PMC:7205724 / 5311-7092
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 177 | 67-74 | Chemical | denotes | glycans | MESH:D011134 |
| 178 | 203-210 | Chemical | denotes | glycans | MESH:D011134 |
| 179 | 215-231 | Chemical | denotes | oligosaccharides | MESH:D009844 |
| 180 | 311-327 | Chemical | denotes | oligosaccharides | MESH:D009844 |
| 181 | 579-586 | Chemical | denotes | glycans | MESH:D011134 |
| 212 | 1178-1190 | Species | denotes | Hendra virus | Tax:63330 |
| 213 | 1192-1200 | Species | denotes | SARS-CoV | Tax:694009 |
| 214 | 1202-1217 | Species | denotes | influenza virus | Tax:11309 |
| 215 | 1236-1241 | Species | denotes | HIV-1 | Tax:11676 |
| 216 | 1247-1262 | Species | denotes | West Nile virus | Tax:11082 |
| 217 | 1303-1314 | Species | denotes | Ebola virus | Tax:205488 |
| 218 | 643-650 | Chemical | denotes | glycans | MESH:D011134 |
| 219 | 655-663 | Chemical | denotes | N-linked | |
| 220 | 668-684 | Chemical | denotes | O-linked glycans | |
| 221 | 768-777 | Chemical | denotes | N-glycans | |
| 222 | 819-828 | Chemical | denotes | O-glycans | |
| 223 | 830-839 | Chemical | denotes | N-glycans | |
| 224 | 869-879 | Chemical | denotes | asparagine | MESH:D001216 |
| 225 | 881-884 | Chemical | denotes | Asn | MESH:D001216 |
| 226 | 896-899 | Chemical | denotes | Asn | MESH:D001216 |
| 227 | 927-934 | Chemical | denotes | proline | MESH:D011392 |
| 228 | 936-939 | Chemical | denotes | Ser | MESH:D012694 |
| 229 | 943-946 | Chemical | denotes | Thr | MESH:D013912 |
| 230 | 987-1006 | Chemical | denotes | N-acetylglucosamine | |
| 231 | 1008-1017 | Chemical | denotes | O-glycans | |
| 232 | 1049-1055 | Chemical | denotes | serine | MESH:D012694 |
| 233 | 1057-1060 | Chemical | denotes | Ser | MESH:D012694 |
| 234 | 1066-1075 | Chemical | denotes | threonine | MESH:D013912 |
| 235 | 1077-1080 | Chemical | denotes | Thr | MESH:D013912 |
| 236 | 1113-1135 | Chemical | denotes | N-acetyl galactosamine | |
| 237 | 1137-1143 | Chemical | denotes | GalNAc | |
| 238 | 1159-1168 | Chemical | denotes | N-glycans | |
| 239 | 1272-1281 | Chemical | denotes | O-glycans | |
| 240 | 961-973 | Disease | denotes | N-glycosidic | MESH:C563601 |
| 241 | 1219-1234 | Disease | denotes | hepatitis virus | MESH:D006525 |
| 248 | 1330-1331 | Gene | denotes | S | Gene:43740568 |
| 249 | 1320-1329 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 250 | 1477-1485 | Species | denotes | SARS-CoV | Tax:694009 |
| 251 | 1733-1742 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 252 | 1602-1609 | Chemical | denotes | proline | MESH:D011392 |
| 253 | 1698-1714 | Chemical | denotes | O-linked glycans |
LitCovid_Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 987-1006 | https://glytoucan.org/Structures/Glycans/G64581RP | denotes | N-acetylglucosamine |
| T2 | 1113-1135 | https://glytoucan.org/Structures/Glycans/G27025MB | denotes | N-acetyl galactosamine |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T28 | 173-186 | Body_part | denotes | cell membrane | http://purl.org/sig/ont/fma/fma63841 |
| T29 | 173-177 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T30 | 215-231 | Body_part | denotes | oligosaccharides | http://purl.org/sig/ont/fma/fma82742 |
| T31 | 276-288 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T32 | 311-327 | Body_part | denotes | oligosaccharides | http://purl.org/sig/ont/fma/fma82742 |
| T33 | 373-380 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T34 | 439-443 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T35 | 491-503 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T36 | 709-722 | Body_part | denotes | glycoproteins | http://purl.org/sig/ont/fma/fma62925 |
| T37 | 858-868 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
| T38 | 904-915 | Body_part | denotes | amino acids | http://purl.org/sig/ont/fma/fma82739 |
| T39 | 927-934 | Body_part | denotes | proline | http://purl.org/sig/ont/fma/fma82761 |
| T40 | 936-939 | Body_part | denotes | Ser | http://purl.org/sig/ont/fma/fma82764 |
| T41 | 943-946 | Body_part | denotes | Thr | http://purl.org/sig/ont/fma/fma82765 |
| T42 | 987-1006 | Body_part | denotes | N-acetylglucosamine | http://purl.org/sig/ont/fma/fma82787 |
| T43 | 1038-1048 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
| T44 | 1049-1055 | Body_part | denotes | serine | http://purl.org/sig/ont/fma/fma82764 |
| T45 | 1057-1060 | Body_part | denotes | Ser | http://purl.org/sig/ont/fma/fma82764 |
| T46 | 1066-1075 | Body_part | denotes | threonine | http://purl.org/sig/ont/fma/fma82765 |
| T47 | 1077-1080 | Body_part | denotes | Thr | http://purl.org/sig/ont/fma/fma82765 |
| T48 | 1113-1135 | Body_part | denotes | N-acetyl galactosamine | http://purl.org/sig/ont/fma/fma82786 |
| T49 | 1236-1239 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
| T50 | 1332-1339 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T51 | 1488-1500 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T52 | 1591-1601 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
| T53 | 1602-1609 | Body_part | denotes | proline | http://purl.org/sig/ont/fma/fma82761 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T42 | 1192-1200 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T43 | 1202-1211 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T44 | 1212-1228 | Disease | denotes | virus, hepatitis | http://purl.obolibrary.org/obo/MONDO_0006011 |
| T45 | 1219-1228 | Disease | denotes | hepatitis | http://purl.obolibrary.org/obo/MONDO_0002251 |
| T46 | 1303-1308 | Disease | denotes | Ebola | http://purl.obolibrary.org/obo/MONDO_0005737 |
| T47 | 1477-1485 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T64 | 130-135 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T65 | 173-177 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T66 | 178-186 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
| T67 | 433-438 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T68 | 439-443 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T69 | 461-462 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T70 | 463-468 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T71 | 591-592 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T72 | 1185-1190 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T73 | 1212-1217 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T74 | 1229-1234 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T75 | 1257-1262 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T76 | 1309-1314 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T77 | 1395-1397 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T78 | 1402-1404 | http://purl.obolibrary.org/obo/CLO_0008922 | denotes | S2 |
| T79 | 1402-1404 | http://purl.obolibrary.org/obo/CLO_0050052 | denotes | S2 |
| T80 | 1554-1556 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T31 | 67-74 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T32 | 203-210 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T33 | 215-231 | Chemical | denotes | oligosaccharides | http://purl.obolibrary.org/obo/CHEBI_50699 |
| T34 | 276-288 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T35 | 311-327 | Chemical | denotes | oligosaccharides | http://purl.obolibrary.org/obo/CHEBI_50699 |
| T36 | 373-380 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T37 | 491-503 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T38 | 579-586 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T39 | 643-650 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T40 | 677-684 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T41 | 709-722 | Chemical | denotes | glycoproteins | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T42 | 768-777 | Chemical | denotes | N-glycans | http://purl.obolibrary.org/obo/CHEBI_59520 |
| T43 | 770-777 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T44 | 819-828 | Chemical | denotes | O-glycans | http://purl.obolibrary.org/obo/CHEBI_59521 |
| T45 | 821-828 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T46 | 830-839 | Chemical | denotes | N-glycans | http://purl.obolibrary.org/obo/CHEBI_59520 |
| T47 | 832-839 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T48 | 858-868 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T49 | 858-863 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T50 | 864-868 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T51 | 869-879 | Chemical | denotes | asparagine | http://purl.obolibrary.org/obo/CHEBI_22653 |
| T52 | 881-884 | Chemical | denotes | Asn | http://purl.obolibrary.org/obo/CHEBI_17196|http://purl.obolibrary.org/obo/CHEBI_22653|http://purl.obolibrary.org/obo/CHEBI_50347 |
| T55 | 896-899 | Chemical | denotes | Asn | http://purl.obolibrary.org/obo/CHEBI_17196|http://purl.obolibrary.org/obo/CHEBI_22653|http://purl.obolibrary.org/obo/CHEBI_50347 |
| T58 | 904-915 | Chemical | denotes | amino acids | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T59 | 904-909 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T60 | 910-915 | Chemical | denotes | acids | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T61 | 927-934 | Chemical | denotes | proline | http://purl.obolibrary.org/obo/CHEBI_17203|http://purl.obolibrary.org/obo/CHEBI_26271 |
| T63 | 936-939 | Chemical | denotes | Ser | http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999|http://purl.obolibrary.org/obo/CHEBI_17822 |
| T66 | 943-946 | Chemical | denotes | Thr | http://purl.obolibrary.org/obo/CHEBI_16857|http://purl.obolibrary.org/obo/CHEBI_30013|http://purl.obolibrary.org/obo/CHEBI_26986 |
| T69 | 987-1006 | Chemical | denotes | N-acetylglucosamine | http://purl.obolibrary.org/obo/CHEBI_28009|http://purl.obolibrary.org/obo/CHEBI_59640 |
| T71 | 1008-1017 | Chemical | denotes | O-glycans | http://purl.obolibrary.org/obo/CHEBI_59521 |
| T72 | 1010-1017 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T73 | 1038-1048 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T74 | 1038-1043 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T75 | 1044-1048 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T76 | 1049-1055 | Chemical | denotes | serine | http://purl.obolibrary.org/obo/CHEBI_17822 |
| T77 | 1057-1060 | Chemical | denotes | Ser | http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999|http://purl.obolibrary.org/obo/CHEBI_17822 |
| T80 | 1066-1075 | Chemical | denotes | threonine | http://purl.obolibrary.org/obo/CHEBI_26986 |
| T81 | 1077-1080 | Chemical | denotes | Thr | http://purl.obolibrary.org/obo/CHEBI_16857|http://purl.obolibrary.org/obo/CHEBI_30013|http://purl.obolibrary.org/obo/CHEBI_26986 |
| T84 | 1113-1135 | Chemical | denotes | N-acetyl galactosamine | http://purl.obolibrary.org/obo/CHEBI_28800 |
| T85 | 1115-1121 | Chemical | denotes | acetyl | http://purl.obolibrary.org/obo/CHEBI_40574|http://purl.obolibrary.org/obo/CHEBI_46887 |
| T87 | 1122-1135 | Chemical | denotes | galactosamine | http://purl.obolibrary.org/obo/CHEBI_24156 |
| T88 | 1137-1143 | Chemical | denotes | GalNAc | http://purl.obolibrary.org/obo/CHEBI_28037|http://purl.obolibrary.org/obo/CHEBI_28800|http://purl.obolibrary.org/obo/CHEBI_24156 |
| T91 | 1159-1168 | Chemical | denotes | N-glycans | http://purl.obolibrary.org/obo/CHEBI_59520 |
| T92 | 1161-1168 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T93 | 1272-1281 | Chemical | denotes | O-glycans | http://purl.obolibrary.org/obo/CHEBI_59521 |
| T94 | 1274-1281 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T95 | 1332-1339 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T96 | 1402-1404 | Chemical | denotes | S2 | http://purl.obolibrary.org/obo/CHEBI_29387 |
| T97 | 1488-1500 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T98 | 1591-1601 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T99 | 1591-1596 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T100 | 1597-1601 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T101 | 1602-1609 | Chemical | denotes | proline | http://purl.obolibrary.org/obo/CHEBI_17203|http://purl.obolibrary.org/obo/CHEBI_26271 |
| T103 | 1707-1714 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
LitCovid-sample-PD-IDO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26 | 51-59 | http://purl.obolibrary.org/obo/IDO_0000607 | denotes | products |
| T27 | 130-135 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T28 | 168-172 | http://purl.obolibrary.org/obo/IDO_0000531 | denotes | host |
| T29 | 173-177 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell |
| T30 | 433-438 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T31 | 439-443 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell |
| T32 | 463-468 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T33 | 550-566 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune responses |
| T34 | 1185-1190 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T35 | 1212-1217 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T36 | 1229-1234 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T37 | 1257-1262 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T38 | 1309-1314 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T39 | 1636-1640 | http://purl.obolibrary.org/obo/BFO_0000029 | denotes | site |
LitCovid-sample-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T18 | 67-74 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T19 | 203-210 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T20 | 215-231 | Chemical | denotes | oligosaccharides | http://purl.obolibrary.org/obo/CHEBI_50699 |
| T21 | 276-288 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T22 | 311-327 | Chemical | denotes | oligosaccharides | http://purl.obolibrary.org/obo/CHEBI_50699 |
| T23 | 373-380 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T24 | 491-503 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T25 | 579-586 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T26 | 643-650 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T27 | 677-684 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T28 | 709-722 | Chemical | denotes | glycoproteins | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T29 | 768-777 | Chemical | denotes | N-glycans | http://purl.obolibrary.org/obo/CHEBI_59520 |
| T30 | 819-828 | Chemical | denotes | O-glycans | http://purl.obolibrary.org/obo/CHEBI_59521 |
| T31 | 830-839 | Chemical | denotes | N-glycans | http://purl.obolibrary.org/obo/CHEBI_59520 |
| T32 | 858-868 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T33 | 869-879 | Chemical | denotes | asparagine | http://purl.obolibrary.org/obo/CHEBI_22653 |
| T34 | 881-884 | Chemical | denotes | Asn | http://purl.obolibrary.org/obo/CHEBI_17196|http://purl.obolibrary.org/obo/CHEBI_22653|http://purl.obolibrary.org/obo/CHEBI_50347 |
| T37 | 896-899 | Chemical | denotes | Asn | http://purl.obolibrary.org/obo/CHEBI_17196|http://purl.obolibrary.org/obo/CHEBI_22653|http://purl.obolibrary.org/obo/CHEBI_50347 |
| T40 | 904-915 | Chemical | denotes | amino acids | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T41 | 927-934 | Chemical | denotes | proline | http://purl.obolibrary.org/obo/CHEBI_17203|http://purl.obolibrary.org/obo/CHEBI_26271 |
| T43 | 936-939 | Chemical | denotes | Ser | http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999|http://purl.obolibrary.org/obo/CHEBI_17822 |
| T46 | 943-946 | Chemical | denotes | Thr | http://purl.obolibrary.org/obo/CHEBI_16857|http://purl.obolibrary.org/obo/CHEBI_30013|http://purl.obolibrary.org/obo/CHEBI_26986 |
| T49 | 987-1006 | Chemical | denotes | N-acetylglucosamine | http://purl.obolibrary.org/obo/CHEBI_28009|http://purl.obolibrary.org/obo/CHEBI_59640 |
| T51 | 1008-1017 | Chemical | denotes | O-glycans | http://purl.obolibrary.org/obo/CHEBI_59521 |
| T52 | 1038-1048 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T53 | 1049-1055 | Chemical | denotes | serine | http://purl.obolibrary.org/obo/CHEBI_17822 |
| T54 | 1057-1060 | Chemical | denotes | Ser | http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999|http://purl.obolibrary.org/obo/CHEBI_17822 |
| T57 | 1066-1075 | Chemical | denotes | threonine | http://purl.obolibrary.org/obo/CHEBI_26986 |
| T58 | 1077-1080 | Chemical | denotes | Thr | http://purl.obolibrary.org/obo/CHEBI_16857|http://purl.obolibrary.org/obo/CHEBI_30013|http://purl.obolibrary.org/obo/CHEBI_26986 |
| T61 | 1113-1135 | Chemical | denotes | N-acetyl galactosamine | http://purl.obolibrary.org/obo/CHEBI_28800 |
| T62 | 1137-1143 | Chemical | denotes | GalNAc | http://purl.obolibrary.org/obo/CHEBI_28037|http://purl.obolibrary.org/obo/CHEBI_28800|http://purl.obolibrary.org/obo/CHEBI_24156 |
| T65 | 1159-1168 | Chemical | denotes | N-glycans | http://purl.obolibrary.org/obo/CHEBI_59520 |
| T66 | 1272-1281 | Chemical | denotes | O-glycans | http://purl.obolibrary.org/obo/CHEBI_59521 |
| T67 | 1332-1339 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T68 | 1488-1500 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T69 | 1591-1601 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T70 | 1602-1609 | Chemical | denotes | proline | http://purl.obolibrary.org/obo/CHEBI_17203|http://purl.obolibrary.org/obo/CHEBI_26271 |
| T72 | 1707-1714 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
LitCovid-sample-PD-NCBITaxon
| Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
|---|---|---|---|---|---|
| T52 | 1178-1190 | Species | denotes | Hendra virus | NCBItxid:63330 |
| T53 | 1192-1200 | Species | denotes | SARS-CoV | NCBItxid:694009 |
| T54 | 1202-1217 | Species | denotes | influenza virus | NCBItxid:11309 |
| T55 | 1219-1234 | Species | denotes | hepatitis virus | NCBItxid:10407 |
| T56 | 1236-1241 | Species | denotes | HIV-1 | NCBItxid:11676 |
| T57 | 1247-1262 | Species | denotes | West Nile virus | NCBItxid:11082 |
| T58 | 1303-1314 | Species | denotes | Ebola virus | NCBItxid:1570291 |
| T59 | 1320-1329 | Species | denotes | 2019-nCoV | NCBItxid:2697049 |
| T60 | 1477-1485 | Species | denotes | SARS-CoV | NCBItxid:694009 |
| T61 | 1658-1675 | Species | denotes | inserted sequence | NCBItxid:45328 |
| T62 | 1733-1742 | Species | denotes | 2019-nCoV | NCBItxid:2697049 |
LitCovid-sample-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T50 | 0-20 | Sentence | denotes | 3.1.2 Glycosylation |
| T51 | 21-191 | Sentence | denotes | Glycosylation and its related products, i.e., glycans, introduce changes to the viral envelope that make the virus fitted for interaction with the host cell membrane [5]. |
| T52 | 192-289 | Sentence | denotes | Generally, glycans are oligosaccharides linked to the dense decoration of the spike glycoprotein. |
| T53 | 290-450 | Sentence | denotes | In particular, these oligosaccharides have shown to influence the folding of the S protein and proteolytic process so that they facilitate the virus cell entry. |
| T54 | 451-567 | Sentence | denotes | Moreover, a virus with the glycosylated glycoprotein gains an extra feature for an escape from the immune responses. |
| T55 | 568-624 | Sentence | denotes | Therefore, glycans are a good target for vaccine design. |
| T56 | 625-685 | Sentence | denotes | Two main types of glycans are N-linked and O-linked glycans. |
| T57 | 686-723 | Sentence | denotes | Both are released from glycoproteins. |
| T58 | 724-829 | Sentence | denotes | Whereas enzymes fulfill the construction of N-glycans, chemical methods perform the release of O-glycans. |
| T59 | 830-1007 | Sentence | denotes | N-glycans are linked to the amino acid asparagine (Asn) residues (Asn-any amino acids except for proline- Ser or Thr) utilizing an N-glycosidic bond, mostly N-acetylglucosamine. |
| T60 | 1008-1145 | Sentence | denotes | O-glycans are attached to the amino acid serine (Ser) and threonine (Thr) residues by the addition of an N-acetyl galactosamine (GalNAc). |
| T61 | 1146-1315 | Sentence | denotes | For example, N-glycans exist in Hendra virus, SARS-CoV, influenza virus, hepatitis virus, HIV-1, and West Nile virus [6], and O-glycans have occurred in the Ebola virus. |
| T62 | 1316-1431 | Sentence | denotes | The 2019-nCoV S protein includes 13 and 9N-linked glycosylation sequons in the S1 and S2 subunit, respectively [3]. |
| T63 | 1432-1557 | Sentence | denotes | All of these have previously occurred in the SARS-CoV S glycoprotein, except for four-linked glycosylation sequons in the S1. |
| T64 | 1558-1781 | Sentence | denotes | Also, due to the existence of an amino acid proline in the polybasic cleavage site, which makes the inserted sequence PRRA, there are three O-linked glycans introduced to the 2019-nCoV RBD residues S673, T678, and S686 [7]. |
LitCovid-sample-Pubtator
| Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
|---|---|---|---|---|---|
| 177 | 67-74 | Chemical | denotes | glycans | MESH:D011134 |
| 178 | 203-210 | Chemical | denotes | glycans | MESH:D011134 |
| 179 | 215-231 | Chemical | denotes | oligosaccharides | MESH:D009844 |
| 180 | 311-327 | Chemical | denotes | oligosaccharides | MESH:D009844 |
| 181 | 579-586 | Chemical | denotes | glycans | MESH:D011134 |
| 218 | 643-650 | Chemical | denotes | glycans | MESH:D011134 |
| 219 | 655-663 | Chemical | denotes | N-linked | |
| 220 | 668-684 | Chemical | denotes | O-linked glycans | |
| 221 | 768-777 | Chemical | denotes | N-glycans | |
| 222 | 819-828 | Chemical | denotes | O-glycans | |
| 223 | 830-839 | Chemical | denotes | N-glycans | |
| 224 | 869-879 | Chemical | denotes | asparagine | MESH:D001216 |
| 225 | 881-884 | Chemical | denotes | Asn | MESH:D001216 |
| 226 | 896-899 | Chemical | denotes | Asn | MESH:D001216 |
| 227 | 927-934 | Chemical | denotes | proline | MESH:D011392 |
| 228 | 936-939 | Chemical | denotes | Ser | MESH:D012694 |
| 229 | 943-946 | Chemical | denotes | Thr | MESH:D013912 |
| 240 | 961-973 | Disease | denotes | N-glycosidic | MESH:C563601 |
| 230 | 987-1006 | Chemical | denotes | N-acetylglucosamine | |
| 231 | 1008-1017 | Chemical | denotes | O-glycans | |
| 232 | 1049-1055 | Chemical | denotes | serine | MESH:D012694 |
| 233 | 1057-1060 | Chemical | denotes | Ser | MESH:D012694 |
| 234 | 1066-1075 | Chemical | denotes | threonine | MESH:D013912 |
| 235 | 1077-1080 | Chemical | denotes | Thr | MESH:D013912 |
| 236 | 1113-1135 | Chemical | denotes | N-acetyl galactosamine | |
| 237 | 1137-1143 | Chemical | denotes | GalNAc | |
| 238 | 1159-1168 | Chemical | denotes | N-glycans | |
| 212 | 1178-1190 | Species | denotes | Hendra virus | Tax:63330 |
| 213 | 1192-1200 | Species | denotes | SARS-CoV | Tax:694009 |
| 214 | 1202-1217 | Species | denotes | influenza virus | Tax:11309 |
| 241 | 1219-1234 | Disease | denotes | hepatitis virus | MESH:D006525 |
| 215 | 1236-1241 | Species | denotes | HIV-1 | Tax:11676 |
| 216 | 1247-1262 | Species | denotes | West Nile virus | Tax:11082 |
| 239 | 1272-1281 | Chemical | denotes | O-glycans | |
| 217 | 1303-1314 | Species | denotes | Ebola virus | Tax:205488 |
| 249 | 1320-1329 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 248 | 1330-1331 | Gene | denotes | S | Gene:43740568 |
| 250 | 1477-1485 | Species | denotes | SARS-CoV | Tax:694009 |
| 252 | 1602-1609 | Chemical | denotes | proline | MESH:D011392 |
| 253 | 1698-1714 | Chemical | denotes | O-linked glycans | |
| 251 | 1733-1742 | Species | denotes | 2019-nCoV | Tax:2697049 |
LitCovid-sample-UniProt
| Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
|---|---|---|---|---|---|
| T596 | 270-288 | Protein | denotes | spike glycoprotein | https://www.uniprot.org/uniprot/Q9QAS2|https://www.uniprot.org/uniprot/Q9QAR5|https://www.uniprot.org/uniprot/Q9QAQ8|https://www.uniprot.org/uniprot/Q9IW04|https://www.uniprot.org/uniprot/Q9IKD1|https://www.uniprot.org/uniprot/Q990M4|https://www.uniprot.org/uniprot/Q990M3|https://www.uniprot.org/uniprot/Q990M2|https://www.uniprot.org/uniprot/Q990M1|https://www.uniprot.org/uniprot/Q91AV1|https://www.uniprot.org/uniprot/Q91A26|https://www.uniprot.org/uniprot/Q8V436|https://www.uniprot.org/uniprot/Q8JSP8|https://www.uniprot.org/uniprot/Q8BB25|https://www.uniprot.org/uniprot/Q86623|https://www.uniprot.org/uniprot/Q85088|https://www.uniprot.org/uniprot/Q85087|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q80BV6|https://www.uniprot.org/uniprot/Q7TFB1|https://www.uniprot.org/uniprot/Q7TFA2|https://www.uniprot.org/uniprot/Q7TA19|https://www.uniprot.org/uniprot/Q7T6T3|https://www.uniprot.org/uniprot/Q7T696|https://www.uniprot.org/uniprot/Q77NC4|https://www.uniprot.org/uniprot/Q6TNF9|https://www.uniprot.org/uniprot/Q6R1L7|https://www.uniprot.org/uniprot/Q6QU82|https://www.uniprot.org/uniprot/Q6Q1S2|https://www.uniprot.org/uniprot/Q696Q6|https://www.uniprot.org/uniprot/Q66291|https://www.uniprot.org/uniprot/Q66290|https://www.uniprot.org/uniprot/Q66199|https://www.uniprot.org/uniprot/Q66177|https://www.uniprot.org/uniprot/Q66176|https://www.uniprot.org/uniprot/Q66174|https://www.uniprot.org/uniprot/Q65984|https://www.uniprot.org/uniprot/Q5MQD0|https://www.uniprot.org/uniprot/Q5I5X9|https://www.uniprot.org/uniprot/Q5DIY0|https://www.uniprot.org/uniprot/Q5DIX9|https://www.uniprot.org/uniprot/Q5DIX8|https://www.uniprot.org/uniprot/Q5DIX7|https://www.uniprot.org/uniprot/Q52PA3|https://www.uniprot.org/uniprot/Q4ZJS1|https://www.uniprot.org/uniprot/Q4U5G0|https://www.uniprot.org/uniprot/Q3T8J0|https://www.uniprot.org/uniprot/Q3LZX1|https://www.uniprot.org/uniprot/Q3I5J5|https://www.uniprot.org/uniprot/Q14EB0|https://www.uniprot.org/uniprot/Q0ZME7|https://www.uniprot.org/uniprot/Q0Q4F2|https://www.uniprot.org/uniprot/Q0Q475|https://www.uniprot.org/uniprot/Q0Q466|https://www.uniprot.org/uniprot/Q0GNB8|https://www.uniprot.org/uniprot/Q02385|https://www.uniprot.org/uniprot/Q02167|https://www.uniprot.org/uniprot/Q01977|https://www.uniprot.org/uniprot/Q008X4|https://www.uniprot.org/uniprot/P89344|https://www.uniprot.org/uniprot/P89343|https://www.uniprot.org/uniprot/P89342|https://www.uniprot.org/uniprot/P59594|https://www.uniprot.org/uniprot/P36334|https://www.uniprot.org/uniprot/P36300|https://www.uniprot.org/uniprot/P33470|https://www.uniprot.org/uniprot/P30208|https://www.uniprot.org/uniprot/P30207|https://www.uniprot.org/uniprot/P30206|https://www.uniprot.org/uniprot/P27662|https://www.uniprot.org/uniprot/P27655|https://www.uniprot.org/uniprot/P27277|https://www.uniprot.org/uniprot/P25194|https://www.uniprot.org/uniprot/P25193|https://www.uniprot.org/uniprot/P25192|https://www.uniprot.org/uniprot/P25191|https://www.uniprot.org/uniprot/P25190|https://www.uniprot.org/uniprot/P24413|https://www.uniprot.org/uniprot/P23052|https://www.uniprot.org/uniprot/P22432|https://www.uniprot.org/uniprot/P18450|https://www.uniprot.org/uniprot/P17662|https://www.uniprot.org/uniprot/P15777|https://www.uniprot.org/uniprot/P15423|https://www.uniprot.org/uniprot/P12722|https://www.uniprot.org/uniprot/P12651|https://www.uniprot.org/uniprot/P12650|https://www.uniprot.org/uniprot/P12647|https://www.uniprot.org/uniprot/P11225|https://www.uniprot.org/uniprot/P11224|https://www.uniprot.org/uniprot/P11223|https://www.uniprot.org/uniprot/P10033|https://www.uniprot.org/uniprot/P0DTC2|https://www.uniprot.org/uniprot/P07946|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P05135|https://www.uniprot.org/uniprot/P05134|https://www.uniprot.org/uniprot/O90304|https://www.uniprot.org/uniprot/O39227|https://www.uniprot.org/uniprot/K9N5Q8|https://www.uniprot.org/uniprot/A3EXG6|https://www.uniprot.org/uniprot/A3EXD0|https://www.uniprot.org/uniprot/A3EX94 |
| T700 | 371-380 | Protein | denotes | S protein | https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9 |
| T733 | 491-503 | Protein | denotes | glycoprotein | https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8 |
| T818 | 709-722 | Protein | denotes | glycoproteins | https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8 |
| T903 | 1330-1339 | Protein | denotes | S protein | https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9 |
| T936 | 1486-1500 | Protein | denotes | S glycoprotein | https://www.uniprot.org/uniprot/Q9QAS2|https://www.uniprot.org/uniprot/Q9QAR5|https://www.uniprot.org/uniprot/Q9QAQ8|https://www.uniprot.org/uniprot/Q9IW04|https://www.uniprot.org/uniprot/Q9IKD1|https://www.uniprot.org/uniprot/Q990M4|https://www.uniprot.org/uniprot/Q990M3|https://www.uniprot.org/uniprot/Q990M2|https://www.uniprot.org/uniprot/Q990M1|https://www.uniprot.org/uniprot/Q91AV1|https://www.uniprot.org/uniprot/Q91A26|https://www.uniprot.org/uniprot/Q8V436|https://www.uniprot.org/uniprot/Q8JSP8|https://www.uniprot.org/uniprot/Q8BB25|https://www.uniprot.org/uniprot/Q86623|https://www.uniprot.org/uniprot/Q85088|https://www.uniprot.org/uniprot/Q85087|https://www.uniprot.org/uniprot/Q80BV6|https://www.uniprot.org/uniprot/Q7TFB1|https://www.uniprot.org/uniprot/Q7TFA2|https://www.uniprot.org/uniprot/Q7TA19|https://www.uniprot.org/uniprot/Q7T6T3|https://www.uniprot.org/uniprot/Q7T696|https://www.uniprot.org/uniprot/Q77NC4|https://www.uniprot.org/uniprot/Q6TNF9|https://www.uniprot.org/uniprot/Q6R1L7|https://www.uniprot.org/uniprot/Q6QU82|https://www.uniprot.org/uniprot/Q6Q1S2|https://www.uniprot.org/uniprot/Q696Q6|https://www.uniprot.org/uniprot/Q66291|https://www.uniprot.org/uniprot/Q66290|https://www.uniprot.org/uniprot/Q66199|https://www.uniprot.org/uniprot/Q66177|https://www.uniprot.org/uniprot/Q66176|https://www.uniprot.org/uniprot/Q66174|https://www.uniprot.org/uniprot/Q65984|https://www.uniprot.org/uniprot/Q5MQD0|https://www.uniprot.org/uniprot/Q5I5X9|https://www.uniprot.org/uniprot/Q5DIY0|https://www.uniprot.org/uniprot/Q5DIX9|https://www.uniprot.org/uniprot/Q5DIX8|https://www.uniprot.org/uniprot/Q5DIX7|https://www.uniprot.org/uniprot/Q52PA3|https://www.uniprot.org/uniprot/Q4ZJS1|https://www.uniprot.org/uniprot/Q4U5G0|https://www.uniprot.org/uniprot/Q3T8J0|https://www.uniprot.org/uniprot/Q3LZX1|https://www.uniprot.org/uniprot/Q3I5J5|https://www.uniprot.org/uniprot/Q14EB0|https://www.uniprot.org/uniprot/Q0ZME7|https://www.uniprot.org/uniprot/Q0Q4F2|https://www.uniprot.org/uniprot/Q0Q475|https://www.uniprot.org/uniprot/Q0Q466|https://www.uniprot.org/uniprot/Q0GNB8|https://www.uniprot.org/uniprot/Q02385|https://www.uniprot.org/uniprot/Q02167|https://www.uniprot.org/uniprot/Q01977|https://www.uniprot.org/uniprot/Q008X4|https://www.uniprot.org/uniprot/P89344|https://www.uniprot.org/uniprot/P89343|https://www.uniprot.org/uniprot/P89342|https://www.uniprot.org/uniprot/P59594|https://www.uniprot.org/uniprot/P36334|https://www.uniprot.org/uniprot/P36300|https://www.uniprot.org/uniprot/P33470|https://www.uniprot.org/uniprot/P30208|https://www.uniprot.org/uniprot/P30207|https://www.uniprot.org/uniprot/P30206|https://www.uniprot.org/uniprot/P30019|https://www.uniprot.org/uniprot/P27655|https://www.uniprot.org/uniprot/P25194|https://www.uniprot.org/uniprot/P25193|https://www.uniprot.org/uniprot/P25192|https://www.uniprot.org/uniprot/P25191|https://www.uniprot.org/uniprot/P25190|https://www.uniprot.org/uniprot/P24413|https://www.uniprot.org/uniprot/P23052|https://www.uniprot.org/uniprot/P22432|https://www.uniprot.org/uniprot/P18450|https://www.uniprot.org/uniprot/P17662|https://www.uniprot.org/uniprot/P15777|https://www.uniprot.org/uniprot/P15423|https://www.uniprot.org/uniprot/P12722|https://www.uniprot.org/uniprot/P12651|https://www.uniprot.org/uniprot/P12650|https://www.uniprot.org/uniprot/P11225|https://www.uniprot.org/uniprot/P11224|https://www.uniprot.org/uniprot/P11223|https://www.uniprot.org/uniprot/P10033|https://www.uniprot.org/uniprot/P0DTC2|https://www.uniprot.org/uniprot/P07946|https://www.uniprot.org/uniprot/P05135|https://www.uniprot.org/uniprot/P05134|https://www.uniprot.org/uniprot/O90304|https://www.uniprot.org/uniprot/O39227|https://www.uniprot.org/uniprot/K9N5Q8|https://www.uniprot.org/uniprot/A3EXG6|https://www.uniprot.org/uniprot/A3EXD0|https://www.uniprot.org/uniprot/A3EX94 |
| T1035 | 1743-1746 | Protein | denotes | RBD | https://www.uniprot.org/uniprot/Q63492|https://www.uniprot.org/uniprot/Q63491|https://www.uniprot.org/uniprot/Q62815|https://www.uniprot.org/uniprot/Q62691|https://www.uniprot.org/uniprot/Q01542|https://www.uniprot.org/uniprot/P27732|https://www.uniprot.org/uniprot/O09024|https://www.uniprot.org/uniprot/O09023|https://www.uniprot.org/uniprot/O09022 |
LitCovid-sample-Enju
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T873 | 0-5 | CD | denotes | 3.1.2 |
| T874 | 7-20 | NN | denotes | Glycosylation |
| T875 | 21-34 | NN | denotes | Glycosylation |
| T876 | 35-38 | CC | denotes | and |
| T877 | 39-42 | PRP-DOLLAR- | denotes | its |
| T878 | 43-50 | JJ | denotes | related |
| T879 | 51-59 | NNS | denotes | products |
| T880 | 59-60 | -COMMA- | denotes | , |
| T881 | 61-65 | FW | denotes | i.e. |
| T882 | 65-66 | -COMMA- | denotes | , |
| T883 | 67-74 | NNS | denotes | glycans |
| T884 | 74-75 | -COMMA- | denotes | , |
| T885 | 76-85 | VBP | denotes | introduce |
| T886 | 86-93 | NNS | denotes | changes |
| T887 | 94-96 | TO | denotes | to |
| T888 | 97-100 | DT | denotes | the |
| T889 | 101-106 | JJ | denotes | viral |
| T890 | 107-115 | NN | denotes | envelope |
| T891 | 116-120 | WDT | denotes | that |
| T892 | 121-125 | VBP | denotes | make |
| T893 | 126-129 | DT | denotes | the |
| T894 | 130-135 | NN | denotes | virus |
| T895 | 136-142 | VBN | denotes | fitted |
| T896 | 143-146 | IN | denotes | for |
| T897 | 147-158 | NN | denotes | interaction |
| T898 | 159-163 | IN | denotes | with |
| T899 | 164-167 | DT | denotes | the |
| T900 | 168-172 | NN | denotes | host |
| T901 | 173-177 | NN | denotes | cell |
| T902 | 178-186 | NN | denotes | membrane |
| T903 | 187-188 | -LRB- | denotes | [ |
| T904 | 188-189 | CD | denotes | 5 |
| T905 | 189-190 | -RRB- | denotes | ] |
| T906 | 192-201 | RB | denotes | Generally |
| T907 | 201-202 | -COMMA- | denotes | , |
| T908 | 203-210 | NNS | denotes | glycans |
| T909 | 211-214 | VBP | denotes | are |
| T910 | 215-231 | NNS | denotes | oligosaccharides |
| T911 | 232-238 | VBN | denotes | linked |
| T912 | 239-241 | TO | denotes | to |
| T913 | 242-245 | DT | denotes | the |
| T914 | 246-251 | JJ | denotes | dense |
| T915 | 252-262 | NN | denotes | decoration |
| T916 | 263-265 | IN | denotes | of |
| T917 | 266-269 | DT | denotes | the |
| T918 | 270-275 | NN | denotes | spike |
| T919 | 276-288 | NN | denotes | glycoprotein |
| T920 | 290-292 | IN | denotes | In |
| T921 | 293-303 | JJ | denotes | particular |
| T922 | 303-304 | -COMMA- | denotes | , |
| T923 | 305-310 | DT | denotes | these |
| T924 | 311-327 | NNS | denotes | oligosaccharides |
| T925 | 328-332 | VBP | denotes | have |
| T926 | 333-338 | VBN | denotes | shown |
| T927 | 339-341 | TO | denotes | to |
| T928 | 342-351 | VB | denotes | influence |
| T929 | 352-355 | DT | denotes | the |
| T930 | 356-363 | NN | denotes | folding |
| T931 | 364-366 | IN | denotes | of |
| T932 | 367-370 | DT | denotes | the |
| T933 | 371-372 | NN | denotes | S |
| T934 | 373-380 | NN | denotes | protein |
| T935 | 381-384 | CC | denotes | and |
| T936 | 385-396 | JJ | denotes | proteolytic |
| T937 | 397-404 | NN | denotes | process |
| T938 | 405-407 | IN | denotes | so |
| T939 | 408-412 | IN | denotes | that |
| T940 | 413-417 | PRP | denotes | they |
| T941 | 418-428 | VBP | denotes | facilitate |
| T942 | 429-432 | DT | denotes | the |
| T943 | 433-438 | NN | denotes | virus |
| T944 | 439-443 | NN | denotes | cell |
| T945 | 444-449 | NN | denotes | entry |
| T946 | 451-459 | RB | denotes | Moreover |
| T947 | 459-460 | -COMMA- | denotes | , |
| T948 | 461-462 | DT | denotes | a |
| T949 | 463-468 | NN | denotes | virus |
| T950 | 469-473 | IN | denotes | with |
| T951 | 474-477 | DT | denotes | the |
| T952 | 478-490 | VBN | denotes | glycosylated |
| T953 | 491-503 | NN | denotes | glycoprotein |
| T954 | 504-509 | VBZ | denotes | gains |
| T955 | 510-512 | DT | denotes | an |
| T956 | 513-518 | JJ | denotes | extra |
| T957 | 519-526 | NN | denotes | feature |
| T958 | 527-530 | IN | denotes | for |
| T959 | 531-533 | DT | denotes | an |
| T960 | 534-540 | NN | denotes | escape |
| T961 | 541-545 | IN | denotes | from |
| T962 | 546-549 | DT | denotes | the |
| T963 | 550-556 | JJ | denotes | immune |
| T964 | 557-566 | NNS | denotes | responses |
| T965 | 568-577 | RB | denotes | Therefore |
| T966 | 577-578 | -COMMA- | denotes | , |
| T967 | 579-586 | NNS | denotes | glycans |
| T968 | 587-590 | VBP | denotes | are |
| T969 | 591-592 | DT | denotes | a |
| T970 | 593-597 | JJ | denotes | good |
| T971 | 598-604 | NN | denotes | target |
| T972 | 605-608 | IN | denotes | for |
| T973 | 609-616 | NN | denotes | vaccine |
| T974 | 617-623 | NN | denotes | design |
| T975 | 625-628 | CD | denotes | Two |
| T976 | 629-633 | JJ | denotes | main |
| T977 | 634-639 | NNS | denotes | types |
| T978 | 640-642 | IN | denotes | of |
| T979 | 643-650 | NNS | denotes | glycans |
| T980 | 651-654 | VBP | denotes | are |
| T981 | 655-663 | VBN | denotes | N-linked |
| T982 | 664-667 | CC | denotes | and |
| T983 | 668-676 | JJ | denotes | O-linked |
| T984 | 677-684 | NNS | denotes | glycans |
| T985 | 686-690 | DT | denotes | Both |
| T986 | 691-694 | VBP | denotes | are |
| T987 | 695-703 | VBN | denotes | released |
| T988 | 704-708 | IN | denotes | from |
| T989 | 709-722 | NNS | denotes | glycoproteins |
| T990 | 724-731 | IN | denotes | Whereas |
| T991 | 732-739 | NNS | denotes | enzymes |
| T992 | 740-747 | VBP | denotes | fulfill |
| T993 | 748-751 | DT | denotes | the |
| T994 | 752-764 | NN | denotes | construction |
| T995 | 765-767 | IN | denotes | of |
| T996 | 768-777 | NNS | denotes | N-glycans |
| T997 | 777-778 | -COMMA- | denotes | , |
| T998 | 779-787 | JJ | denotes | chemical |
| T999 | 788-795 | NNS | denotes | methods |
| T1000 | 796-803 | VBP | denotes | perform |
| T1001 | 804-807 | DT | denotes | the |
| T1002 | 808-815 | NN | denotes | release |
| T1003 | 816-818 | IN | denotes | of |
| T1004 | 819-828 | NNS | denotes | O-glycans |
| T1005 | 830-839 | NNS | denotes | N-glycans |
| T1006 | 840-843 | VBP | denotes | are |
| T1007 | 844-850 | VBN | denotes | linked |
| T1008 | 851-853 | TO | denotes | to |
| T1009 | 854-857 | DT | denotes | the |
| T1010 | 858-863 | JJ | denotes | amino |
| T1011 | 864-868 | NN | denotes | acid |
| T1012 | 869-879 | NN | denotes | asparagine |
| T1013 | 880-881 | -LRB- | denotes | ( |
| T1014 | 881-884 | NN | denotes | Asn |
| T1015 | 884-885 | -RRB- | denotes | ) |
| T1016 | 886-894 | NNS | denotes | residues |
| T1017 | 895-896 | -LRB- | denotes | ( |
| T1018 | 896-903 | JJ | denotes | Asn-any |
| T1019 | 904-909 | NN | denotes | amino |
| T1020 | 910-915 | NNS | denotes | acids |
| T1021 | 916-922 | IN | denotes | except |
| T1022 | 923-926 | IN | denotes | for |
| T1023 | 927-935 | NN | denotes | proline- |
| T1024 | 936-939 | NN | denotes | Ser |
| T1025 | 940-942 | CC | denotes | or |
| T1026 | 943-946 | NN | denotes | Thr |
| T1027 | 946-947 | -RRB- | denotes | ) |
| T1028 | 948-957 | VBG | denotes | utilizing |
| T1029 | 958-960 | DT | denotes | an |
| T1030 | 961-973 | JJ | denotes | N-glycosidic |
| T1031 | 974-978 | NN | denotes | bond |
| T1032 | 978-979 | -COMMA- | denotes | , |
| T1033 | 980-986 | RB | denotes | mostly |
| T1034 | 987-1006 | NN | denotes | N-acetylglucosamine |
| T1035 | 1008-1017 | NNS | denotes | O-glycans |
| T1036 | 1018-1021 | VBP | denotes | are |
| T1037 | 1022-1030 | VBN | denotes | attached |
| T1038 | 1031-1033 | TO | denotes | to |
| T1039 | 1034-1037 | DT | denotes | the |
| T1040 | 1038-1043 | JJ | denotes | amino |
| T1041 | 1044-1048 | NN | denotes | acid |
| T1042 | 1049-1055 | NN | denotes | serine |
| T1043 | 1056-1057 | -LRB- | denotes | ( |
| T1044 | 1057-1060 | NN | denotes | Ser |
| T1045 | 1060-1061 | -RRB- | denotes | ) |
| T1046 | 1062-1065 | CC | denotes | and |
| T1047 | 1066-1075 | NN | denotes | threonine |
| T1048 | 1076-1077 | -LRB- | denotes | ( |
| T1049 | 1077-1080 | NN | denotes | Thr |
| T1050 | 1080-1081 | -RRB- | denotes | ) |
| T1051 | 1082-1090 | NNS | denotes | residues |
| T1052 | 1091-1093 | IN | denotes | by |
| T1053 | 1094-1097 | DT | denotes | the |
| T1054 | 1098-1106 | NN | denotes | addition |
| T1055 | 1107-1109 | IN | denotes | of |
| T1056 | 1110-1112 | DT | denotes | an |
| T1057 | 1113-1121 | NN | denotes | N-acetyl |
| T1058 | 1122-1135 | NN | denotes | galactosamine |
| T1059 | 1136-1137 | -LRB- | denotes | ( |
| T1060 | 1137-1143 | NN | denotes | GalNAc |
| T1061 | 1143-1144 | -RRB- | denotes | ) |
| T1062 | 1146-1149 | IN | denotes | For |
| T1063 | 1150-1157 | NN | denotes | example |
| T1064 | 1157-1158 | -COMMA- | denotes | , |
| T1065 | 1159-1168 | NNS | denotes | N-glycans |
| T1066 | 1169-1174 | VBP | denotes | exist |
| T1067 | 1175-1177 | IN | denotes | in |
| T1068 | 1178-1184 | NNP | denotes | Hendra |
| T1069 | 1185-1190 | NN | denotes | virus |
| T1070 | 1190-1191 | -COMMA- | denotes | , |
| T1071 | 1192-1200 | NN | denotes | SARS-CoV |
| T1072 | 1200-1201 | -COMMA- | denotes | , |
| T1073 | 1202-1211 | NN | denotes | influenza |
| T1074 | 1212-1217 | NN | denotes | virus |
| T1075 | 1217-1218 | -COMMA- | denotes | , |
| T1076 | 1219-1228 | NN | denotes | hepatitis |
| T1077 | 1229-1234 | NN | denotes | virus |
| T1078 | 1234-1235 | -COMMA- | denotes | , |
| T1079 | 1236-1241 | NN | denotes | HIV-1 |
| T1080 | 1241-1242 | -COMMA- | denotes | , |
| T1081 | 1243-1246 | CC | denotes | and |
| T1082 | 1247-1251 | NNP | denotes | West |
| T1083 | 1252-1256 | NNP | denotes | Nile |
| T1084 | 1257-1262 | NN | denotes | virus |
| T1085 | 1263-1264 | -LRB- | denotes | [ |
| T1086 | 1264-1265 | CD | denotes | 6 |
| T1087 | 1265-1266 | -RRB- | denotes | ] |
| T1088 | 1266-1267 | -COMMA- | denotes | , |
| T1089 | 1268-1271 | CC | denotes | and |
| T1090 | 1272-1281 | NNS | denotes | O-glycans |
| T1091 | 1282-1286 | VBP | denotes | have |
| T1092 | 1287-1295 | VBN | denotes | occurred |
| T1093 | 1296-1298 | IN | denotes | in |
| T1094 | 1299-1302 | DT | denotes | the |
| T1095 | 1303-1308 | NNP | denotes | Ebola |
| T1096 | 1309-1314 | NN | denotes | virus |
| T1097 | 1316-1319 | DT | denotes | The |
| T1098 | 1320-1329 | JJ | denotes | 2019-nCoV |
| T1099 | 1330-1331 | NN | denotes | S |
| T1100 | 1332-1339 | NN | denotes | protein |
| T1101 | 1340-1348 | VBZ | denotes | includes |
| T1102 | 1349-1351 | CD | denotes | 13 |
| T1103 | 1352-1355 | CC | denotes | and |
| T1104 | 1356-1365 | JJ | denotes | 9N-linked |
| T1105 | 1366-1379 | NN | denotes | glycosylation |
| T1106 | 1380-1387 | NNS | denotes | sequons |
| T1107 | 1388-1390 | IN | denotes | in |
| T1108 | 1391-1394 | DT | denotes | the |
| T1109 | 1395-1397 | NN | denotes | S1 |
| T1110 | 1398-1401 | CC | denotes | and |
| T1111 | 1402-1404 | NN | denotes | S2 |
| T1112 | 1405-1412 | NN | denotes | subunit |
| T1113 | 1412-1413 | -COMMA- | denotes | , |
| T1114 | 1414-1426 | RB | denotes | respectively |
| T1115 | 1427-1428 | -LRB- | denotes | [ |
| T1116 | 1428-1429 | CD | denotes | 3 |
| T1117 | 1429-1430 | -RRB- | denotes | ] |
| T1118 | 1432-1435 | DT | denotes | All |
| T1119 | 1436-1438 | IN | denotes | of |
| T1120 | 1439-1444 | DT | denotes | these |
| T1121 | 1445-1449 | VBP | denotes | have |
| T1122 | 1450-1460 | RB | denotes | previously |
| T1123 | 1461-1469 | VBD | denotes | occurred |
| T1124 | 1470-1472 | IN | denotes | in |
| T1125 | 1473-1476 | DT | denotes | the |
| T1126 | 1477-1485 | JJ | denotes | SARS-CoV |
| T1127 | 1486-1487 | NN | denotes | S |
| T1128 | 1488-1500 | NN | denotes | glycoprotein |
| T1129 | 1500-1501 | -COMMA- | denotes | , |
| T1130 | 1502-1508 | IN | denotes | except |
| T1131 | 1509-1512 | IN | denotes | for |
| T1132 | 1513-1524 | JJ | denotes | four-linked |
| T1133 | 1525-1538 | NN | denotes | glycosylation |
| T1134 | 1539-1546 | NNS | denotes | sequons |
| T1135 | 1547-1549 | IN | denotes | in |
| T1136 | 1550-1553 | DT | denotes | the |
| T1137 | 1554-1556 | NN | denotes | S1 |
| T1138 | 1558-1562 | RB | denotes | Also |
| T1139 | 1562-1563 | -COMMA- | denotes | , |
| T1140 | 1564-1567 | JJ | denotes | due |
| T1141 | 1568-1570 | TO | denotes | to |
| T1142 | 1571-1574 | DT | denotes | the |
| T1143 | 1575-1584 | NN | denotes | existence |
| T1144 | 1585-1587 | IN | denotes | of |
| T1145 | 1588-1590 | DT | denotes | an |
| T1146 | 1591-1596 | JJ | denotes | amino |
| T1147 | 1597-1601 | NN | denotes | acid |
| T1148 | 1602-1609 | NN | denotes | proline |
| T1149 | 1610-1612 | IN | denotes | in |
| T1150 | 1613-1616 | DT | denotes | the |
| T1151 | 1617-1626 | JJ | denotes | polybasic |
| T1152 | 1627-1635 | NN | denotes | cleavage |
| T1153 | 1636-1640 | NN | denotes | site |
| T1154 | 1640-1641 | -COMMA- | denotes | , |
| T1155 | 1642-1647 | WDT | denotes | which |
| T1156 | 1648-1653 | VBZ | denotes | makes |
| T1157 | 1654-1657 | DT | denotes | the |
| T1158 | 1658-1666 | VBN | denotes | inserted |
| T1159 | 1667-1675 | NN | denotes | sequence |
| T1160 | 1676-1680 | NN | denotes | PRRA |
| T1161 | 1680-1681 | -COMMA- | denotes | , |
| T1162 | 1682-1687 | EX | denotes | there |
| T1163 | 1688-1691 | VBP | denotes | are |
| T1164 | 1692-1697 | CD | denotes | three |
| T1165 | 1698-1706 | JJ | denotes | O-linked |
| T1166 | 1707-1714 | NNS | denotes | glycans |
| T1167 | 1715-1725 | VBN | denotes | introduced |
| T1168 | 1726-1728 | TO | denotes | to |
| T1169 | 1729-1732 | DT | denotes | the |
| T1170 | 1733-1742 | JJ | denotes | 2019-nCoV |
| T1171 | 1743-1746 | NN | denotes | RBD |
| T1172 | 1747-1755 | NNS | denotes | residues |
| T1173 | 1756-1760 | NN | denotes | S673 |
| T1174 | 1760-1761 | -COMMA- | denotes | , |
| T1175 | 1762-1766 | NN | denotes | T678 |
| T1176 | 1766-1767 | -COMMA- | denotes | , |
| T1177 | 1768-1771 | CC | denotes | and |
| T1178 | 1772-1776 | NN | denotes | S686 |
| T1179 | 1777-1778 | -LRB- | denotes | [ |
| T1180 | 1778-1779 | CD | denotes | 7 |
| T1181 | 1779-1780 | -RRB- | denotes | ] |
| R965 | T971 | T972 | arg1Of | target,for |
| R966 | T974 | T972 | arg2Of | design,for |
| R967 | T974 | T973 | arg1Of | design,vaccine |
| R968 | T977 | T975 | arg1Of | types,Two |
| R1036 | T1042 | T1043 | arg1Of | serine,( |
| R1037 | T1044 | T1043 | arg2Of | Ser,( |
| R1038 | T1045 | T1043 | arg3Of | ),( |
| R1039 | T1042 | T1046 | arg1Of | serine,and |
| R1040 | T1047 | T1046 | arg2Of | threonine,and |
| R1041 | T1051 | T1047 | arg1Of | residues,threonine |
| R1042 | T1047 | T1048 | arg1Of | threonine,( |
| R1043 | T1049 | T1048 | arg2Of | Thr,( |
| R1044 | T1050 | T1048 | arg3Of | ),( |
| R1045 | T1037 | T1052 | arg1Of | attached,by |
| R1046 | T1054 | T1052 | arg2Of | addition,by |
| R1047 | T1054 | T1053 | arg1Of | addition,the |
| R1048 | T1054 | T1055 | arg1Of | addition,of |
| R1049 | T1058 | T1055 | arg2Of | galactosamine,of |
| R1050 | T1058 | T1056 | arg1Of | galactosamine,an |
| R1091 | T1100 | T1098 | arg1Of | protein,2019-nCoV |
| R1092 | T1100 | T1099 | arg1Of | protein,S |
| R1093 | T1100 | T1101 | arg1Of | protein,includes |
| R1094 | T1106 | T1101 | arg2Of | sequons,includes |
| R871 | T874 | T873 | arg1Of | Glycosylation,3.1.2 |
| R872 | T875 | T876 | arg1Of | Glycosylation,and |
| R873 | T882 | T876 | arg2Of | ",",and |
| R874 | T882 | T877 | arg1Of | ",",its |
| R875 | T879 | T878 | arg1Of | products,related |
| R876 | T879 | T880 | arg1Of | products,"," |
| R877 | T879 | T881 | arg1Of | products,i.e. |
| R878 | T879 | T882 | arg1Of | products,"," |
| R879 | T883 | T882 | arg2Of | glycans,"," |
| R880 | T885 | T884 | arg1Of | introduce,"," |
| R881 | T876 | T885 | arg1Of | and,introduce |
| R882 | T886 | T885 | arg2Of | changes,introduce |
| R883 | T886 | T887 | arg1Of | changes,to |
| R884 | T890 | T887 | arg2Of | envelope,to |
| R885 | T890 | T888 | arg1Of | envelope,the |
| R886 | T890 | T889 | arg1Of | envelope,viral |
| R887 | T886 | T891 | arg1Of | changes,that |
| R888 | T886 | T892 | arg1Of | changes,make |
| R889 | T894 | T892 | arg2Of | virus,make |
| R890 | T894 | T893 | arg1Of | virus,the |
| R891 | T894 | T895 | arg2Of | virus,fitted |
| R892 | T895 | T896 | arg1Of | fitted,for |
| R893 | T897 | T896 | arg2Of | interaction,for |
| R894 | T897 | T898 | arg1Of | interaction,with |
| R895 | T902 | T898 | arg2Of | membrane,with |
| R896 | T902 | T899 | arg1Of | membrane,the |
| R897 | T902 | T900 | arg1Of | membrane,host |
| R898 | T902 | T901 | arg1Of | membrane,cell |
| R899 | T902 | T903 | arg1Of | membrane,[ |
| R900 | T904 | T903 | arg2Of | 5,[ |
| R901 | T905 | T903 | arg3Of | ],[ |
| R902 | T909 | T906 | arg1Of | are,Generally |
| R903 | T909 | T907 | arg1Of | are,"," |
| R904 | T908 | T909 | arg1Of | glycans,are |
| R905 | T910 | T909 | arg2Of | oligosaccharides,are |
| R906 | T910 | T911 | arg2Of | oligosaccharides,linked |
| R907 | T911 | T912 | arg1Of | linked,to |
| R908 | T915 | T912 | arg2Of | decoration,to |
| R909 | T915 | T913 | arg1Of | decoration,the |
| R910 | T915 | T914 | arg1Of | decoration,dense |
| R911 | T915 | T916 | arg1Of | decoration,of |
| R912 | T919 | T916 | arg2Of | glycoprotein,of |
| R913 | T919 | T917 | arg1Of | glycoprotein,the |
| R914 | T919 | T918 | arg1Of | glycoprotein,spike |
| R915 | T926 | T920 | arg1Of | shown,In |
| R916 | T921 | T920 | arg2Of | particular,In |
| R917 | T926 | T922 | arg1Of | shown,"," |
| R918 | T924 | T923 | arg1Of | oligosaccharides,these |
| R919 | T924 | T925 | arg1Of | oligosaccharides,have |
| R920 | T926 | T925 | arg2Of | shown,have |
| R921 | T924 | T926 | arg1Of | oligosaccharides,shown |
| R922 | T928 | T927 | arg1Of | influence,to |
| R923 | T926 | T927 | modOf | shown,to |
| R924 | T930 | T928 | arg2Of | folding,influence |
| R925 | T930 | T929 | arg1Of | folding,the |
| R926 | T930 | T931 | arg1Of | folding,of |
| R927 | T935 | T931 | arg2Of | and,of |
| R928 | T935 | T932 | arg1Of | and,the |
| R929 | T934 | T933 | arg1Of | protein,S |
| R930 | T934 | T935 | arg1Of | protein,and |
| R931 | T937 | T935 | arg2Of | process,and |
| R932 | T937 | T936 | arg1Of | process,proteolytic |
| R933 | T928 | T938 | arg1Of | influence,so |
| R934 | T941 | T938 | arg2Of | facilitate,so |
| R935 | T938 | T939 | arg1Of | so,that |
| R936 | T940 | T941 | arg1Of | they,facilitate |
| R937 | T945 | T941 | arg2Of | entry,facilitate |
| R938 | T945 | T942 | arg1Of | entry,the |
| R939 | T945 | T943 | arg1Of | entry,virus |
| R940 | T945 | T944 | arg1Of | entry,cell |
| R941 | T954 | T946 | arg1Of | gains,Moreover |
| R942 | T954 | T947 | arg1Of | gains,"," |
| R943 | T949 | T948 | arg1Of | virus,a |
| R944 | T949 | T950 | arg1Of | virus,with |
| R945 | T953 | T950 | arg2Of | glycoprotein,with |
| R946 | T953 | T951 | arg1Of | glycoprotein,the |
| R947 | T953 | T952 | arg2Of | glycoprotein,glycosylated |
| R948 | T949 | T954 | arg1Of | virus,gains |
| R949 | T957 | T954 | arg2Of | feature,gains |
| R950 | T957 | T955 | arg1Of | feature,an |
| R951 | T957 | T956 | arg1Of | feature,extra |
| R952 | T957 | T958 | arg1Of | feature,for |
| R953 | T960 | T958 | arg2Of | escape,for |
| R954 | T960 | T959 | arg1Of | escape,an |
| R955 | T960 | T961 | arg1Of | escape,from |
| R956 | T964 | T961 | arg2Of | responses,from |
| R957 | T964 | T962 | arg1Of | responses,the |
| R958 | T964 | T963 | arg1Of | responses,immune |
| R959 | T968 | T965 | arg1Of | are,Therefore |
| R960 | T968 | T966 | arg1Of | are,"," |
| R961 | T967 | T968 | arg1Of | glycans,are |
| R962 | T971 | T968 | arg2Of | target,are |
| R963 | T971 | T969 | arg1Of | target,a |
| R964 | T971 | T970 | arg1Of | target,good |
| R969 | T977 | T976 | arg1Of | types,main |
| R970 | T977 | T978 | arg1Of | types,of |
| R971 | T979 | T978 | arg2Of | glycans,of |
| R972 | T977 | T980 | arg1Of | types,are |
| R973 | T981 | T980 | arg2Of | N-linked,are |
| R974 | T977 | T981 | arg2Of | types,N-linked |
| R975 | T984 | T981 | arg3Of | glycans,N-linked |
| R976 | T984 | T982 | arg1Of | glycans,and |
| R977 | T984 | T983 | arg1Of | glycans,O-linked |
| R978 | T985 | T986 | arg1Of | Both,are |
| R979 | T987 | T986 | arg2Of | released,are |
| R980 | T985 | T987 | arg2Of | Both,released |
| R981 | T987 | T988 | arg1Of | released,from |
| R982 | T989 | T988 | arg2Of | glycoproteins,from |
| R983 | T1000 | T990 | arg1Of | perform,Whereas |
| R984 | T992 | T990 | arg2Of | fulfill,Whereas |
| R985 | T991 | T992 | arg1Of | enzymes,fulfill |
| R986 | T994 | T992 | arg2Of | construction,fulfill |
| R987 | T994 | T993 | arg1Of | construction,the |
| R988 | T994 | T995 | arg1Of | construction,of |
| R989 | T996 | T995 | arg2Of | N-glycans,of |
| R990 | T1000 | T997 | arg1Of | perform,"," |
| R991 | T999 | T998 | arg1Of | methods,chemical |
| R992 | T999 | T1000 | arg1Of | methods,perform |
| R993 | T1002 | T1000 | arg2Of | release,perform |
| R994 | T1002 | T1001 | arg1Of | release,the |
| R995 | T1002 | T1003 | arg1Of | release,of |
| R996 | T1004 | T1003 | arg2Of | O-glycans,of |
| R997 | T1005 | T1006 | arg1Of | N-glycans,are |
| R998 | T1007 | T1006 | arg2Of | linked,are |
| R999 | T1005 | T1007 | arg2Of | N-glycans,linked |
| R1000 | T1007 | T1008 | arg1Of | linked,to |
| R1001 | T1016 | T1008 | arg2Of | residues,to |
| R1002 | T1016 | T1009 | arg1Of | residues,the |
| R1003 | T1016 | T1010 | arg1Of | residues,amino |
| R1004 | T1016 | T1011 | arg1Of | residues,acid |
| R1005 | T1016 | T1012 | arg1Of | residues,asparagine |
| R1006 | T1016 | T1013 | arg1Of | residues,( |
| R1007 | T1014 | T1013 | arg2Of | Asn,( |
| R1008 | T1015 | T1013 | arg3Of | ),( |
| R1009 | T1016 | T1017 | arg1Of | residues,( |
| R1010 | T1020 | T1017 | arg2Of | acids,( |
| R1011 | T1027 | T1017 | arg3Of | ),( |
| R1012 | T1020 | T1018 | arg1Of | acids,Asn-any |
| R1013 | T1020 | T1019 | arg1Of | acids,amino |
| R1014 | T1022 | T1021 | arg1Of | for,except |
| R1015 | T1020 | T1022 | arg1Of | acids,for |
| R1016 | T1025 | T1022 | arg2Of | or,for |
| R1017 | T1025 | T1023 | arg1Of | or,proline- |
| R1018 | T1024 | T1025 | arg1Of | Ser,or |
| R1019 | T1026 | T1025 | arg2Of | Thr,or |
| R1020 | T1016 | T1028 | arg1Of | residues,utilizing |
| R1021 | T1031 | T1028 | arg2Of | bond,utilizing |
| R1022 | T1031 | T1029 | arg1Of | bond,an |
| R1023 | T1031 | T1030 | arg1Of | bond,N-glycosidic |
| R1024 | T1031 | T1032 | arg1Of | bond,"," |
| R1025 | T1034 | T1032 | arg2Of | N-acetylglucosamine,"," |
| R1026 | T1034 | T1033 | arg1Of | N-acetylglucosamine,mostly |
| R1027 | T1035 | T1036 | arg1Of | O-glycans,are |
| R1028 | T1037 | T1036 | arg2Of | attached,are |
| R1029 | T1035 | T1037 | arg2Of | O-glycans,attached |
| R1030 | T1037 | T1038 | arg1Of | attached,to |
| R1031 | T1051 | T1038 | arg2Of | residues,to |
| R1032 | T1051 | T1039 | arg1Of | residues,the |
| R1033 | T1042 | T1040 | arg1Of | serine,amino |
| R1034 | T1042 | T1041 | arg1Of | serine,acid |
| R1035 | T1051 | T1042 | arg1Of | residues,serine |
| R1051 | T1058 | T1057 | arg1Of | galactosamine,N-acetyl |
| R1052 | T1058 | T1059 | arg1Of | galactosamine,( |
| R1053 | T1060 | T1059 | arg2Of | GalNAc,( |
| R1054 | T1061 | T1059 | arg3Of | ),( |
| R1055 | T1089 | T1062 | arg1Of | and,For |
| R1056 | T1063 | T1062 | arg2Of | example,For |
| R1057 | T1089 | T1064 | arg1Of | and,"," |
| R1058 | T1065 | T1066 | arg1Of | N-glycans,exist |
| R1059 | T1066 | T1067 | arg1Of | exist,in |
| R1060 | T1081 | T1067 | arg2Of | and,in |
| R1061 | T1069 | T1068 | arg1Of | virus,Hendra |
| R1062 | T1069 | T1070 | arg1Of | virus,"," |
| R1063 | T1071 | T1070 | arg2Of | SARS-CoV,"," |
| R1064 | T1070 | T1072 | arg1Of | ",","," |
| R1065 | T1074 | T1072 | arg2Of | virus,"," |
| R1066 | T1074 | T1073 | arg1Of | virus,influenza |
| R1067 | T1072 | T1075 | arg1Of | ",","," |
| R1068 | T1077 | T1075 | arg2Of | virus,"," |
| R1069 | T1077 | T1076 | arg1Of | virus,hepatitis |
| R1070 | T1075 | T1078 | arg1Of | ",","," |
| R1071 | T1079 | T1078 | arg2Of | HIV-1,"," |
| R1072 | T1081 | T1080 | arg1Of | and,"," |
| R1073 | T1078 | T1081 | arg1Of | ",",and |
| R1074 | T1084 | T1081 | arg2Of | virus,and |
| R1075 | T1083 | T1082 | arg1Of | Nile,West |
| R1076 | T1084 | T1083 | arg1Of | virus,Nile |
| R1077 | T1084 | T1085 | arg1Of | virus,[ |
| R1078 | T1086 | T1085 | arg2Of | 6,[ |
| R1079 | T1087 | T1085 | arg3Of | ],[ |
| R1080 | T1089 | T1088 | arg1Of | and,"," |
| R1081 | T1066 | T1089 | arg1Of | exist,and |
| R1082 | T1092 | T1089 | arg2Of | occurred,and |
| R1083 | T1090 | T1091 | arg1Of | O-glycans,have |
| R1084 | T1092 | T1091 | arg2Of | occurred,have |
| R1085 | T1090 | T1092 | arg1Of | O-glycans,occurred |
| R1086 | T1092 | T1093 | arg1Of | occurred,in |
| R1087 | T1096 | T1093 | arg2Of | virus,in |
| R1088 | T1096 | T1094 | arg1Of | virus,the |
| R1089 | T1096 | T1095 | arg1Of | virus,Ebola |
| R1090 | T1100 | T1097 | arg1Of | protein,The |
| R1095 | T1106 | T1102 | arg1Of | sequons,13 |
| R1096 | T1106 | T1103 | arg1Of | sequons,and |
| R1097 | T1106 | T1104 | arg1Of | sequons,9N-linked |
| R1098 | T1106 | T1105 | arg1Of | sequons,glycosylation |
| R1099 | T1106 | T1107 | arg1Of | sequons,in |
| R1100 | T1112 | T1107 | arg2Of | subunit,in |
| R1101 | T1112 | T1108 | arg1Of | subunit,the |
| R1102 | T1112 | T1109 | arg1Of | subunit,S1 |
| R1103 | T1109 | T1110 | arg1Of | S1,and |
| R1104 | T1111 | T1110 | arg2Of | S2,and |
| R1105 | T1112 | T1111 | arg1Of | subunit,S2 |
| R1106 | T1106 | T1113 | arg1Of | sequons,"," |
| R1107 | T1106 | T1114 | arg1Of | sequons,respectively |
| R1108 | T1101 | T1115 | arg1Of | includes,[ |
| R1109 | T1116 | T1115 | arg2Of | 3,[ |
| R1110 | T1117 | T1115 | arg3Of | ],[ |
| R1111 | T1118 | T1119 | arg1Of | All,of |
| R1112 | T1120 | T1119 | arg2Of | these,of |
| R1113 | T1118 | T1121 | arg1Of | All,have |
| R1114 | T1123 | T1121 | arg2Of | occurred,have |
| R1115 | T1123 | T1122 | arg1Of | occurred,previously |
| R1116 | T1118 | T1123 | arg1Of | All,occurred |
| R1117 | T1123 | T1124 | arg1Of | occurred,in |
| R1118 | T1128 | T1124 | arg2Of | glycoprotein,in |
| R1119 | T1128 | T1125 | arg1Of | glycoprotein,the |
| R1120 | T1128 | T1126 | arg1Of | glycoprotein,SARS-CoV |
| R1121 | T1128 | T1127 | arg1Of | glycoprotein,S |
| R1122 | T1123 | T1129 | arg1Of | occurred,"," |
| R1123 | T1131 | T1130 | arg1Of | for,except |
| R1124 | T1123 | T1131 | arg1Of | occurred,for |
| R1125 | T1134 | T1131 | arg2Of | sequons,for |
| R1126 | T1134 | T1132 | arg1Of | sequons,four-linked |
| R1127 | T1134 | T1133 | arg1Of | sequons,glycosylation |
| R1128 | T1134 | T1135 | arg1Of | sequons,in |
| R1129 | T1137 | T1135 | arg2Of | S1,in |
| R1130 | T1137 | T1136 | arg1Of | S1,the |
| R1131 | T1163 | T1138 | arg1Of | are,Also |
| R1132 | T1163 | T1139 | arg1Of | are,"," |
| R1133 | T1141 | T1140 | arg1Of | to,due |
| R1134 | T1163 | T1141 | arg1Of | are,to |
| R1135 | T1143 | T1141 | arg2Of | existence,to |
| R1136 | T1143 | T1142 | arg1Of | existence,the |
| R1137 | T1143 | T1144 | arg1Of | existence,of |
| R1138 | T1148 | T1144 | arg2Of | proline,of |
| R1139 | T1148 | T1145 | arg1Of | proline,an |
| R1140 | T1148 | T1146 | arg1Of | proline,amino |
| R1141 | T1148 | T1147 | arg1Of | proline,acid |
| R1142 | T1148 | T1149 | arg1Of | proline,in |
| R1143 | T1153 | T1149 | arg2Of | site,in |
| R1144 | T1153 | T1150 | arg1Of | site,the |
| R1145 | T1153 | T1151 | arg1Of | site,polybasic |
| R1146 | T1153 | T1152 | arg1Of | site,cleavage |
| R1147 | T1148 | T1154 | arg1Of | proline,"," |
| R1148 | T1148 | T1155 | arg1Of | proline,which |
| R1149 | T1148 | T1156 | arg1Of | proline,makes |
| R1150 | T1160 | T1156 | arg2Of | PRRA,makes |
| R1151 | T1160 | T1157 | arg1Of | PRRA,the |
| R1152 | T1160 | T1158 | arg2Of | PRRA,inserted |
| R1153 | T1160 | T1159 | arg1Of | PRRA,sequence |
| R1154 | T1163 | T1161 | arg1Of | are,"," |
| R1155 | T1162 | T1163 | arg1Of | there,are |
| R1156 | T1166 | T1163 | arg2Of | glycans,are |
| R1157 | T1166 | T1164 | arg1Of | glycans,three |
| R1158 | T1166 | T1165 | arg1Of | glycans,O-linked |
| R1159 | T1166 | T1167 | arg2Of | glycans,introduced |
| R1160 | T1167 | T1168 | arg1Of | introduced,to |
| R1161 | T1177 | T1168 | arg2Of | and,to |
| R1162 | T1177 | T1169 | arg1Of | and,the |
| R1163 | T1172 | T1170 | arg1Of | residues,2019-nCoV |
| R1164 | T1172 | T1171 | arg1Of | residues,RBD |
| R1165 | T1177 | T1172 | arg1Of | and,residues |
| R1166 | T1173 | T1174 | arg1Of | S673,"," |
| R1167 | T1175 | T1174 | arg2Of | T678,"," |
| R1168 | T1177 | T1176 | arg1Of | and,"," |
| R1169 | T1174 | T1177 | arg1Of | ",",and |
| R1170 | T1178 | T1177 | arg2Of | S686,and |
| R1171 | T1177 | T1179 | arg1Of | and,[ |
| R1172 | T1180 | T1179 | arg2Of | 7,[ |
| R1173 | T1181 | T1179 | arg3Of | ],[ |
LitCovid-sample-PD-GO-BP-0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8 | 7-20 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | Glycosylation |
| T9 | 21-34 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | Glycosylation |
| T10 | 147-172 | http://purl.obolibrary.org/obo/GO_0051701 | denotes | interaction with the host |
| T11 | 550-566 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune responses |
| T12 | 1366-1379 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
| T13 | 1525-1538 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
LitCovid-sample-PD-FMA
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T28 | 173-186 | Body_part | denotes | cell membrane | http://purl.org/sig/ont/fma/fma63841 |
| T29 | 173-177 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T30 | 215-231 | Body_part | denotes | oligosaccharides | http://purl.org/sig/ont/fma/fma82742 |
| T31 | 276-288 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T32 | 311-327 | Body_part | denotes | oligosaccharides | http://purl.org/sig/ont/fma/fma82742 |
| T33 | 373-380 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T34 | 439-443 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T35 | 491-503 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T36 | 709-722 | Body_part | denotes | glycoproteins | http://purl.org/sig/ont/fma/fma62925 |
| T37 | 858-868 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
| T38 | 904-915 | Body_part | denotes | amino acids | http://purl.org/sig/ont/fma/fma82739 |
| T39 | 927-934 | Body_part | denotes | proline | http://purl.org/sig/ont/fma/fma82761 |
| T40 | 936-939 | Body_part | denotes | Ser | http://purl.org/sig/ont/fma/fma82764 |
| T41 | 943-946 | Body_part | denotes | Thr | http://purl.org/sig/ont/fma/fma82765 |
| T42 | 987-1006 | Body_part | denotes | N-acetylglucosamine | http://purl.org/sig/ont/fma/fma82787 |
| T43 | 1038-1048 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
| T44 | 1049-1055 | Body_part | denotes | serine | http://purl.org/sig/ont/fma/fma82764 |
| T45 | 1057-1060 | Body_part | denotes | Ser | http://purl.org/sig/ont/fma/fma82764 |
| T46 | 1066-1075 | Body_part | denotes | threonine | http://purl.org/sig/ont/fma/fma82765 |
| T47 | 1077-1080 | Body_part | denotes | Thr | http://purl.org/sig/ont/fma/fma82765 |
| T48 | 1113-1135 | Body_part | denotes | N-acetyl galactosamine | http://purl.org/sig/ont/fma/fma82786 |
| T49 | 1236-1239 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
| T50 | 1332-1339 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T51 | 1488-1500 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T52 | 1591-1601 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
| T53 | 1602-1609 | Body_part | denotes | proline | http://purl.org/sig/ont/fma/fma82761 |
LitCovid-sample-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T42 | 1192-1200 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T43 | 1202-1211 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T44 | 1219-1228 | Disease | denotes | hepatitis | http://purl.obolibrary.org/obo/MONDO_0002251 |
| T45 | 1303-1308 | Disease | denotes | Ebola | http://purl.obolibrary.org/obo/MONDO_0005737 |
| T46 | 1477-1485 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-sample-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 1219-1228 | Phenotype | denotes | hepatitis | http://purl.obolibrary.org/obo/HP_0012115 |
LitCovid-sample-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 7-20 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | Glycosylation |
| T7 | 21-34 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | Glycosylation |
| T8 | 147-172 | http://purl.obolibrary.org/obo/GO_0051701 | denotes | interaction with the host |
| T9 | 550-566 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune responses |
| T10 | 1366-1379 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
| T11 | 1525-1538 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 7-20 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | Glycosylation |
| T7 | 21-34 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | Glycosylation |
| T8 | 147-172 | http://purl.obolibrary.org/obo/GO_0051701 | denotes | interaction with the host |
| T9 | 550-566 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune responses |
| T10 | 1366-1379 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
| T11 | 1525-1538 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T50 | 0-20 | Sentence | denotes | 3.1.2 Glycosylation |
| T51 | 21-191 | Sentence | denotes | Glycosylation and its related products, i.e., glycans, introduce changes to the viral envelope that make the virus fitted for interaction with the host cell membrane [5]. |
| T52 | 192-289 | Sentence | denotes | Generally, glycans are oligosaccharides linked to the dense decoration of the spike glycoprotein. |
| T53 | 290-450 | Sentence | denotes | In particular, these oligosaccharides have shown to influence the folding of the S protein and proteolytic process so that they facilitate the virus cell entry. |
| T54 | 451-567 | Sentence | denotes | Moreover, a virus with the glycosylated glycoprotein gains an extra feature for an escape from the immune responses. |
| T55 | 568-624 | Sentence | denotes | Therefore, glycans are a good target for vaccine design. |
| T56 | 625-685 | Sentence | denotes | Two main types of glycans are N-linked and O-linked glycans. |
| T57 | 686-723 | Sentence | denotes | Both are released from glycoproteins. |
| T58 | 724-829 | Sentence | denotes | Whereas enzymes fulfill the construction of N-glycans, chemical methods perform the release of O-glycans. |
| T59 | 830-1007 | Sentence | denotes | N-glycans are linked to the amino acid asparagine (Asn) residues (Asn-any amino acids except for proline- Ser or Thr) utilizing an N-glycosidic bond, mostly N-acetylglucosamine. |
| T60 | 1008-1145 | Sentence | denotes | O-glycans are attached to the amino acid serine (Ser) and threonine (Thr) residues by the addition of an N-acetyl galactosamine (GalNAc). |
| T61 | 1146-1315 | Sentence | denotes | For example, N-glycans exist in Hendra virus, SARS-CoV, influenza virus, hepatitis virus, HIV-1, and West Nile virus [6], and O-glycans have occurred in the Ebola virus. |
| T62 | 1316-1431 | Sentence | denotes | The 2019-nCoV S protein includes 13 and 9N-linked glycosylation sequons in the S1 and S2 subunit, respectively [3]. |
| T63 | 1432-1557 | Sentence | denotes | All of these have previously occurred in the SARS-CoV S glycoprotein, except for four-linked glycosylation sequons in the S1. |
| T64 | 1558-1781 | Sentence | denotes | Also, due to the existence of an amino acid proline in the polybasic cleavage site, which makes the inserted sequence PRRA, there are three O-linked glycans introduced to the 2019-nCoV RBD residues S673, T678, and S686 [7]. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 1219-1228 | Phenotype | denotes | hepatitis | http://purl.obolibrary.org/obo/HP_0012115 |
LitCovid-sample-Glycan
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 943-946 | https://glytoucan.org/Structures/Glycans/G69371PB | denotes | Thr |
| T2 | 943-946 | https://glytoucan.org/Structures/Glycans/G00134PL | denotes | Thr |
| T3 | 943-946 | https://glytoucan.org/Structures/Glycans/G52865ZM | denotes | Thr |
| T4 | 943-946 | https://glytoucan.org/Structures/Glycans/G50601AY | denotes | Thr |
| T5 | 943-946 | https://glytoucan.org/Structures/Glycans/G27898GL | denotes | Thr |
| T6 | 943-946 | https://glytoucan.org/Structures/Glycans/G90753WM | denotes | Thr |
| T7 | 943-946 | https://glytoucan.org/Structures/Glycans/G57814GP | denotes | Thr |
| T8 | 943-946 | https://glytoucan.org/Structures/Glycans/G42918SL | denotes | Thr |
| T9 | 943-946 | https://glytoucan.org/Structures/Glycans/G81521LC | denotes | Thr |
| T10 | 943-946 | https://glytoucan.org/Structures/Glycans/G19289PT | denotes | Thr |
| T11 | 943-946 | https://glytoucan.org/Structures/Glycans/G23779KC | denotes | Thr |
| T12 | 943-946 | https://glytoucan.org/Structures/Glycans/G94729UX | denotes | Thr |
| T13 | 943-946 | https://glytoucan.org/Structures/Glycans/G49708JS | denotes | Thr |
| T14 | 943-946 | https://glytoucan.org/Structures/Glycans/G60349YI | denotes | Thr |
| T15 | 943-946 | https://glytoucan.org/Structures/Glycans/G63317ON | denotes | Thr |
| T16 | 943-946 | https://glytoucan.org/Structures/Glycans/G71284FA | denotes | Thr |
| T17 | 943-946 | https://glytoucan.org/Structures/Glycans/G42091PK | denotes | Thr |
| T18 | 943-946 | https://glytoucan.org/Structures/Glycans/G39722QK | denotes | Thr |
| T19 | 943-946 | https://glytoucan.org/Structures/Glycans/G76637LW | denotes | Thr |
| T20 | 943-946 | https://glytoucan.org/Structures/Glycans/G46130CG | denotes | Thr |
| T21 | 943-946 | https://glytoucan.org/Structures/Glycans/G05333AM | denotes | Thr |
| T22 | 943-946 | https://glytoucan.org/Structures/Glycans/G77428YW | denotes | Thr |
| T23 | 943-946 | https://glytoucan.org/Structures/Glycans/G15142RK | denotes | Thr |
| T24 | 943-946 | https://glytoucan.org/Structures/Glycans/G06824UZ | denotes | Thr |
| T25 | 943-946 | https://glytoucan.org/Structures/Glycans/G48723MN | denotes | Thr |
| T26 | 943-946 | https://glytoucan.org/Structures/Glycans/G35093GE | denotes | Thr |
| T27 | 943-946 | https://glytoucan.org/Structures/Glycans/G34845TQ | denotes | Thr |
| T28 | 943-946 | https://glytoucan.org/Structures/Glycans/G71815PL | denotes | Thr |
| T29 | 943-946 | https://glytoucan.org/Structures/Glycans/G97173UR | denotes | Thr |
| T30 | 943-946 | https://glytoucan.org/Structures/Glycans/G53453JD | denotes | Thr |
| T31 | 943-946 | https://glytoucan.org/Structures/Glycans/G81407LL | denotes | Thr |
| T32 | 943-946 | https://glytoucan.org/Structures/Glycans/G46430YF | denotes | Thr |
| T33 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G69371PB | denotes | Thr |
| T34 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G00134PL | denotes | Thr |
| T35 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G52865ZM | denotes | Thr |
| T36 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G50601AY | denotes | Thr |
| T37 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G27898GL | denotes | Thr |
| T38 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G90753WM | denotes | Thr |
| T39 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G57814GP | denotes | Thr |
| T40 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G42918SL | denotes | Thr |
| T41 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G81521LC | denotes | Thr |
| T42 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G19289PT | denotes | Thr |
| T43 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G23779KC | denotes | Thr |
| T44 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G94729UX | denotes | Thr |
| T45 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G49708JS | denotes | Thr |
| T46 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G60349YI | denotes | Thr |
| T47 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G63317ON | denotes | Thr |
| T48 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G71284FA | denotes | Thr |
| T49 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G42091PK | denotes | Thr |
| T50 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G39722QK | denotes | Thr |
| T51 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G76637LW | denotes | Thr |
| T52 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G46130CG | denotes | Thr |
| T53 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G05333AM | denotes | Thr |
| T54 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G77428YW | denotes | Thr |
| T55 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G15142RK | denotes | Thr |
| T56 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G06824UZ | denotes | Thr |
| T57 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G48723MN | denotes | Thr |
| T58 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G35093GE | denotes | Thr |
| T59 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G34845TQ | denotes | Thr |
| T60 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G71815PL | denotes | Thr |
| T61 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G97173UR | denotes | Thr |
| T62 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G53453JD | denotes | Thr |
| T63 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G81407LL | denotes | Thr |
| T64 | 1077-1080 | https://glytoucan.org/Structures/Glycans/G46430YF | denotes | Thr |
| T65 | 1122-1135 | http://rdf.glyconavi.org/CarTNa/CarTNa205/trivialname | denotes | galactosamine |
| T66 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G23425WZ | denotes | GalNAc |
| T67 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G02874VH | denotes | GalNAc |
| T68 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G99699DW | denotes | GalNAc |
| T69 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G22074RM | denotes | GalNAc |
| T70 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G48535VZ | denotes | GalNAc |
| T71 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G39738WL | denotes | GalNAc |
| T72 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G42313WU | denotes | GalNAc |
| T73 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G00393CK | denotes | GalNAc |
| T74 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G46880SB | denotes | GalNAc |
| T75 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G42649EX | denotes | GalNAc |
| T76 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G75599IR | denotes | GalNAc |
| T77 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G58985MU | denotes | GalNAc |
| T78 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G92517PO | denotes | GalNAc |
| T79 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G41473NX | denotes | GalNAc |
| T80 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G71089RB | denotes | GalNAc |
| T81 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G88512YL | denotes | GalNAc |
| T82 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G73485GZ | denotes | GalNAc |
| T83 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G61406KC | denotes | GalNAc |
| T84 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G34412GZ | denotes | GalNAc |
| T85 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G61442IL | denotes | GalNAc |
| T86 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G93729MV | denotes | GalNAc |
| T87 | 1137-1143 | https://glytoucan.org/Structures/Glycans/G92144AE | denotes | GalNAc |
| T88 | 1137-1143 | http://rdf.glyconavi.org/CarTNa/CarTNa205/trivialname | denotes | GalNAc |
| T89 | 1432-1435 | https://glytoucan.org/Structures/Glycans/G05518TD | denotes | All |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32413736-29579213-48112967 | 188-189 | 29579213 | denotes | 5 |
| 32413736-17398101-48112968 | 1264-1265 | 17398101 | denotes | 6 |
| T49497 | 188-189 | 29579213 | denotes | 5 |
| T80973 | 1264-1265 | 17398101 | denotes | 6 |