PMC:7210460 / 746-1837 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/7210460","sourcedb":"PMC","sourceid":"7210460","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7210460","text":"An outbreak of series of acute respiratory illness caused by a novel coronavirus, SARS-CoV-2, caused a global threat in 20202. The world health organization (WHO) named the disease “COVID-19” and declared it as a world health emergency pandemic. Studying the crystal structure of targets for treatment is very crucial to know the mechanism of action of prospective drugs. A structural study on the coronavirus main protease 3CLpro inhibitor complex established designing of broad-spectrum halomethyl ketone inhibitors to the Coronaviridae family and demonstrated that these inhibitors form a thioether linkage with high affinity to the target3. Hilgenfeld’s group reported earlier that a structure-based design of peptidomimetic α-ketoamides are also effective broad-spectrum inhibitors to the main and 3C protease of coronaviruses and enteroviruses as demonstrated by crystal structure of inhibitor-protease complex4. The 3CL protease of coronaviruses facilitates viral assembly by cleaving polyproteins and most active compounds prevent disease progression by inhibiting viral proteases 5.","tracks":[{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T5","span":{"begin":82,"end":90},"obj":"Disease"},{"id":"T6","span":{"begin":182,"end":190},"obj":"Disease"}],"attributes":[{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T10","span":{"begin":61,"end":62},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T11","span":{"begin":101,"end":102},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T12","span":{"begin":144,"end":156},"obj":"http://purl.obolibrary.org/obo/OBI_0000245"},{"id":"T13","span":{"begin":211,"end":212},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T14","span":{"begin":372,"end":373},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T15","span":{"begin":590,"end":591},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T16","span":{"begin":686,"end":687},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T17","span":{"begin":1014,"end":1020},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"}],"attributes":[{"subj":"T10","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T17","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T9","span":{"begin":365,"end":370},"obj":"Chemical"},{"id":"T10","span":{"begin":431,"end":440},"obj":"Chemical"},{"id":"T11","span":{"begin":500,"end":506},"obj":"Chemical"},{"id":"T12","span":{"begin":507,"end":517},"obj":"Chemical"},{"id":"T13","span":{"begin":574,"end":584},"obj":"Chemical"},{"id":"T14","span":{"begin":658,"end":663},"obj":"Chemical"},{"id":"T15","span":{"begin":714,"end":728},"obj":"Chemical"},{"id":"T16","span":{"begin":776,"end":786},"obj":"Chemical"},{"id":"T17","span":{"begin":890,"end":899},"obj":"Chemical"}],"attributes":[{"id":"A9","pred":"chebi_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/CHEBI_23888"},{"id":"A10","pred":"chebi_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/CHEBI_35222"},{"id":"A11","pred":"chebi_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/CHEBI_17087"},{"id":"A12","pred":"chebi_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/CHEBI_35222"},{"id":"A13","pred":"chebi_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/CHEBI_35222"},{"id":"A14","pred":"chebi_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"id":"A15","pred":"chebi_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/CHEBI_63175"},{"id":"A16","pred":"chebi_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/CHEBI_35222"},{"id":"A17","pred":"chebi_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/CHEBI_35222"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T17","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T1","span":{"begin":31,"end":50},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/HP_0002086"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T2","span":{"begin":965,"end":979},"obj":"http://purl.obolibrary.org/obo/GO_0019068"}],"attributes":[{"subj":"T2","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T6","span":{"begin":0,"end":126},"obj":"Sentence"},{"id":"T7","span":{"begin":127,"end":245},"obj":"Sentence"},{"id":"T8","span":{"begin":246,"end":371},"obj":"Sentence"},{"id":"T9","span":{"begin":372,"end":644},"obj":"Sentence"},{"id":"T10","span":{"begin":645,"end":918},"obj":"Sentence"},{"id":"T11","span":{"begin":919,"end":1091},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T6","pred":"source","obj":"LitCovid-sentences"},{"subj":"T7","pred":"source","obj":"LitCovid-sentences"},{"subj":"T8","pred":"source","obj":"LitCovid-sentences"},{"subj":"T9","pred":"source","obj":"LitCovid-sentences"},{"subj":"T10","pred":"source","obj":"LitCovid-sentences"},{"subj":"T11","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"31","span":{"begin":63,"end":80},"obj":"Species"},{"id":"32","span":{"begin":82,"end":92},"obj":"Species"},{"id":"33","span":{"begin":398,"end":409},"obj":"Species"},{"id":"34","span":{"begin":525,"end":538},"obj":"Species"},{"id":"35","span":{"begin":818,"end":831},"obj":"Species"},{"id":"36","span":{"begin":939,"end":952},"obj":"Species"},{"id":"37","span":{"begin":489,"end":506},"obj":"Chemical"},{"id":"38","span":{"begin":592,"end":601},"obj":"Chemical"},{"id":"39","span":{"begin":729,"end":741},"obj":"Chemical"},{"id":"40","span":{"begin":31,"end":50},"obj":"Disease"},{"id":"41","span":{"begin":182,"end":190},"obj":"Disease"}],"attributes":[{"id":"A31","pred":"tao:has_database_id","subj":"31","obj":"Tax:2697049"},{"id":"A32","pred":"tao:has_database_id","subj":"32","obj":"Tax:2697049"},{"id":"A33","pred":"tao:has_database_id","subj":"33","obj":"Tax:11118"},{"id":"A34","pred":"tao:has_database_id","subj":"34","obj":"Tax:11118"},{"id":"A35","pred":"tao:has_database_id","subj":"35","obj":"Tax:11118"},{"id":"A36","pred":"tao:has_database_id","subj":"36","obj":"Tax:11118"},{"id":"A38","pred":"tao:has_database_id","subj":"38","obj":"MESH:D013440"},{"id":"A40","pred":"tao:has_database_id","subj":"40","obj":"MESH:D012140"},{"id":"A41","pred":"tao:has_database_id","subj":"41","obj":"MESH:C000657245"},{"subj":"31","pred":"source","obj":"LitCovid-PubTator"},{"subj":"32","pred":"source","obj":"LitCovid-PubTator"},{"subj":"33","pred":"source","obj":"LitCovid-PubTator"},{"subj":"34","pred":"source","obj":"LitCovid-PubTator"},{"subj":"35","pred":"source","obj":"LitCovid-PubTator"},{"subj":"36","pred":"source","obj":"LitCovid-PubTator"},{"subj":"37","pred":"source","obj":"LitCovid-PubTator"},{"subj":"38","pred":"source","obj":"LitCovid-PubTator"},{"subj":"39","pred":"source","obj":"LitCovid-PubTator"},{"subj":"40","pred":"source","obj":"LitCovid-PubTator"},{"subj":"41","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-MONDO","color":"#9396ec","default":true},{"id":"LitCovid-PD-CLO","color":"#b0ec93"},{"id":"LitCovid-PD-CHEBI","color":"#ec93ca"},{"id":"LitCovid-PD-HP","color":"#93e4ec"},{"id":"LitCovid-PD-GO-BP","color":"#ecda93"},{"id":"LitCovid-sentences","color":"#c093ec"},{"id":"LitCovid-PubTator","color":"#93eca6"}]}]}}