 | denotes | 73%) (1 |
| T392 | 1221-1224 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 2/7 |
| T393 | 1458-1459 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T394 | 1630-1632 | http://purl.obolibrary.org/obo/CLO_0053794 | denotes | 41 |
| T395 | 1637-1638 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T396 | 1722-1723 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T397 | 1726-1727 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T398 | 1730-1731 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T399 | 1769-1779 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
| T400 | 1780-1785 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T401 | 1833-1839 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | active |
| T402 | 1861-1871 | http://purl.obolibrary.org/obo/UBERON_0000160 | denotes | intestines |
| T403 | 1861-1871 | http://www.ebi.ac.uk/efo/EFO_0000834 | denotes | intestines |
| T404 | 1890-1895 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T405 | 1912-1927 | http://purl.obolibrary.org/obo/UBERON_0002108 | denotes | small intestine |
| T406 | 1930-1931 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T407 | 2040-2046 | http://purl.obolibrary.org/obo/UBERON_0000344 | denotes | mucosa |
| T408 | 2103-2118 | http://purl.obolibrary.org/obo/UBERON_0001744 | denotes | Lymphoid tissue |
| T409 | 2169-2179 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
| T410 | 2180-2185 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T411 | 2214-2215 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T412 | 2697-2704 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T413 | 2761-2766 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T414 | 3379-3384 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | Human |
| T415 | 3385-3395 | http://purl.obolibrary.org/obo/UBERON_0000160 | denotes | intestinal |
| T416 | 3385-3395 | http://www.ebi.ac.uk/efo/EFO_0000834 | denotes | intestinal |
| T417 | 3396-3406 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
| T418 | 3407-3411 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T419 | 3639-3640 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T420 | 3769-3770 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T421 | 3838-3839 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T422 | 3874-3875 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T423 | 3878-3879 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T424 | 4077-4100 | http://purl.obolibrary.org/obo/UBERON_0001558 | denotes | lower respiratory tract |
| T425 | 4103-4108 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | Virus |
| T426 | 4235-4245 | http://purl.obolibrary.org/obo/UBERON_0000160 | denotes | Intestinal |
| T427 | 4235-4245 | http://www.ebi.ac.uk/efo/EFO_0000834 | denotes | Intestinal |
| T428 | 4246-4256 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
| T429 | 4257-4262 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T430 | 4741-4744 | http://purl.obolibrary.org/obo/NCBITaxon_9596 | denotes | Pan |
| T431 | 5181-5183 | http://purl.obolibrary.org/obo/CLO_0001302 | denotes | 34 |
| T432 | 5325-5326 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T433 | 5329-5330 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T434 | 5378-5383 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | Virus |
| T435 | 5493-5501 | http://purl.obolibrary.org/obo/CL_0000576 | denotes | monocyte |
| T436 | 6356-6361 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T437 | 6397-6403 | http://purl.obolibrary.org/obo/UBERON_0003100 | denotes | female |
| T438 | 6410-6432 | http://purl.obolibrary.org/obo/UBERON_0005409 | denotes | gastrointestinal tract |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T126 | 993-995 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T127 | 1206-1208 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T128 | 1737-1739 | Chemical | denotes | EM | http://purl.obolibrary.org/obo/CHEBI_73507 |
| T129 | 1997-1999 | Chemical | denotes | TI | http://purl.obolibrary.org/obo/CHEBI_141446 |
| T130 | 2247-2249 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T131 | 2276-2278 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T132 | 2393-2395 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T133 | 2498-2500 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T134 | 2524-2532 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T135 | 2536-2542 | Chemical | denotes | toxins | http://purl.obolibrary.org/obo/CHEBI_27026 |
| T136 | 2707-2709 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T137 | 2770-2780 | Chemical | denotes | antibiotic | http://purl.obolibrary.org/obo/CHEBI_33281 |
| T138 | 2791-2793 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T139 | 2893-2895 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T140 | 3018-3020 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T141 | 3460-3462 | Chemical | denotes | Al | http://purl.obolibrary.org/obo/CHEBI_28984 |
| T142 | 3641-3643 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T143 | 3940-3942 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T144 | 3983-3985 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T145 | 4177-4179 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T146 | 5056-5058 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T147 | 5081-5083 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T148 | 5149-5151 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T149 | 5485-5488 | Chemical | denotes | AST | http://purl.obolibrary.org/obo/CHEBI_76649 |
| T150 | 5490-5492 | Chemical | denotes | PT | http://purl.obolibrary.org/obo/CHEBI_141395 |
| T151 | 5656-5658 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T152 | 5694-5696 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T153 | 5793-5795 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T154 | 5871-5873 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T155 | 5933-5935 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T156 | 5964-5975 | Chemical | denotes | antibiotics | http://purl.obolibrary.org/obo/CHEBI_33281 |
| T157 | 6017-6019 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T158 | 6091-6093 | Chemical | denotes | GI | http://purl.obolibrary.org/obo/CHEBI_73907 |
| T159 | 6292-6299 | Chemical | denotes | alanine | http://purl.obolibrary.org/obo/CHEBI_16449 |
| T160 | 6318-6321 | Chemical | denotes | AST | http://purl.obolibrary.org/obo/CHEBI_76649 |
| T161 | 6323-6332 | Chemical | denotes | aspartate | http://purl.obolibrary.org/obo/CHEBI_132943|http://purl.obolibrary.org/obo/CHEBI_29995|http://purl.obolibrary.org/obo/CHEBI_72314 |
| T164 | 6369-6371 | Chemical | denotes | EM | http://purl.obolibrary.org/obo/CHEBI_73507 |
| T165 | 6373-6381 | Chemical | denotes | electron | http://purl.obolibrary.org/obo/CHEBI_10545 |
| T166 | 6623-6625 | Chemical | denotes | TI | http://purl.obolibrary.org/obo/CHEBI_141446 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T40 | 1833-1857 | http://purl.obolibrary.org/obo/GO_1903902 | denotes | active viral replication |
| T41 | 1840-1857 | http://purl.obolibrary.org/obo/GO_0019079 | denotes | viral replication |
| T42 | 1840-1857 | http://purl.obolibrary.org/obo/GO_0019058 | denotes | viral replication |
| T43 | 2559-2576 | http://purl.obolibrary.org/obo/GO_0019079 | denotes | viral replication |
| T44 | 2559-2576 | http://purl.obolibrary.org/obo/GO_0019058 | denotes | viral replication |
| T45 | 2687-2696 | http://purl.obolibrary.org/obo/GO_0046903 | denotes | secretion |
| T46 | 4277-4294 | http://purl.obolibrary.org/obo/GO_0019079 | denotes | viral replication |
| T47 | 4277-4294 | http://purl.obolibrary.org/obo/GO_0019058 | denotes | viral replication |
| T48 | 6158-6172 | http://purl.obolibrary.org/obo/GO_0019076 | denotes | viral shedding |
| T49 | 6242-6256 | http://purl.obolibrary.org/obo/GO_0019076 | denotes | viral shedding |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T214 | 608-616 | Phenotype | denotes | Diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T215 | 627-646 | Phenotype | denotes | Nausea and vomiting | http://purl.obolibrary.org/obo/HP_0002017 |
| T216 | 684-692 | Phenotype | denotes | Diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T217 | 701-709 | Phenotype | denotes | Vomiting | http://purl.obolibrary.org/obo/HP_0002013 |
| T218 | 718-732 | Phenotype | denotes | Abdominal pain | http://purl.obolibrary.org/obo/HP_0002027 |
| T219 | 746-754 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T220 | 894-902 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T221 | 1055-1063 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T222 | 1167-1175 | Phenotype | denotes | Vomiting | http://purl.obolibrary.org/obo/HP_0002013 |
| T223 | 1183-1191 | Phenotype | denotes | Diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T224 | 1206-1219 | Phenotype | denotes | GI hemorrhage | http://purl.obolibrary.org/obo/HP_0002239 |
| T225 | 1228-1240 | Phenotype | denotes | Hematochezia | http://purl.obolibrary.org/obo/HP_0002573 |
| T226 | 1256-1264 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T227 | 1295-1300 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T228 | 1349-1357 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T229 | 1376-1384 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T230 | 2333-2338 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T231 | 2340-2348 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T232 | 2868-2892 | Phenotype | denotes | Opportunistic infections | http://purl.obolibrary.org/obo/HP_0031690 |
| T233 | 3113-3121 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T234 | 3549-3557 | Phenotype | denotes | Diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T235 | 3566-3572 | Phenotype | denotes | Nausea | http://purl.obolibrary.org/obo/HP_0002018 |
| T236 | 3581-3589 | Phenotype | denotes | Vomiting | http://purl.obolibrary.org/obo/HP_0002013 |
| T237 | 3598-3612 | Phenotype | denotes | Abdominal pain | http://purl.obolibrary.org/obo/HP_0002027 |
| T238 | 3773-3781 | Phenotype | denotes | Vomiting | http://purl.obolibrary.org/obo/HP_0002013 |
| T239 | 3790-3798 | Phenotype | denotes | Diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T240 | 4393-4401 | Phenotype | denotes | Diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T241 | 4883-4891 | Phenotype | denotes | Anorexia | http://purl.obolibrary.org/obo/HP_0002039 |
| T242 | 4901-4909 | Phenotype | denotes | Diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T243 | 4919-4925 | Phenotype | denotes | Nausea | http://purl.obolibrary.org/obo/HP_0002018 |
| T244 | 4936-4944 | Phenotype | denotes | Vomiting | http://purl.obolibrary.org/obo/HP_0002013 |
| T245 | 4954-4968 | Phenotype | denotes | Abdominal pain | http://purl.obolibrary.org/obo/HP_0002027 |
| T246 | 4978-4986 | Phenotype | denotes | Diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T247 | 4996-5014 | Phenotype | denotes | Nausea or vomiting | http://purl.obolibrary.org/obo/HP_0002017 |
| T248 | 5020-5028 | Phenotype | denotes | Diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T249 | 5164-5172 | Phenotype | denotes | Diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T250 | 5203-5211 | Phenotype | denotes | Vomiting | http://purl.obolibrary.org/obo/HP_0002013 |
| T251 | 5228-5242 | Phenotype | denotes | Abdominal pain | http://purl.obolibrary.org/obo/HP_0002027 |
| T252 | 5257-5265 | Phenotype | denotes | Diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |
| T253 | 5606-5614 | Phenotype | denotes | anorexia | http://purl.obolibrary.org/obo/HP_0002039 |
| T254 | 5619-5633 | Phenotype | denotes | abdominal pain | http://purl.obolibrary.org/obo/HP_0002027 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T385 | 0-75 | Sentence | denotes | Table 4 Gastrointestinal manifestations of SARS-CoV, MERS-CoV and COVID-19. |
| T386 | 76-132 | Sentence | denotes | SARS (only studies with large study population included) |
| T387 | 133-587 | Sentence | denotes | Study Lee et al (2003)N = 138, suspectedRetrospective study Donnelly et al (2003)N = 1425, confirmed casesRetrospective study Peiris et al (2003)N = 75, confirmed casesProspective study Leung et al (2003)N = 138, confirmed casesRetrospective study Choi et al (2003)N = 267 (227 confirmed cases)Retrospective study Shi et al (2005)N = 14, (7 confirmed cases, 7 suspected)Clinicopathologic study Kwan et al (2005)N = 240, confirmed casesRetrospective Study |
| T388 | 588-624 | Sentence | denotes | Clinical Features • Diarrhea (19.6%) |
| T389 | 625-681 | Sentence | denotes | • Nausea and vomiting (19.6%) • Loss of appetite (54.6%) |
| T390 | 682-698 | Sentence | denotes | • Diarrhea (27%) |
| T391 | 699-715 | Sentence | denotes | • Vomiting (14%) |
| T392 | 716-811 | Sentence | denotes | • Abdominal pain (13%) Watery diarrhea (73%) (1% on admission)• 7.5 ± 2.3 days of symptom onset |
| T393 | 812-837 | Sentence | denotes | • frequency 6.3 ± 3.5/day |
| T394 | 838-971 | Sentence | denotes | • Peak 8.7 ± 2.3 days, improved in all by day 13 Watery diarrhea (38.4 % within first week, 20.3% on presentation)• Average duration: |
| T395 | 972-980 | Sentence | denotes | 3.7 ±2.7 |
| T396 | 981-1045 | Sentence | denotes | • 5.8% only GI symptoms on presentation • Loss of appetite (23%) |
| T397 | 1046-1164 | Sentence | denotes | • Watery diarrhea (15% on admission, increased to 53% after hospitalization, median 3 days after) (frequency 3-20/day) |
| T398 | 1165-1197 | Sentence | denotes | • Vomiting (7%) • Diarrhea (1/7) |
| T399 | 1198-1225 | Sentence | denotes | • Upper GI hemorrhage (2/7) |
| T400 | 1226-1272 | Sentence | denotes | • Hematochezia (1/7) • Watery diarrhea (20.4%) |
| T401 | 1273-1306 | Sentence | denotes | • 7.5 ±2.8 days after fever onset |
| T402 | 1307-1322 | Sentence | denotes | • (Peak day 12) |
| T403 | 1323-1328 | Sentence | denotes | • OR: |
| T404 | 1329-1397 | Sentence | denotes | 3 for patients with diarrhea to have continued diarrhea on follow up |
| T405 | 1398-1704 | Sentence | denotes | Key findings on investigations • ↑ baseline albumin• ↓ K+ N/A Viral RNA in stool (97%) (14.4 ± 2.2 days from onset) • ↓ K+• Viral RNA in stool (16%)• No viral isolation from stool• Colonoscopy (1) grossly within normal limits ↓ K+ (41%) N/A K+ nadir lower in diarrheal patients than nondiarrheal (P < 0.05) |
| T406 | 1705-1871 | Sentence | denotes | Histopathology N/A N/A N/A • On EM, viral particles detected in epithelial cells of bowel within ER, and in surface microvilli, active viral replication in intestines |
| T407 | 1872-1952 | Sentence | denotes | • Able to isolate virus by culture from small intestine N/A • Diarrheal patient: |
| T408 | 1953-2046 | Sentence | denotes | Pseudomembranous plaques, shallow ulcers in TI, scattered hemorrhagic spots in gastric mucosa |
| T409 | 2047-2100 | Sentence | denotes | • Patients with bleeding: coffee ground liquid in GIT |
| T410 | 2101-2135 | Sentence | denotes | • Lymphoid tissue depletion in all |
| T411 | 2136-2215 | Sentence | denotes | • SARS-CoV particles detected in epithelial cells in diarrheal patient only N/A |
| T412 | 2216-2495 | Sentence | denotes | Key study findings and message GI symptoms were less common GI symptoms less common at presentation 21%: concomitant fever, diarrhea, and radiological worsening • Patients with GI symptoms had higher ICU admission (P < 0.001, higher requirement of ventilatory support (P = 0.004) |
| T413 | 2496-2704 | Sentence | denotes | • GI symptoms may be due to proteins or toxins produced during viral replication • Diarrheal patients had nonstatistically significant higher rates of positive serological and nasopharyngeal secretion testing |
| T414 | 2705-2838 | Sentence | denotes | • GI symptoms may be due to direct enteric infection by virus or antibiotic treatment GI symptoms may be due to:• Acute immune damage |
| T415 | 2839-2865 | Sentence | denotes | • Via infected lymphocytes |
| T416 | 2866-2943 | Sentence | denotes | • Opportunistic infections GI symptoms more common in:• F>M (6:1) (P < 0.001) |
| T417 | 2944-3001 | Sentence | denotes | • Geographical (Amoy Gardens Estate residents) (P = 0.01) |
| T418 | 3002-3088 | Sentence | denotes | • Patients with GI symptoms had lower mortality and ventilator requirement (P < 0.005) |
| T419 | 3089-3154 | Sentence | denotes | • CXR scores at peak of diarrhea did not correlate with frequency |
| T420 | 3155-3159 | Sentence | denotes | MERS |
| T421 | 3160-3528 | Sentence | denotes | Study Assiri et al (2013)N = 47, confirmed casesRetrospective study Corman et al (2015)N = 37, confirmed casesClinicopathologic study Alenazi et al (2017)N = 130, confirmed casesClinicopathologic study Zhou et al (2017)Human intestinal epithelial cell culture, hDDP4 transgenic miceClinicopathologic Al-Abdley et al (2019)N = 33, confirmed casesClinicopathologic study |
| T422 | 3529-3563 | Sentence | denotes | Clinical features • Diarrhea (26%) |
| T423 | 3564-3578 | Sentence | denotes | • Nausea (21%) |
| T424 | 3579-3595 | Sentence | denotes | • Vomiting (21%) |
| T425 | 3596-3618 | Sentence | denotes | • Abdominal pain (17%) |
| T426 | 3619-3686 | Sentence | denotes | (at presentation) N/A GI symptoms in• Community acquired infection: |
| T427 | 3687-3692 | Sentence | denotes | 46.2% |
| T428 | 3693-3727 | Sentence | denotes | • Healthcare associated infection: |
| T429 | 3728-3733 | Sentence | denotes | 46.6% |
| T430 | 3734-3762 | Sentence | denotes | • HAI in healthcare workers: |
| T431 | 3763-3787 | Sentence | denotes | 16% N/A • Vomiting (31%) |
| T432 | 3788-3804 | Sentence | denotes | • Diarrhea (15%) |
| T433 | 3805-3951 | Sentence | denotes | Key findings on investigations N/A • 14.6% stool yielded viral RNA N/A N/A RNA positive stool (57%) did not correlate with presence of GI symptoms |
| T434 | 3952-4100 | Sentence | denotes | Key study findings and message GI symptoms are frequent at presentation • Viral load in stool is significantly lower than in lower respiratory tract |
| T435 | 4101-4232 | Sentence | denotes | • Virus not cultivable from stool MERS-CoV high in healthcare environment • GI symptoms among the commonest extrapulmonary symptoms |
| T436 | 4233-4294 | Sentence | denotes | • Intestinal epithelial cells could support viral replication |
| T437 | 4295-4460 | Sentence | denotes | • Primary gastric infection can lead to respiratory symptoms via hematogenous or lymphatic spread Diarrhea may be associated with prolonged viral detection (p 0.069) |
| T438 | 4461-4469 | Sentence | denotes | COVID-19 |
| T439 | 4470-4862 | Sentence | denotes | Study Wang et al (2020)N = 138, confirmed casesClinicopathologic study Guan et al (2020)N = 1099, confirmed casesRetrospective study To et al (2020)N = 12, suspected casesClinicopathologic study Xie et al (2020)N = 19 suspected (9 confirmed cases)Clinicopathologic study Pan et al (2020)N = 204, confirmed casesRetrospective study Wu et al (2020)N = 74, confirmed casesClinicopathologic study |
| T440 | 4863-4898 | Sentence | denotes | Clinical features • Anorexia (39.9) |
| T441 | 4899-4916 | Sentence | denotes | • Diarrhea (10.1) |
| T442 | 4917-4933 | Sentence | denotes | • Nausea (10.1%) |
| T443 | 4934-4951 | Sentence | denotes | • Vomiting (3.6%) |
| T444 | 4952-4993 | Sentence | denotes | • Abdominal pain (2.2%) • Diarrhea (3.8%) |
| T445 | 4994-5067 | Sentence | denotes | • Nausea or vomiting (5%) Diarrhea (11.1% of confirmed) • Any GI symptom: |
| T446 | 5068-5073 | Sentence | denotes | 50.5% |
| T447 | 5074-5093 | Sentence | denotes | • Only GI symptoms: |
| T448 | 5094-5099 | Sentence | denotes | 0.03% |
| T449 | 5100-5161 | Sentence | denotes | • Loss of appetite (39.7% of total, 78.6% of all GI symptoms) |
| T450 | 5162-5200 | Sentence | denotes | • Diarrhea (17.1%, 34%, usually 3/day) |
| T451 | 5201-5225 | Sentence | denotes | • Vomiting (0.02%, 3.9%) |
| T452 | 5226-5291 | Sentence | denotes | • Abdominal pain (0.01%, 1.9%) Diarrhea/Vomit/Stomachache (44.6%) |
| T453 | 5292-5375 | Sentence | denotes | Key findings on investigations N/A N/A • 2019-nCoV detected in 91.7% saliva samples |
| T454 | 5376-5445 | Sentence | denotes | • Virus cultured from 3/12 saliva samples RNA positive stool samples: |
| T455 | 5446-5537 | Sentence | denotes | 88.9% of confirmed (overall 42%) ↑ALT, AST↑ PT↓monocyte count • RNA positive stool samples: |
| T456 | 5538-5541 | Sentence | denotes | 55% |
| T457 | 5542-5746 | Sentence | denotes | Key study findings and message ICU patients more likely to have anorexia and abdominal pain (P < 0.001, P = 0.02) GI symptoms less common • Presence of GI symptoms not associated with stool RNA positivity |
| T458 | 5747-5868 | Sentence | denotes | • Fecal transmission possible • Patients with GI symptoms had longer interval from symptom onset to admission (P = 0.013) |
| T459 | 5869-5916 | Sentence | denotes | • GI symptoms worsened with severity of disease |
| T460 | 5917-5987 | Sentence | denotes | • Patients with GI symptoms more likely to get antibiotics (P = 0.018) |
| T461 | 5988-6139 | Sentence | denotes | • No association presence of GI symptoms with total hospital stay, ICU days or mortality • Presence of GI symptoms not associated with stool positivity |
| T462 | 6140-6186 | Sentence | denotes | • Prolonged fecal viral shedding up to 5 weeks |
| T463 | 6187-6256 | Sentence | denotes | • Disease severity not associated with prolonged fecal viral shedding |
| T464 | 6257-6286 | Sentence | denotes | • Fecal transmission possible |
| T465 | 6287-6643 | Sentence | denotes | ALT, alanine aminotransferase; AST, aspartate aminotransferase; CXR, chest x-ray; EM, electron microscopy; F, female; GIT, gastrointestinal tract; HAI, healthcare associated infection; HAI, healthcare associated infection; MERS-CoV, middle east respiratory syndrome coronavirus; SARS-COV, severe acute respiratory syndrome coronavirus; TI, terminal ileumx. |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1050 | 76-81 | UBERON:0000062 | denotes | SARS |
| T1051 | 98-105 | NCBITaxon:9443 | denotes | h large |
| T1052 | 226-231 | UBERON:0002113 | denotes | nfirm |
| T1053 | 264-269 | UBERON:0002113 | denotes | s et |
| T1054 | 337-342 | UBERON:0002113 | denotes | N = 1 |
| T1055 | 407-411 | PR:000007489 | denotes | 227 |
| T1056 | 412-422 | GO:0010467 | denotes | onfirmed c |
| T1057 | 435-442 | UBERON:0002113 | denotes | ctive s |
| T1058 | 455-462 | NCBITaxon:33208 | denotes | l (2005 |
| T1059 | 463-470 | CL:0002257;UBERON:0003914 | denotes | N = 14, |
| T1060 | 471-480 | UBERON:0003914;CL:0000066 | denotes | (7 confir |
| T1061 | 481-485 | CL:0000066 | denotes | ed c |
| T1062 | 585-600 | UBERON:0004134 | denotes | dy Clinical Fea |
| T1063 | 601-610 | UBERON:0004134;CL:0000066 | denotes | ures • Di |
| T1064 | 611-619 | CL:0000066 | denotes | rrhea (1 |
| T1065 | 654-659 | UBERON:0004134 | denotes | • Lo |
| T1066 | 731-744 | GO:0065007 | denotes | n (13%) Water |
| T1067 | 752-757 | NCBITaxon:10239 | denotes | ea (7 |
| T1068 | 767-781 | UBERON:0002405 | denotes | admission)• 7 |
| T1069 | 782-788 | UBERON:0002113 | denotes | 5 ± 2. |
| T1070 | 975-983 | SP_9 | denotes | ±2.7 • |
| T1071 | 992-1001 | GO:0006915 | denotes | GI sympt |
| T1072 | 1006-1021 | GO:0010628 | denotes | n presentation |
| T1073 | 1022-1027 | PR:000000374 | denotes | Loss |
| T1074 | 1032-1036 | PR:000007489 | denotes | ppet |
| T1075 | 1064-1076 | UBERON:0002113 | denotes | (15% on admi |
| T1076 | 1419-1424 | UBERON:0002113 | denotes | tigat |
| T1077 | 1469-1474 | UBERON:0002113 | denotes | in s |
| T1078 | 1604-1608 | CHEBI:16199;CHEBI:16199 | denotes | ithi |
| T1079 | 1672-1677 | NCBITaxon:10239 | denotes | nts t |
| T1080 | 1691-1696 | UBERON:0001088 | denotes | al (P |
| T1081 | 1723-1727 | CHEBI:16199;CHEBI:16199 | denotes | N/A |
| T1082 | 1795-1802 | CHEBI:33695;CHEBI:33695;SO:0000673 | denotes | within |
| T1083 | 1874-1878 | CHEBI:16199;CHEBI:16199 | denotes | Able |
| T1084 | 2040-2046 | GO:0016265 | denotes | mucosa |
| T1085 | 2166-2172 | GO:0016265 | denotes | in epi |
| T1086 | 2221-2225 | CHEBI:16199;CHEBI:16199 | denotes | tudy |
| T2380 | 2283-2288 | UBERON:0002113 | denotes | toms |
| T58032 | 2319-2324 | NCBITaxon:10239 | denotes | : con |
| T1089 | 2333-2338 | UBERON:0002405 | denotes | fever |
| T81309 | 2349-2354 | NCBITaxon:10239 | denotes | and |
| T1091 | 2390-2395 | NCBITaxon:10239 | denotes | th GI |
| T1092 | 2492-2497 | GO:0016265 | denotes | 04) • |
| T63007 | 2561-2565 | PR:000003622;G_3;PG_10 | denotes | ral |
| T8365 | 2567-2598 | PR:000003622;PG_10 | denotes | plication • Diarrheal patients |
| T1095 | 2611-2617 | UBERON:0002113 | denotes | ticall |
| T1096 | 2637-2642 | UBERON:0002113 | denotes | rate |
| T1097 | 2657-2662 | UBERON:0000178 | denotes | erolo |
| T1098 | 2663-2667 | CHEBI:16199;CHEBI:16199 | denotes | ical |
| T1099 | 2691-2697 | UBERON:0002113 | denotes | etion |
| T1100 | 2801-2808 | CHEBI:24996;CHEBI:24996 | denotes | s may b |
| T1101 | 2824-2833 | SP_9 | denotes | immune d |
| T39729 | 2835-2846 | SP_9 | denotes | age • Via i |
| T1103 | 2847-2857 | SP_9;UBERON:0001004 | denotes | fected lym |
| T73744 | 2858-2878 | SP_9 | denotes | hocytes • Opportunis |
| T76920 | 2880-2888 | SP_10 | denotes | c infect |
| T59051 | 2890-2902 | SP_10 | denotes | ns GI sympto |
| T1107 | 2903-2913 | SP_10;UBERON:0001004 | denotes | s more com |
| T22519 | 2914-2934 | SP_10 | denotes | on in:• F>M (6:1) (P |
| T1109 | 2971-2976 | UBERON:0002113 | denotes | s Est |
| T1110 | 2995-3003 | SP_10 | denotes | 0.01) • |
| T1111 | 3005-3013 | SP_9 | denotes | atients |
| T1112 | 3018-3026 | SP_7 | denotes | GI sympt |
| T1113 | 3039-3043 | CHEBI:16199;CHEBI:16199 | denotes | mor |
| T1114 | 3047-3051 | CHEBI:29108;CHEBI:29108 | denotes | ty a |
| T1115 | 3061-3063 | CHEBI:29103;CHEBI:29103 | denotes | to |
| T1116 | 3073-3075 | CHEBI:18420;CHEBI:18420 | denotes | en |
| T1117 | 3075-3077 | CHEBI:62964;CHEBI:62964 | denotes | t |
| T1118 | 3136-3141 | UBERON:0001088 | denotes | ate w |
| T1119 | 3269-3274 | UBERON:0000948 | denotes | sClin |
| T1120 | 3297-3302 | UBERON:0002113 | denotes | nazi |
| T1121 | 3330-3335 | UBERON:0002113 | denotes | ed ca |
| T1122 | 3358-3372 | GO:0042052 | denotes | udy Zhou et al |
| T1123 | 3718-3723 | UBERON:0002113 | denotes | nfect |
| T1124 | 3740-3749 | UBERON:0000062 | denotes | in health |
| T1125 | 3777-3782 | NCBITaxon:10239 | denotes | ting |
| T1126 | 3813-3818 | UBERON:0002113 | denotes | ings |
| T1127 | 3879-3884 | UBERON:0002113 | denotes | RNA |
| T1128 | 3915-3922 | CL:0002257;UBERON:0003914 | denotes | rrelate |
| T1129 | 3923-3932 | UBERON:0000483;CL:0000066 | denotes | with pres |
| T1130 | 3933-3937 | CL:0000066 | denotes | nce |
| T1131 | 4041-4056 | UBERON:0004134 | denotes | tool is signifi |
| T1132 | 4057-4066 | UBERON:0003914;CL:0000066 | denotes | antly low |
| T1133 | 4067-4072 | CL:0000066 | denotes | r tha |
| T1134 | 4084-4098 | GO:0065007 | denotes | espiratory tra |
| T1135 | 4108-4113 | NCBITaxon:10239;GO:0042148 | denotes | not |
| T1136 | 4114-4122 | GO:0042148 | denotes | ultivabl |
| T1137 | 4125-4134 | UBERON:0002405 | denotes | rom stool |
| T1138 | 4317-4322 | UBERON:0002113 | denotes | ction |
| T1139 | 4372-4377 | UBERON:0002113 | denotes | or l |
| T1140 | 4480-4484 | CHEBI:16199;CHEBI:16199 | denotes | et |
| T1141 | 4569-4573 | CHEBI:16199;CHEBI:16199 | denotes | onfi |
| T1142 | 4694-4698 | CHEBI:16199;CHEBI:16199 | denotes | ted |
| T1143 | 4864-4869 | GO:0016265 | denotes | linic |
| T1144 | 4992-4997 | GO:0016265 | denotes | ) • N |
| T1145 | 5046-5050 | CHEBI:16199;CHEBI:16199 | denotes | ed) |
| T1146 | 5110-5115 | UBERON:0002113 | denotes | appet |
| T1147 | 5146-5151 | NCBITaxon:10239 | denotes | ll GI |
| T1148 | 5160-5165 | UBERON:0002405 | denotes | ) • D |
| T1149 | 5176-5181 | NCBITaxon:10239 | denotes | .1%, |
| T1150 | 5249-5254 | GO:0016265 | denotes | , 1.9 |
| T1151 | 5321-5325 | G_3;PG_10;PR:000003622 | denotes | s N/ |
| T1152 | 5327-5358 | PG_10;PR:000003622 | denotes | N/A • 2019-nCoV detected in 91. |
| T1153 | 5371-5377 | UBERON:0002113 | denotes | ples • |
| T1154 | 5397-5402 | UBERON:0002113 | denotes | 3/12 |
| T1155 | 5417-5422 | UBERON:0000178 | denotes | RNA |
| T1156 | 5423-5427 | CHEBI:16199;CHEBI:16199 | denotes | osit |
| T1157 | 5451-5457 | UBERON:0002113 | denotes | of co |
| T1158 | 5500-5510 | CHEBI:16737;CHEBI:16737 | denotes | e count • |
| T1159 | 5561-5568 | CHEBI:24996;CHEBI:24996 | denotes | and mes |
| T1160 | 5584-5592 | SP_9 | denotes | s more l |
| T1161 | 5594-5638 | SP_9 | denotes | ely to have anorexia and abdominal pain (P < |
| T1162 | 5640-5648 | SP_10 | denotes | .001, P |
| T1163 | 5650-5662 | SP_10 | denotes | 0.02) GI sym |
| T1164 | 5663-5673 | SP_10;UBERON:0001004 | denotes | toms less |
| T1165 | 5674-5694 | SP_10 | denotes | ommon • Presence of |
| T1166 | 5721-5727 | UBERON:0000970 | denotes | with s |
| T1167 | 5790-5798 | SP_10 | denotes | th GI sy |
| T1168 | 5837-5842 | UBERON:0001827 | denotes | onse |
| T1169 | 5915-5923 | SP_10 | denotes | e • Pati |
| T1170 | 5981-5989 | SP_10 | denotes | 0.018) • |
| T1171 | 6011-6016 | UBERON:0001827 | denotes | ce of |
| T1172 | 6030-6038 | SP_9 | denotes | ith tota |
| T1173 | 6039-6048 | SP_9 | denotes | hospital |
| T1174 | 6073-6096 | UBERON:0000010 | denotes | ity • Presence of GI sy |
| T1175 | 6112-6124 | UBERON:0001016 | denotes | iated with s |
| T1176 | 6298-6310 | UBERON:0001016 | denotes | e aminotrans |
| T1177 | 6344-6352 | SP_9 | denotes | erase; C |
| T1178 | 6491-6496 | NCBITaxon:10239 | denotes | ociat |
| T1179 | 6509-6513 | CHEBI:27026;CHEBI:27026 | denotes | MER |
| T1180 | 6592-6608 | UBERON:0002037 | denotes | piratory syndrom |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 959 | 5485-5488 | Gene | denotes | AST | Gene:26503 |
| 960 | 5694-5696 | Gene | denotes | GI | Gene:2770 |
| 961 | 6091-6093 | Gene | denotes | GI | Gene:2770 |
| 962 | 6017-6019 | Gene | denotes | GI | Gene:2770 |
| 963 | 5933-5935 | Gene | denotes | GI | Gene:2770 |
| 964 | 5871-5873 | Gene | denotes | GI | Gene:2770 |
| 965 | 5793-5795 | Gene | denotes | GI | Gene:2770 |
| 966 | 5656-5658 | Gene | denotes | GI | Gene:2770 |
| 967 | 5149-5151 | Gene | denotes | GI | Gene:2770 |
| 968 | 5081-5083 | Gene | denotes | GI | Gene:2770 |
| 969 | 5056-5058 | Gene | denotes | GI | Gene:2770 |
| 970 | 5333-5342 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 971 | 5577-5585 | Species | denotes | patients | Tax:9606 |
| 972 | 5779-5787 | Species | denotes | Patients | Tax:9606 |
| 973 | 4461-4469 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 974 | 4883-4925 | Disease | denotes | Anorexia (39.9) • Diarrhea (10.1) • Nausea | MESH:D009325 |
| 975 | 4936-4944 | Disease | denotes | Vomiting | MESH:D014839 |
| 976 | 4954-4968 | Disease | denotes | Abdominal pain | MESH:D015746 |
| 977 | 4978-4986 | Disease | denotes | Diarrhea | MESH:D003967 |
| 978 | 4996-5002 | Disease | denotes | Nausea | MESH:D009325 |
| 979 | 5006-5014 | Disease | denotes | vomiting | MESH:D014839 |
| 980 | 5020-5028 | Disease | denotes | Diarrhea | MESH:D003967 |
| 981 | 5102-5118 | Disease | denotes | Loss of appetite | MESH:D001068 |
| 982 | 5164-5172 | Disease | denotes | Diarrhea | MESH:D003967 |
| 983 | 5203-5211 | Disease | denotes | Vomiting | MESH:D014839 |
| 984 | 5228-5242 | Disease | denotes | Abdominal pain | MESH:D015746 |
| 985 | 5257-5265 | Disease | denotes | Diarrhea | MESH:D003967 |
| 986 | 5266-5283 | Disease | denotes | Vomit/Stomachache | MESH:D014839 |
| 987 | 5606-5614 | Disease | denotes | anorexia | MESH:D000855 |
| 988 | 5619-5633 | Disease | denotes | abdominal pain | MESH:D015746 |
| 989 | 6067-6076 | Disease | denotes | mortality | MESH:D003643 |
| 993 | 43-51 | Species | denotes | SARS-CoV | Tax:694009 |
| 994 | 53-61 | Species | denotes | MERS-CoV | Tax:1335626 |
| 995 | 66-74 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 1006 | 6292-6316 | Gene | denotes | alanine aminotransferase | Gene:2875 |
| 1007 | 6318-6321 | Gene | denotes | AST | Gene:26503 |
| 1008 | 6510-6518 | Species | denotes | MERS-CoV | Tax:1335626 |
| 1009 | 6520-6564 | Species | denotes | middle east respiratory syndrome coronavirus | Tax:1335626 |
| 1010 | 6566-6574 | Species | denotes | SARS-COV | Tax:694009 |
| 1011 | 6576-6621 | Species | denotes | severe acute respiratory syndrome coronavirus | Tax:694009 |
| 1012 | 6434-6437 | Disease | denotes | HAI | |
| 1013 | 6461-6470 | Disease | denotes | infection | MESH:D007239 |
| 1014 | 6472-6475 | Disease | denotes | HAI | |
| 1015 | 6499-6508 | Disease | denotes | infection | MESH:D007239 |