PMC:7205724 / 6258-6480
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 230 | 40-59 | Chemical | denotes | N-acetylglucosamine | |
| 231 | 61-70 | Chemical | denotes | O-glycans | |
| 232 | 102-108 | Chemical | denotes | serine | MESH:D012694 |
| 233 | 110-113 | Chemical | denotes | Ser | MESH:D012694 |
| 234 | 119-128 | Chemical | denotes | threonine | MESH:D013912 |
| 235 | 130-133 | Chemical | denotes | Thr | MESH:D013912 |
| 236 | 166-188 | Chemical | denotes | N-acetyl galactosamine | |
| 237 | 190-196 | Chemical | denotes | GalNAc | |
| 238 | 212-221 | Chemical | denotes | N-glycans | |
| 240 | 14-26 | Disease | denotes | N-glycosidic | MESH:C563601 |
LitCovid_Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 40-59 | https://glytoucan.org/Structures/Glycans/G64581RP | denotes | N-acetylglucosamine |
| T2 | 166-188 | https://glytoucan.org/Structures/Glycans/G27025MB | denotes | N-acetyl galactosamine |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T42 | 40-59 | Body_part | denotes | N-acetylglucosamine | http://purl.org/sig/ont/fma/fma82787 |
| T43 | 91-101 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
| T44 | 102-108 | Body_part | denotes | serine | http://purl.org/sig/ont/fma/fma82764 |
| T45 | 110-113 | Body_part | denotes | Ser | http://purl.org/sig/ont/fma/fma82764 |
| T46 | 119-128 | Body_part | denotes | threonine | http://purl.org/sig/ont/fma/fma82765 |
| T47 | 130-133 | Body_part | denotes | Thr | http://purl.org/sig/ont/fma/fma82765 |
| T48 | 166-188 | Body_part | denotes | N-acetyl galactosamine | http://purl.org/sig/ont/fma/fma82786 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T69 | 40-59 | Chemical | denotes | N-acetylglucosamine | http://purl.obolibrary.org/obo/CHEBI_28009|http://purl.obolibrary.org/obo/CHEBI_59640 |
| T71 | 61-70 | Chemical | denotes | O-glycans | http://purl.obolibrary.org/obo/CHEBI_59521 |
| T72 | 63-70 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T73 | 91-101 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T74 | 91-96 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T75 | 97-101 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T76 | 102-108 | Chemical | denotes | serine | http://purl.obolibrary.org/obo/CHEBI_17822 |
| T77 | 110-113 | Chemical | denotes | Ser | http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999|http://purl.obolibrary.org/obo/CHEBI_17822 |
| T80 | 119-128 | Chemical | denotes | threonine | http://purl.obolibrary.org/obo/CHEBI_26986 |
| T81 | 130-133 | Chemical | denotes | Thr | http://purl.obolibrary.org/obo/CHEBI_16857|http://purl.obolibrary.org/obo/CHEBI_30013|http://purl.obolibrary.org/obo/CHEBI_26986 |
| T84 | 166-188 | Chemical | denotes | N-acetyl galactosamine | http://purl.obolibrary.org/obo/CHEBI_28800 |
| T85 | 168-174 | Chemical | denotes | acetyl | http://purl.obolibrary.org/obo/CHEBI_40574|http://purl.obolibrary.org/obo/CHEBI_46887 |
| T87 | 175-188 | Chemical | denotes | galactosamine | http://purl.obolibrary.org/obo/CHEBI_24156 |
| T88 | 190-196 | Chemical | denotes | GalNAc | http://purl.obolibrary.org/obo/CHEBI_28037|http://purl.obolibrary.org/obo/CHEBI_28800|http://purl.obolibrary.org/obo/CHEBI_24156 |
| T91 | 212-221 | Chemical | denotes | N-glycans | http://purl.obolibrary.org/obo/CHEBI_59520 |
| T92 | 214-221 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
LitCovid-sample-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T49 | 40-59 | Chemical | denotes | N-acetylglucosamine | http://purl.obolibrary.org/obo/CHEBI_28009|http://purl.obolibrary.org/obo/CHEBI_59640 |
| T51 | 61-70 | Chemical | denotes | O-glycans | http://purl.obolibrary.org/obo/CHEBI_59521 |
| T52 | 91-101 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T53 | 102-108 | Chemical | denotes | serine | http://purl.obolibrary.org/obo/CHEBI_17822 |
| T54 | 110-113 | Chemical | denotes | Ser | http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999|http://purl.obolibrary.org/obo/CHEBI_17822 |
| T57 | 119-128 | Chemical | denotes | threonine | http://purl.obolibrary.org/obo/CHEBI_26986 |
| T58 | 130-133 | Chemical | denotes | Thr | http://purl.obolibrary.org/obo/CHEBI_16857|http://purl.obolibrary.org/obo/CHEBI_30013|http://purl.obolibrary.org/obo/CHEBI_26986 |
| T61 | 166-188 | Chemical | denotes | N-acetyl galactosamine | http://purl.obolibrary.org/obo/CHEBI_28800 |
| T62 | 190-196 | Chemical | denotes | GalNAc | http://purl.obolibrary.org/obo/CHEBI_28037|http://purl.obolibrary.org/obo/CHEBI_28800|http://purl.obolibrary.org/obo/CHEBI_24156 |
| T65 | 212-221 | Chemical | denotes | N-glycans | http://purl.obolibrary.org/obo/CHEBI_59520 |
LitCovid-sample-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T60 | 61-198 | Sentence | denotes | O-glycans are attached to the amino acid serine (Ser) and threonine (Thr) residues by the addition of an N-acetyl galactosamine (GalNAc). |
LitCovid-sample-Pubtator
| Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
|---|---|---|---|---|---|
| 240 | 14-26 | Disease | denotes | N-glycosidic | MESH:C563601 |
| 230 | 40-59 | Chemical | denotes | N-acetylglucosamine | |
| 231 | 61-70 | Chemical | denotes | O-glycans | |
| 232 | 102-108 | Chemical | denotes | serine | MESH:D012694 |
| 233 | 110-113 | Chemical | denotes | Ser | MESH:D012694 |
| 234 | 119-128 | Chemical | denotes | threonine | MESH:D013912 |
| 235 | 130-133 | Chemical | denotes | Thr | MESH:D013912 |
| 236 | 166-188 | Chemical | denotes | N-acetyl galactosamine | |
| 237 | 190-196 | Chemical | denotes | GalNAc | |
| 238 | 212-221 | Chemical | denotes | N-glycans |
LitCovid-sample-Enju
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1028 | 1-10 | VBG | denotes | utilizing |
| T1029 | 11-13 | DT | denotes | an |
| T1030 | 14-26 | JJ | denotes | N-glycosidic |
| T1031 | 27-31 | NN | denotes | bond |
| T1032 | 31-32 | -COMMA- | denotes | , |
| T1033 | 33-39 | RB | denotes | mostly |
| T1034 | 40-59 | NN | denotes | N-acetylglucosamine |
| T1035 | 61-70 | NNS | denotes | O-glycans |
| T1036 | 71-74 | VBP | denotes | are |
| T1037 | 75-83 | VBN | denotes | attached |
| T1038 | 84-86 | TO | denotes | to |
| T1039 | 87-90 | DT | denotes | the |
| T1040 | 91-96 | JJ | denotes | amino |
| T1041 | 97-101 | NN | denotes | acid |
| T1042 | 102-108 | NN | denotes | serine |
| T1043 | 109-110 | -LRB- | denotes | ( |
| T1044 | 110-113 | NN | denotes | Ser |
| T1045 | 113-114 | -RRB- | denotes | ) |
| T1046 | 115-118 | CC | denotes | and |
| T1047 | 119-128 | NN | denotes | threonine |
| T1048 | 129-130 | -LRB- | denotes | ( |
| T1049 | 130-133 | NN | denotes | Thr |
| T1050 | 133-134 | -RRB- | denotes | ) |
| T1051 | 135-143 | NNS | denotes | residues |
| T1052 | 144-146 | IN | denotes | by |
| T1053 | 147-150 | DT | denotes | the |
| T1054 | 151-159 | NN | denotes | addition |
| T1055 | 160-162 | IN | denotes | of |
| T1056 | 163-165 | DT | denotes | an |
| T1057 | 166-174 | NN | denotes | N-acetyl |
| T1058 | 175-188 | NN | denotes | galactosamine |
| T1059 | 189-190 | -LRB- | denotes | ( |
| T1060 | 190-196 | NN | denotes | GalNAc |
| T1061 | 196-197 | -RRB- | denotes | ) |
| T1062 | 199-202 | IN | denotes | For |
| T1063 | 203-210 | NN | denotes | example |
| T1064 | 210-211 | -COMMA- | denotes | , |
| T1065 | 212-221 | NNS | denotes | N-glycans |
| R1036 | T1042 | T1043 | arg1Of | serine,( |
| R1037 | T1044 | T1043 | arg2Of | Ser,( |
| R1038 | T1045 | T1043 | arg3Of | ),( |
| R1039 | T1042 | T1046 | arg1Of | serine,and |
| R1040 | T1047 | T1046 | arg2Of | threonine,and |
| R1041 | T1051 | T1047 | arg1Of | residues,threonine |
| R1042 | T1047 | T1048 | arg1Of | threonine,( |
| R1043 | T1049 | T1048 | arg2Of | Thr,( |
| R1044 | T1050 | T1048 | arg3Of | ),( |
| R1045 | T1037 | T1052 | arg1Of | attached,by |
| R1046 | T1054 | T1052 | arg2Of | addition,by |
| R1047 | T1054 | T1053 | arg1Of | addition,the |
| R1048 | T1054 | T1055 | arg1Of | addition,of |
| R1049 | T1058 | T1055 | arg2Of | galactosamine,of |
| R1050 | T1058 | T1056 | arg1Of | galactosamine,an |
| R1021 | T1031 | T1028 | arg2Of | bond,utilizing |
| R1022 | T1031 | T1029 | arg1Of | bond,an |
| R1023 | T1031 | T1030 | arg1Of | bond,N-glycosidic |
| R1024 | T1031 | T1032 | arg1Of | bond,"," |
| R1025 | T1034 | T1032 | arg2Of | N-acetylglucosamine,"," |
| R1026 | T1034 | T1033 | arg1Of | N-acetylglucosamine,mostly |
| R1027 | T1035 | T1036 | arg1Of | O-glycans,are |
| R1028 | T1037 | T1036 | arg2Of | attached,are |
| R1029 | T1035 | T1037 | arg2Of | O-glycans,attached |
| R1030 | T1037 | T1038 | arg1Of | attached,to |
| R1031 | T1051 | T1038 | arg2Of | residues,to |
| R1032 | T1051 | T1039 | arg1Of | residues,the |
| R1033 | T1042 | T1040 | arg1Of | serine,amino |
| R1034 | T1042 | T1041 | arg1Of | serine,acid |
| R1035 | T1051 | T1042 | arg1Of | residues,serine |
| R1051 | T1058 | T1057 | arg1Of | galactosamine,N-acetyl |
| R1052 | T1058 | T1059 | arg1Of | galactosamine,( |
| R1053 | T1060 | T1059 | arg2Of | GalNAc,( |
| R1054 | T1061 | T1059 | arg3Of | ),( |
| R1056 | T1063 | T1062 | arg2Of | example,For |
LitCovid-sample-PD-FMA
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T42 | 40-59 | Body_part | denotes | N-acetylglucosamine | http://purl.org/sig/ont/fma/fma82787 |
| T43 | 91-101 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
| T44 | 102-108 | Body_part | denotes | serine | http://purl.org/sig/ont/fma/fma82764 |
| T45 | 110-113 | Body_part | denotes | Ser | http://purl.org/sig/ont/fma/fma82764 |
| T46 | 119-128 | Body_part | denotes | threonine | http://purl.org/sig/ont/fma/fma82765 |
| T47 | 130-133 | Body_part | denotes | Thr | http://purl.org/sig/ont/fma/fma82765 |
| T48 | 166-188 | Body_part | denotes | N-acetyl galactosamine | http://purl.org/sig/ont/fma/fma82786 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T60 | 61-198 | Sentence | denotes | O-glycans are attached to the amino acid serine (Ser) and threonine (Thr) residues by the addition of an N-acetyl galactosamine (GalNAc). |
LitCovid-sample-Glycan
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T33 | 130-133 | https://glytoucan.org/Structures/Glycans/G69371PB | denotes | Thr |
| T34 | 130-133 | https://glytoucan.org/Structures/Glycans/G00134PL | denotes | Thr |
| T35 | 130-133 | https://glytoucan.org/Structures/Glycans/G52865ZM | denotes | Thr |
| T36 | 130-133 | https://glytoucan.org/Structures/Glycans/G50601AY | denotes | Thr |
| T37 | 130-133 | https://glytoucan.org/Structures/Glycans/G27898GL | denotes | Thr |
| T38 | 130-133 | https://glytoucan.org/Structures/Glycans/G90753WM | denotes | Thr |
| T39 | 130-133 | https://glytoucan.org/Structures/Glycans/G57814GP | denotes | Thr |
| T40 | 130-133 | https://glytoucan.org/Structures/Glycans/G42918SL | denotes | Thr |
| T41 | 130-133 | https://glytoucan.org/Structures/Glycans/G81521LC | denotes | Thr |
| T42 | 130-133 | https://glytoucan.org/Structures/Glycans/G19289PT | denotes | Thr |
| T43 | 130-133 | https://glytoucan.org/Structures/Glycans/G23779KC | denotes | Thr |
| T44 | 130-133 | https://glytoucan.org/Structures/Glycans/G94729UX | denotes | Thr |
| T45 | 130-133 | https://glytoucan.org/Structures/Glycans/G49708JS | denotes | Thr |
| T46 | 130-133 | https://glytoucan.org/Structures/Glycans/G60349YI | denotes | Thr |
| T47 | 130-133 | https://glytoucan.org/Structures/Glycans/G63317ON | denotes | Thr |
| T48 | 130-133 | https://glytoucan.org/Structures/Glycans/G71284FA | denotes | Thr |
| T49 | 130-133 | https://glytoucan.org/Structures/Glycans/G42091PK | denotes | Thr |
| T50 | 130-133 | https://glytoucan.org/Structures/Glycans/G39722QK | denotes | Thr |
| T51 | 130-133 | https://glytoucan.org/Structures/Glycans/G76637LW | denotes | Thr |
| T52 | 130-133 | https://glytoucan.org/Structures/Glycans/G46130CG | denotes | Thr |
| T53 | 130-133 | https://glytoucan.org/Structures/Glycans/G05333AM | denotes | Thr |
| T54 | 130-133 | https://glytoucan.org/Structures/Glycans/G77428YW | denotes | Thr |
| T55 | 130-133 | https://glytoucan.org/Structures/Glycans/G15142RK | denotes | Thr |
| T56 | 130-133 | https://glytoucan.org/Structures/Glycans/G06824UZ | denotes | Thr |
| T57 | 130-133 | https://glytoucan.org/Structures/Glycans/G48723MN | denotes | Thr |
| T58 | 130-133 | https://glytoucan.org/Structures/Glycans/G35093GE | denotes | Thr |
| T59 | 130-133 | https://glytoucan.org/Structures/Glycans/G34845TQ | denotes | Thr |
| T60 | 130-133 | https://glytoucan.org/Structures/Glycans/G71815PL | denotes | Thr |
| T61 | 130-133 | https://glytoucan.org/Structures/Glycans/G97173UR | denotes | Thr |
| T62 | 130-133 | https://glytoucan.org/Structures/Glycans/G53453JD | denotes | Thr |
| T63 | 130-133 | https://glytoucan.org/Structures/Glycans/G81407LL | denotes | Thr |
| T64 | 130-133 | https://glytoucan.org/Structures/Glycans/G46430YF | denotes | Thr |
| T65 | 175-188 | http://rdf.glyconavi.org/CarTNa/CarTNa205/trivialname | denotes | galactosamine |
| T66 | 190-196 | https://glytoucan.org/Structures/Glycans/G23425WZ | denotes | GalNAc |
| T67 | 190-196 | https://glytoucan.org/Structures/Glycans/G02874VH | denotes | GalNAc |
| T68 | 190-196 | https://glytoucan.org/Structures/Glycans/G99699DW | denotes | GalNAc |
| T69 | 190-196 | https://glytoucan.org/Structures/Glycans/G22074RM | denotes | GalNAc |
| T70 | 190-196 | https://glytoucan.org/Structures/Glycans/G48535VZ | denotes | GalNAc |
| T71 | 190-196 | https://glytoucan.org/Structures/Glycans/G39738WL | denotes | GalNAc |
| T72 | 190-196 | https://glytoucan.org/Structures/Glycans/G42313WU | denotes | GalNAc |
| T73 | 190-196 | https://glytoucan.org/Structures/Glycans/G00393CK | denotes | GalNAc |
| T74 | 190-196 | https://glytoucan.org/Structures/Glycans/G46880SB | denotes | GalNAc |
| T75 | 190-196 | https://glytoucan.org/Structures/Glycans/G42649EX | denotes | GalNAc |
| T76 | 190-196 | https://glytoucan.org/Structures/Glycans/G75599IR | denotes | GalNAc |
| T77 | 190-196 | https://glytoucan.org/Structures/Glycans/G58985MU | denotes | GalNAc |
| T78 | 190-196 | https://glytoucan.org/Structures/Glycans/G92517PO | denotes | GalNAc |
| T79 | 190-196 | https://glytoucan.org/Structures/Glycans/G41473NX | denotes | GalNAc |
| T80 | 190-196 | https://glytoucan.org/Structures/Glycans/G71089RB | denotes | GalNAc |
| T81 | 190-196 | https://glytoucan.org/Structures/Glycans/G88512YL | denotes | GalNAc |
| T82 | 190-196 | https://glytoucan.org/Structures/Glycans/G73485GZ | denotes | GalNAc |
| T83 | 190-196 | https://glytoucan.org/Structures/Glycans/G61406KC | denotes | GalNAc |
| T84 | 190-196 | https://glytoucan.org/Structures/Glycans/G34412GZ | denotes | GalNAc |
| T85 | 190-196 | https://glytoucan.org/Structures/Glycans/G61442IL | denotes | GalNAc |
| T86 | 190-196 | https://glytoucan.org/Structures/Glycans/G93729MV | denotes | GalNAc |
| T87 | 190-196 | https://glytoucan.org/Structures/Glycans/G92144AE | denotes | GalNAc |
| T88 | 190-196 | http://rdf.glyconavi.org/CarTNa/CarTNa205/trivialname | denotes | GalNAc |