PMC:7212949 / 319-1197
Annnotations
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T4 | 72-80 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T5 | 97-106 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T6 | 233-242 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T7 | 248-256 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T8 | 273-306 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T9 | 320-328 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T10 | 411-419 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T11 | 497-506 | Disease | denotes | hepatitis | http://purl.obolibrary.org/obo/MONDO_0002251 |
| T12 | 508-527 | Disease | denotes | acute renal failure | http://purl.obolibrary.org/obo/MONDO_0002492 |
| T13 | 514-527 | Disease | denotes | renal failure | http://purl.obolibrary.org/obo/MONDO_0001106 |
| T14 | 529-541 | Disease | denotes | encephalitis | http://purl.obolibrary.org/obo/MONDO_0019956 |
| T15 | 543-551 | Disease | denotes | myositis | http://purl.obolibrary.org/obo/MONDO_0008054|http://purl.obolibrary.org/obo/MONDO_0021167 |
| T17 | 556-571 | Disease | denotes | gastroenteritis | http://purl.obolibrary.org/obo/MONDO_0002269 |
| T18 | 604-612 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T19 | 744-752 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 88-89 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 97-106 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T2 | 124-129 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T3 | 131-136 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T4 | 141-160 | Phenotype | denotes | shortness of breath | http://purl.obolibrary.org/obo/HP_0002098 |
| T5 | 233-242 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T6 | 497-506 | Phenotype | denotes | hepatitis | http://purl.obolibrary.org/obo/HP_0012115 |
| T7 | 508-527 | Phenotype | denotes | acute renal failure | http://purl.obolibrary.org/obo/HP_0001919 |
| T8 | 529-541 | Phenotype | denotes | encephalitis | http://purl.obolibrary.org/obo/HP_0002383 |
| T9 | 543-551 | Phenotype | denotes | myositis | http://purl.obolibrary.org/obo/HP_0100614 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 162-390 | Sentence | denotes | Similar coronavirus outbreaks have occurred in the past causing severe pneumonia like COVID-19, most recently, severe acute respiratory syndrome coronavirus (SARS-CoV) and middle east respiratory syndrome coronavirus (MERS-CoV). |
| T6 | 391-572 | Sentence | denotes | However, over time, SARS-CoV and MERS-CoV were shown to cause extrapulmonary signs and symptoms including hepatitis, acute renal failure, encephalitis, myositis and gastroenteritis. |
| T7 | 573-658 | Sentence | denotes | Similarly, sporadic reports of COVID-19 related extrapulmonary manifestations emerge. |
| T8 | 659-868 | Sentence | denotes | Unfortunately, there is no comprehensive summary of the multiorgan manifestations of COVID-19, making it difficult for clinicians to quickly educate themselves about this highly contagious and deadly pathogen. |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 63-69 | GO:0016265 | denotes | deaths |
| T7 | 72-80 | SP_7 | denotes | COVID-19 |
| T8 | 170-181 | NCBITaxon:11118 | denotes | coronavirus |
| T9 | 248-256 | SP_7 | denotes | COVID-19 |
| T10 | 273-285 | SP_10 | denotes | severe acute |
| T11 | 286-297 | SP_10;UBERON:0001004 | denotes | respiratory |
| T12 | 298-318 | SP_10 | denotes | syndrome coronavirus |
| T13 | 320-328 | SP_10 | denotes | SARS-CoV |
| T14 | 334-345 | SP_9 | denotes | middle east |
| T15 | 346-357 | SP_9;UBERON:0001004 | denotes | respiratory |
| T16 | 358-378 | SP_9 | denotes | syndrome coronavirus |
| T17 | 380-388 | SP_9 | denotes | MERS-CoV |
| T18 | 411-419 | SP_10 | denotes | SARS-CoV |
| T19 | 424-432 | SP_9 | denotes | MERS-CoV |
| T20 | 453-467 | UBERON:0000922 | denotes | extrapulmonary |
| T21 | 514-519 | UBERON:0002113 | denotes | renal |
| T22 | 604-612 | SP_7 | denotes | COVID-19 |
| T23 | 621-635 | UBERON:0000922 | denotes | extrapulmonary |
| T24 | 715-725 | UBERON:0000062 | denotes | multiorgan |
| T25 | 744-752 | SP_7 | denotes | COVID-19 |
| T61863 | 63-69 | GO:0016265 | denotes | deaths |
| T96894 | 72-80 | SP_7 | denotes | COVID-19 |
| T54545 | 170-181 | NCBITaxon:11118 | denotes | coronavirus |
| T38951 | 248-256 | SP_7 | denotes | COVID-19 |
| T88744 | 273-285 | SP_10 | denotes | severe acute |
| T67847 | 286-297 | SP_10;UBERON:0001004 | denotes | respiratory |
| T23325 | 298-318 | SP_10 | denotes | syndrome coronavirus |
| T78542 | 320-328 | SP_10 | denotes | SARS-CoV |
| T94267 | 334-345 | SP_9 | denotes | middle east |
| T27389 | 346-357 | SP_9;UBERON:0001004 | denotes | respiratory |
| T76373 | 358-378 | SP_9 | denotes | syndrome coronavirus |
| T55951 | 380-388 | SP_9 | denotes | MERS-CoV |
| T6936 | 411-419 | SP_10 | denotes | SARS-CoV |
| T69918 | 424-432 | SP_9 | denotes | MERS-CoV |
| T87705 | 453-467 | UBERON:0000922 | denotes | extrapulmonary |
| T62718 | 514-519 | UBERON:0002113 | denotes | renal |
| T8411 | 604-612 | SP_7 | denotes | COVID-19 |
| T97604 | 621-635 | UBERON:0000922 | denotes | extrapulmonary |
| T65109 | 715-725 | UBERON:0000062 | denotes | multiorgan |
| T96132 | 744-752 | SP_7 | denotes | COVID-19 |
| T403 | 19-27 | SP_10 | denotes | 2,400,0 |
| T404 | 44-49 | UBERON:0002107 | denotes | s and |
| T405 | 189-193 | G_3;PG_10;PR:000003622 | denotes | ks h |
| T406 | 226-233 | CL:0000182;UBERON:0002107 | denotes | severe |
| T407 | 234-245 | UBERON:0001986;CL:0000115 | denotes | neumonia li |
| T408 | 246-251 | CL:0000115 | denotes | e COV |
| T409 | 274-282 | SP_10 | denotes | evere ac |
| T410 | 314-319 | NCBITaxon:10239 | denotes | irus |
| T411 | 337-344 | UBERON:0002107 | denotes | dle eas |
| T412 | 345-357 | UBERON:0008987 | denotes | respiratory |
| T413 | 402-406 | PR:000001393 | denotes | er t |
| T414 | 411-416 | PR:000001471 | denotes | SARS- |
| T415 | 434-442 | SP_10 | denotes | ere show |
| T416 | 502-509 | UBERON:0002107;CL:0000182 | denotes | itis, a |
| T417 | 510-514 | CL:0000182;GO:0007049 | denotes | ute |
| T418 | 526-536 | GO:0007049 | denotes | e, encepha |
| T419 | 560-567 | UBERON:0002107 | denotes | roenter |
| T420 | 580-589 | GO:0006915 | denotes | ly, spora |
| T421 | 591-605 | GO:0071850 | denotes | c reports of C |
| T422 | 611-621 | CL:0000771 | denotes | 9 related |
| T423 | 646-657 | CL:0000182 | denotes | ions emerge |
| T424 | 676-683 | UBERON:0002107 | denotes | ere is |
| T425 | 802-810 | SP_10 | denotes | ucate th |
| T426 | 814-821 | UBERON:0002107 | denotes | lves ab |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 37 | 170-181 | Species | denotes | coronavirus | Tax:11118 |
| 38 | 273-318 | Species | denotes | severe acute respiratory syndrome coronavirus | Tax:694009 |
| 39 | 320-328 | Species | denotes | SARS-CoV | Tax:694009 |
| 40 | 334-389 | Species | denotes | middle east respiratory syndrome coronavirus (MERS-CoV) | Tax:1335626 |
| 41 | 411-419 | Species | denotes | SARS-CoV | Tax:694009 |
| 42 | 424-432 | Species | denotes | MERS-CoV | Tax:1335626 |
| 50 | 63-69 | Disease | denotes | deaths | MESH:D003643 |
| 51 | 72-80 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 52 | 97-106 | Disease | denotes | pneumonia | MESH:D011014 |
| 53 | 124-129 | Disease | denotes | fever | MESH:D005334 |
| 54 | 131-136 | Disease | denotes | cough | MESH:D003371 |
| 55 | 141-160 | Disease | denotes | shortness of breath | MESH:D004417 |
| 56 | 233-242 | Disease | denotes | pneumonia | MESH:D011014 |
| 57 | 248-256 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 58 | 497-506 | Disease | denotes | hepatitis | MESH:D056486 |
| 59 | 508-527 | Disease | denotes | acute renal failure | MESH:D058186 |
| 60 | 529-541 | Disease | denotes | encephalitis | MESH:D004660 |
| 61 | 543-571 | Disease | denotes | myositis and gastroenteritis | MESH:D005759 |
| 62 | 604-612 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 63 | 744-752 | Disease | denotes | COVID-19 | MESH:C000657245 |