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PMC:7211620 / 6011-6569 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T22 46-51 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T23 99-112 Body_part denotes lateral chest http://purl.org/sig/ont/fma/fma24817
T24 231-236 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T25 296-301 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T26 504-508 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T14 46-51 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T15 107-112 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T16 185-202 Body_part denotes pleural effusions http://purl.obolibrary.org/obo/UBERON_0000175
T17 231-236 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T18 296-301 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T19 504-508 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T49 12-14 http://purl.obolibrary.org/obo/CLO_0001236 denotes 2a
T50 19-20 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T51 46-51 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T52 107-112 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T53 185-202 http://purl.obolibrary.org/obo/UBERON_0000175 denotes pleural effusions
T54 231-236 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T55 296-301 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T56 400-401 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T57 483-492 http://purl.obolibrary.org/obo/UBERON_0001353 denotes posterior
T58 504-508 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T59 504-508 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T54 0-94 Sentence denotes Fig. 2 Fig. 2a and b representing findings on chest X-ray performed on day 6 of symptom onset.
T55 95-203 Sentence denotes The lateral chest view revealed bilateral dorsal and basal coarse reticular opacities, no pleural effusions.
T56 204-273 Sentence denotes Fig. 2c and d representing chest CT scans on day 12 of symptom onset.
T57 274-558 Sentence denotes Axial CT image of the chest demonstrate extensive-ground glass opacities with bilateral and multi-lobar distribution (2c) and a combination of consolidation and surrounding ground-glass opacities basal in the posterior left lower lung (“reversed halo sign” - shown by the arrow) (2d).

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T33 185-202 Phenotype denotes pleural effusions http://purl.obolibrary.org/obo/HP_0002202
T34 511-529 Phenotype denotes reversed halo sign http://purl.obolibrary.org/obo/HP_0032983

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
139 185-202 Disease denotes pleural effusions MESH:D010996