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PMC:7212949 / 27345-28087 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T140 91-96 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T141 129-134 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T142 381-386 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T143 491-501 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T144 566-571 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T145 617-622 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T82 91-96 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T83 129-134 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T84 381-386 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T85 491-501 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T86 617-622 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T216 68-76 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T217 416-424 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T218 611-630 Disease denotes fatty liver disease http://purl.obolibrary.org/obo/MONDO_0004790
T219 732-739 Disease denotes obesity http://purl.obolibrary.org/obo/MONDO_0011122

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T268 91-96 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T269 91-96 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T270 129-134 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T271 129-134 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T272 243-244 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T273 381-386 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T274 381-386 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T275 491-501 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T276 566-571 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T277 617-622 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T278 617-622 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T80 144-153 Chemical denotes bilirubin http://purl.obolibrary.org/obo/CHEBI_16990
T81 158-165 Chemical denotes lactate http://purl.obolibrary.org/obo/CHEBI_24996

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T175 82-105 Phenotype denotes abnormal liver function http://purl.obolibrary.org/obo/HP_0002910
T176 120-142 Phenotype denotes elevated liver enzymes http://purl.obolibrary.org/obo/HP_0002910
T177 260-265 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T178 381-398 Phenotype denotes liver dysfunction http://purl.obolibrary.org/obo/HP_0001410
T179 617-630 Phenotype denotes liver disease http://purl.obolibrary.org/obo/HP_0001392
T180 732-739 Phenotype denotes obesity http://purl.obolibrary.org/obo/HP_0001513

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T295 0-201 Sentence denotes The few available studies show that as many as 51% of patients with COVID-19 have abnormal liver function on admission (elevated liver enzymes, bilirubin and lactate dehydrogenase levels) 66 (Table 2).
T296 202-742 Sentence denotes Patients with abnormal LFTs present with a high degree of fever, and their degree of hepatic dysfunction correlates with length of hospitalization.66 New reports suggest that the liver dysfunction in patients with COVID-19 may be related to damage to the cholangiocytes lining the biliary epithelium, likely due to the higher expression of ACE2 receptors on those cells.67 Patients with preexisting metabolic fatty liver disease have been seen to have an about 6-fold higher chance of severe disease in the presence of coexisting obesity.21

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T872 3-9 UBERON:0001836 denotes few a
T873 43-49 UBERON:0001836 denotes as 51
T874 70-75 UBERON:0001988 denotes VID-1
T875 131-139 CL:0000576 denotes ver enzy
T876 159-164 UBERON:0001988 denotes actat
T877 252-261 UBERON:0000916 denotes gree of f
T878 324-326 UBERON:0005409 denotes en
T879 357-362 UBERON:0001988 denotes eport
T880 588-600 CHEBI:33282;CHEBI:33282 denotes preexisting
T881 713-715 UBERON:0005409 denotes en

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
735 542-546 Gene denotes ACE2 Gene:59272
736 54-62 Species denotes patients Tax:9606
737 202-210 Species denotes Patients Tax:9606
738 402-410 Species denotes patients Tax:9606
739 575-583 Species denotes Patients Tax:9606
740 144-153 Chemical denotes bilirubin MESH:D001663
741 68-76 Disease denotes COVID-19 MESH:C000657245
742 260-265 Disease denotes fever MESH:D005334
743 287-306 Disease denotes hepatic dysfunction MESH:D008107
744 381-398 Disease denotes liver dysfunction MESH:D017093
745 416-424 Disease denotes COVID-19 MESH:C000657245
746 601-630 Disease denotes metabolic fatty liver disease MESH:D005234
747 732-739 Disease denotes obesity MESH:D009765

2_test

Id Subject Object Predicate Lexical cue
32620220-32283325-2074107 188-190 32283325 denotes 66
32620220-32283325-2074108 349-351 32283325 denotes 66
32620220-32109013-2074109 740-742 32109013 denotes 21