PMC:7212949 / 14914-15643
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T70 | 5-11 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T71 | 16-22 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
| T72 | 207-212 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T49 | 5-11 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T50 | 16-22 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
| T51 | 207-212 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T97 | 0-11 | Disease | denotes | Sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
| T98 | 398-402 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T99 | 544-548 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T100 | 619-638 | Disease | denotes | Respiratory failure | http://purl.obolibrary.org/obo/MONDO_0021113 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T112 | 207-212 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T113 | 238-240 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T114 | 345-346 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T115 | 522-523 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T116 | 616-618 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T117 | 653-654 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T94 | 0-11 | Phenotype | denotes | Sore throat | http://purl.obolibrary.org/obo/HP_0033050 |
| T95 | 79-86 | Phenotype | denotes | dyspnea | http://purl.obolibrary.org/obo/HP_0002094 |
| T96 | 619-638 | Phenotype | denotes | Respiratory failure | http://purl.obolibrary.org/obo/HP_0002878 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T198 | 0-729 | Sentence | denotes | Sore throat and sputum production are uncommon (5% or less).21 The presence of dyspnea is predictive of ICU admission.21 In early descriptions of hospitalized patients in China, all patients had an abnormal chest computed tomography.20 , 22 Ground glass opacities are common (56%), followed by consolidation and interstitial abnormalities.21 In a large Chinese study, the course was complicated by ARDS in 3.4% patients, 6.1% required mechanical ventilation, and the case fatality rate was 1.4-2.1%.21 Other studies noted a higher incidence of ARDS among hospitalized patients (29%), and higher mortality (15%).20 , 22 Respiratory failure tends to have a delayed onset, occurring approximately 1 week after the onset of symptoms. |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T655 | 18-21 | PR:000001004 | denotes | utu |
| T656 | 32-39 | CL:0000084 | denotes | n are u |
| T657 | 57-64 | UBERON:0002107 | denotes | s).21 T |
| T658 | 139-149 | GO:0010467 | denotes | ons of hos |
| T659 | 154-168 | CL:1000488 | denotes | ized patients |
| T660 | 183-194 | CL:0000182 | denotes | atients had |
| T661 | 230-237 | CHEBI:33695;CHEBI:33695 | denotes | hy.20 , |
| T662 | 252-259 | UBERON:0002107 | denotes | s opaci |
| T663 | 357-362 | UBERON:0002107 | denotes | ese s |
| T664 | 430-437 | UBERON:0002107 | denotes | ired me |
| T665 | 469-482 | CL:1000488 | denotes | se fatality r |
| T666 | 493-498 | NCBITaxon:10239 | denotes | -2.1% |
| T667 | 504-514 | CL:0000182 | denotes | her studie |
| T668 | 515-519 | CHEBI:23888;CHEBI:23888 | denotes | not |
| T669 | 631-634 | UBERON:0001970 | denotes | fai |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 357 | 159-167 | Species | denotes | patients | Tax:9606 |
| 358 | 182-190 | Species | denotes | patients | Tax:9606 |
| 359 | 411-419 | Species | denotes | patients | Tax:9606 |
| 360 | 568-576 | Species | denotes | patients | Tax:9606 |
| 370 | 79-86 | Disease | denotes | dyspnea | MESH:D004417 |
| 371 | 312-338 | Disease | denotes | interstitial abnormalities | MESH:D009395 |
| 372 | 398-402 | Disease | denotes | ARDS | MESH:D012128 |
| 373 | 544-548 | Disease | denotes | ARDS | MESH:D012128 |
| 374 | 595-604 | Disease | denotes | mortality | MESH:D003643 |
| 375 | 619-638 | Disease | denotes | Respiratory failure | MESH:D012131 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32620220-32109013-2074054 | 60-62 | 32109013 | denotes | 21 |
| 32620220-32109013-2074055 | 118-120 | 32109013 | denotes | 21 |
| 32620220-31986264-2074056 | 238-240 | 31986264 | denotes | 22 |
| 32620220-32109013-2074057 | 339-341 | 32109013 | denotes | 21 |
| 32620220-32109013-2074058 | 499-501 | 32109013 | denotes | 21 |
| 32620220-31986264-2074059 | 616-618 | 31986264 | denotes | 22 |