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PMC:7205724 / 6869-7092 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
251 175-184 Species denotes 2019-nCoV Tax:2697049
252 44-51 Chemical denotes proline MESH:D011392
253 140-156 Chemical denotes O-linked glycans

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T52 33-43 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T53 44-51 Body_part denotes proline http://purl.org/sig/ont/fma/fma82761

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T98 33-43 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T99 33-38 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T100 39-43 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T101 44-51 Chemical denotes proline http://purl.obolibrary.org/obo/CHEBI_17203|http://purl.obolibrary.org/obo/CHEBI_26271
T103 149-156 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T39 78-82 http://purl.obolibrary.org/obo/BFO_0000029 denotes site

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T69 33-43 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T70 44-51 Chemical denotes proline http://purl.obolibrary.org/obo/CHEBI_17203|http://purl.obolibrary.org/obo/CHEBI_26271
T72 149-156 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T61 100-117 Species denotes inserted sequence NCBItxid:45328
T62 175-184 Species denotes 2019-nCoV NCBItxid:2697049

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T64 0-223 Sentence denotes Also, due to the existence of an amino acid proline in the polybasic cleavage site, which makes the inserted sequence PRRA, there are three O-linked glycans introduced to the 2019-nCoV RBD residues S673, T678, and S686 [7].

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
252 44-51 Chemical denotes proline MESH:D011392
253 140-156 Chemical denotes O-linked glycans
251 175-184 Species denotes 2019-nCoV Tax:2697049

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T1035 185-188 Protein denotes RBD https://www.uniprot.org/uniprot/Q63492|https://www.uniprot.org/uniprot/Q63491|https://www.uniprot.org/uniprot/Q62815|https://www.uniprot.org/uniprot/Q62691|https://www.uniprot.org/uniprot/Q01542|https://www.uniprot.org/uniprot/P27732|https://www.uniprot.org/uniprot/O09024|https://www.uniprot.org/uniprot/O09023|https://www.uniprot.org/uniprot/O09022

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T1138 0-4 RB denotes Also
T1139 4-5 -COMMA- denotes ,
T1140 6-9 JJ denotes due
T1141 10-12 TO denotes to
T1142 13-16 DT denotes the
T1143 17-26 NN denotes existence
T1144 27-29 IN denotes of
T1145 30-32 DT denotes an
T1146 33-38 JJ denotes amino
T1147 39-43 NN denotes acid
T1148 44-51 NN denotes proline
T1149 52-54 IN denotes in
T1150 55-58 DT denotes the
T1151 59-68 JJ denotes polybasic
T1152 69-77 NN denotes cleavage
T1153 78-82 NN denotes site
T1154 82-83 -COMMA- denotes ,
T1155 84-89 WDT denotes which
T1156 90-95 VBZ denotes makes
T1157 96-99 DT denotes the
T1158 100-108 VBN denotes inserted
T1159 109-117 NN denotes sequence
T1160 118-122 NN denotes PRRA
T1161 122-123 -COMMA- denotes ,
T1162 124-129 EX denotes there
T1163 130-133 VBP denotes are
T1164 134-139 CD denotes three
T1165 140-148 JJ denotes O-linked
T1166 149-156 NNS denotes glycans
T1167 157-167 VBN denotes introduced
T1168 168-170 TO denotes to
T1169 171-174 DT denotes the
T1170 175-184 JJ denotes 2019-nCoV
T1171 185-188 NN denotes RBD
T1172 189-197 NNS denotes residues
T1173 198-202 NN denotes S673
T1174 202-203 -COMMA- denotes ,
T1175 204-208 NN denotes T678
T1176 208-209 -COMMA- denotes ,
T1177 210-213 CC denotes and
T1178 214-218 NN denotes S686
T1179 219-220 -LRB- denotes [
T1180 220-221 CD denotes 7
T1181 221-222 -RRB- denotes ]
R1131 T1163 T1138 arg1Of are,Also
R1132 T1163 T1139 arg1Of are,","
R1133 T1141 T1140 arg1Of to,due
R1134 T1163 T1141 arg1Of are,to
R1135 T1143 T1141 arg2Of existence,to
R1136 T1143 T1142 arg1Of existence,the
R1137 T1143 T1144 arg1Of existence,of
R1138 T1148 T1144 arg2Of proline,of
R1139 T1148 T1145 arg1Of proline,an
R1140 T1148 T1146 arg1Of proline,amino
R1141 T1148 T1147 arg1Of proline,acid
R1142 T1148 T1149 arg1Of proline,in
R1143 T1153 T1149 arg2Of site,in
R1144 T1153 T1150 arg1Of site,the
R1145 T1153 T1151 arg1Of site,polybasic
R1146 T1153 T1152 arg1Of site,cleavage
R1147 T1148 T1154 arg1Of proline,","
R1148 T1148 T1155 arg1Of proline,which
R1149 T1148 T1156 arg1Of proline,makes
R1150 T1160 T1156 arg2Of PRRA,makes
R1151 T1160 T1157 arg1Of PRRA,the
R1152 T1160 T1158 arg2Of PRRA,inserted
R1153 T1160 T1159 arg1Of PRRA,sequence
R1154 T1163 T1161 arg1Of are,","
R1155 T1162 T1163 arg1Of there,are
R1156 T1166 T1163 arg2Of glycans,are
R1157 T1166 T1164 arg1Of glycans,three
R1158 T1166 T1165 arg1Of glycans,O-linked
R1159 T1166 T1167 arg2Of glycans,introduced
R1160 T1167 T1168 arg1Of introduced,to
R1161 T1177 T1168 arg2Of and,to
R1162 T1177 T1169 arg1Of and,the
R1163 T1172 T1170 arg1Of residues,2019-nCoV
R1164 T1172 T1171 arg1Of residues,RBD
R1165 T1177 T1172 arg1Of and,residues
R1166 T1173 T1174 arg1Of S673,","
R1167 T1175 T1174 arg2Of T678,","
R1168 T1177 T1176 arg1Of and,","
R1169 T1174 T1177 arg1Of ",",and
R1170 T1178 T1177 arg2Of S686,and
R1171 T1177 T1179 arg1Of and,[
R1172 T1180 T1179 arg2Of 7,[
R1173 T1181 T1179 arg3Of ],[

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T52 33-43 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T53 44-51 Body_part denotes proline http://purl.org/sig/ont/fma/fma82761

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T64 0-223 Sentence denotes Also, due to the existence of an amino acid proline in the polybasic cleavage site, which makes the inserted sequence PRRA, there are three O-linked glycans introduced to the 2019-nCoV RBD residues S673, T678, and S686 [7].