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PMC:7205724 / 5112-5336 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
165 50-55 Gene denotes furin Gene:5045
169 36-42 Species denotes APMV-7 Tax:622416
170 142-149 Species denotes chicken Tax:9031
171 187-196 Disease denotes infection MESH:D007239

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T27 118-122 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T41 187-196 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T60 95-104 http://purl.obolibrary.org/obo/CL_0000228 denotes syncytium
T61 118-122 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T62 142-149 http://purl.obolibrary.org/obo/NCBITaxon_9031 denotes chicken
T63 165-170 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus

LitCovid-sample-MedDRA

Id Subject Object Predicate Lexical cue meddra_id
T5 123-131 http://purl.bioontology.org/ontology/MEDDRA/10022891 denotes cultures http://purl.bioontology.org/ontology/MEDDRA/10061447

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T21 10-14 http://purl.obolibrary.org/obo/BFO_0000029 denotes site
T22 79-90 http://purl.obolibrary.org/obo/IDO_0000608 denotes replication
T23 118-122 http://purl.obolibrary.org/obo/CL_0000000 denotes cell
T24 165-170 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T25 187-196 http://purl.obolibrary.org/obo/IDO_0000586 denotes infection

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T50 36-42 Species denotes APMV-7 NCBItxid:2560317
T51 142-149 Species denotes chicken NCBItxid:9031

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T48 20-132 Sentence denotes The constructed APMV-7 showed furin cleavage and increased replication and syncytium formation in cell cultures.
T49 133-197 Sentence denotes However, chicken exposed to the virus did not exhibit infection.
T50 199-219 Sentence denotes 3.1.2 Glycosylation

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
165 50-55 Gene denotes furin Gene:5045
170 142-149 Species denotes chicken Tax:9031
171 187-196 Disease denotes infection MESH:D007239
169 36-42 Species denotes APMV-7 Tax:622416

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T588 50-55 Protein denotes furin https://www.uniprot.org/uniprot/Q9UCZ5|https://www.uniprot.org/uniprot/Q6LBS3|https://www.uniprot.org/uniprot/Q6GTN6|https://www.uniprot.org/uniprot/Q28193|https://www.uniprot.org/uniprot/Q14336|https://www.uniprot.org/uniprot/P23377|https://www.uniprot.org/uniprot/P23188|https://www.uniprot.org/uniprot/P09958

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T842 1-9 NN denotes cleavage
T843 10-14 NN denotes site
T844 15-16 -LRB- denotes [
T845 16-17 CD denotes 4
T846 17-18 -RRB- denotes ]
T847 20-23 DT denotes The
T848 24-35 VBN denotes constructed
T849 36-42 NN denotes APMV-7
T850 43-49 VBD denotes showed
T851 50-55 NN denotes furin
T852 56-64 NN denotes cleavage
T853 65-68 CC denotes and
T854 69-78 VBD denotes increased
T855 79-90 NN denotes replication
T856 91-94 CC denotes and
T857 95-104 NN denotes syncytium
T858 105-114 NN denotes formation
T859 115-117 IN denotes in
T860 118-122 NN denotes cell
T861 123-131 NNS denotes cultures
T862 133-140 RB denotes However
T863 140-141 -COMMA- denotes ,
T864 142-149 NN denotes chicken
T865 150-157 VBN denotes exposed
T866 158-160 TO denotes to
T867 161-164 DT denotes the
T868 165-170 NN denotes virus
T869 171-174 VBD denotes did
T870 175-178 RB denotes not
T871 179-186 VB denotes exhibit
T872 187-196 NN denotes infection
T873 199-204 CD denotes 3.1.2
T874 206-219 NN denotes Glycosylation
R841 T843 T842 arg1Of site,cleavage
R843 T845 T844 arg2Of 4,[
R844 T846 T844 arg3Of ],[
R845 T849 T847 arg1Of APMV-7,The
R846 T849 T848 arg2Of APMV-7,constructed
R847 T849 T850 arg1Of APMV-7,showed
R848 T852 T850 arg2Of cleavage,showed
R849 T852 T851 arg1Of cleavage,furin
R850 T850 T853 arg1Of showed,and
R851 T854 T853 arg2Of increased,and
R852 T849 T854 arg1Of APMV-7,increased
R853 T856 T854 arg2Of and,increased
R854 T855 T856 arg1Of replication,and
R855 T858 T856 arg2Of formation,and
R856 T858 T857 arg1Of formation,syncytium
R857 T854 T859 arg1Of increased,in
R858 T861 T859 arg2Of cultures,in
R859 T861 T860 arg1Of cultures,cell
R860 T871 T862 arg1Of exhibit,However
R861 T871 T863 arg1Of exhibit,","
R862 T864 T865 arg2Of chicken,exposed
R863 T865 T866 arg1Of exposed,to
R864 T868 T866 arg2Of virus,to
R865 T868 T867 arg1Of virus,the
R866 T864 T869 arg1Of chicken,did
R867 T871 T869 arg2Of exhibit,did
R868 T871 T870 arg1Of exhibit,not
R869 T864 T871 arg1Of chicken,exhibit
R870 T872 T871 arg2Of infection,exhibit
R871 T874 T873 arg1Of Glycosylation,3.1.2

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T6 95-114 http://purl.obolibrary.org/obo/GO_0006949 denotes syncytium formation
T7 105-114 http://purl.obolibrary.org/obo/GO_0009058 denotes formation
T8 206-219 http://purl.obolibrary.org/obo/GO_0070085 denotes Glycosylation

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T27 118-122 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T41 187-196 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T4 95-114 http://purl.obolibrary.org/obo/GO_0006949 denotes syncytium formation
T5 105-114 http://purl.obolibrary.org/obo/GO_0009058 denotes formation
T6 206-219 http://purl.obolibrary.org/obo/GO_0070085 denotes Glycosylation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T4 95-114 http://purl.obolibrary.org/obo/GO_0006949 denotes syncytium formation
T5 105-114 http://purl.obolibrary.org/obo/GO_0009058 denotes formation
T6 206-219 http://purl.obolibrary.org/obo/GO_0070085 denotes Glycosylation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T48 20-132 Sentence denotes The constructed APMV-7 showed furin cleavage and increased replication and syncytium formation in cell cultures.
T49 133-197 Sentence denotes However, chicken exposed to the virus did not exhibit infection.
T50 199-219 Sentence denotes 3.1.2 Glycosylation

2_test

Id Subject Object Predicate Lexical cue
32413736-22258248-48112966 16-17 22258248 denotes 4
T44212 16-17 22258248 denotes 4