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PMC:7205724 / 4181-4402 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
142 143-148 Gene denotes furin Gene:5045
145 117-118 Gene denotes S Gene:43740568
146 106-116 Species denotes SARS-CoV 2 Tax:2697049
147 179-184 Species denotes human Tax:9606
148 185-195 Species denotes SARS-CoV 2 Tax:2697049
149 215-220 Species denotes human Tax:9606

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T22 27-38 Body_part denotes amino acids http://purl.org/sig/ont/fma/fma82739
T23 43-54 Body_part denotes nucleotides http://purl.org/sig/ont/fma/fma82740

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T33 106-114 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T34 185-193 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T40 80-82 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T41 87-89 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T42 87-89 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T43 131-132 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T44 179-184 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T45 215-220 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T23 27-38 Chemical denotes amino acids http://purl.obolibrary.org/obo/CHEBI_33709
T24 27-32 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T25 33-38 Chemical denotes acids http://purl.obolibrary.org/obo/CHEBI_37527
T26 43-54 Chemical denotes nucleotides http://purl.obolibrary.org/obo/CHEBI_36976
T27 87-89 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T13 158-162 http://purl.obolibrary.org/obo/BFO_0000029 denotes site

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T15 27-38 Chemical denotes amino acids http://purl.obolibrary.org/obo/CHEBI_33709
T16 43-54 Chemical denotes nucleotides http://purl.obolibrary.org/obo/CHEBI_36976

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T36 106-116 Species denotes SARS-CoV 2 NCBItxid:2697049
T37 179-193 Species denotes human SARS-CoV NCBItxid:694009

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
146 106-116 Species denotes SARS-CoV 2 Tax:2697049
145 117-118 Gene denotes S Gene:43740568
142 143-148 Gene denotes furin Gene:5045
147 179-184 Species denotes human Tax:9606
148 185-195 Species denotes SARS-CoV 2 Tax:2697049
149 215-220 Species denotes human Tax:9606

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T534 143-148 Protein denotes furin https://www.uniprot.org/uniprot/Q9UCZ5|https://www.uniprot.org/uniprot/Q6LBS3|https://www.uniprot.org/uniprot/Q6GTN6|https://www.uniprot.org/uniprot/Q28193|https://www.uniprot.org/uniprot/Q14336|https://www.uniprot.org/uniprot/P23377|https://www.uniprot.org/uniprot/P23188|https://www.uniprot.org/uniprot/P09958

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T673 2-11 NN denotes insertion
T674 12-18 VBN denotes formed
T675 19-21 IN denotes of
T676 22-26 CD denotes four
T677 27-32 NN denotes amino
T678 33-38 NNS denotes acids
T679 39-40 -LRB- denotes (
T680 40-42 CD denotes 12
T681 43-54 NNS denotes nucleotides
T682 54-55 -RRB- denotes )
T683 56-58 IN denotes at
T684 59-62 DT denotes the
T685 63-71 NN denotes boundary
T686 72-79 IN denotes between
T687 80-82 NN denotes S1
T688 83-86 CC denotes and
T689 87-89 NN denotes S2
T690 90-98 NNS denotes subunits
T691 99-101 IN denotes of
T692 102-105 DT denotes the
T693 106-114 NN denotes SARS-CoV
T694 115-116 CD denotes 2
T695 117-119 NNP denotes S.
T696 120-122 PRP denotes It
T697 123-130 VBZ denotes defines
T698 131-132 DT denotes a
T699 133-142 JJ denotes polybasic
T700 143-148 NN denotes furin
T701 149-157 NN denotes cleavage
T702 158-162 NN denotes site
T703 163-165 IN denotes of
T704 166-170 NN denotes RRAR
T705 171-174 IN denotes for
T706 175-178 DT denotes the
T707 179-184 JJ denotes human
T708 185-193 NN denotes SARS-CoV
T709 194-195 CD denotes 2
T710 196-200 WDT denotes that
T711 201-204 VBD denotes was
T712 205-211 JJ denotes absent
T713 212-214 IN denotes in
T714 215-220 JJ denotes human
R666 T673 T674 arg2Of insertion,formed
R667 T674 T675 arg1Of formed,of
R668 T678 T675 arg2Of acids,of
R669 T678 T676 arg1Of acids,four
R670 T678 T677 arg1Of acids,amino
R671 T678 T679 arg1Of acids,(
R672 T681 T679 arg2Of nucleotides,(
R673 T682 T679 arg3Of ),(
R674 T681 T680 arg1Of nucleotides,12
R675 T674 T683 arg1Of formed,at
R676 T685 T683 arg2Of boundary,at
R677 T685 T684 arg1Of boundary,the
R679 T690 T686 arg2Of subunits,between
R680 T690 T687 arg1Of subunits,S1
R681 T687 T688 arg1Of S1,and
R682 T689 T688 arg2Of S2,and
R683 T690 T689 arg1Of subunits,S2
R684 T690 T691 arg1Of subunits,of
R685 T695 T691 arg2Of S.,of
R686 T695 T692 arg1Of S.,the
R687 T695 T693 arg1Of S.,SARS-CoV
R688 T695 T694 arg1Of S.,2
R689 T696 T697 arg1Of It,defines
R690 T695 T697 arg2Of S.,defines
R691 T702 T698 arg1Of site,a
R692 T702 T699 arg1Of site,polybasic
R693 T702 T700 arg1Of site,furin
R694 T702 T701 arg1Of site,cleavage
R695 T702 T703 arg1Of site,of
R696 T704 T703 arg2Of RRAR,of
R697 T702 T705 arg1Of site,for
R698 T708 T705 arg2Of SARS-CoV,for
R699 T708 T706 arg1Of SARS-CoV,the
R700 T708 T707 arg1Of SARS-CoV,human
R701 T708 T709 arg1Of SARS-CoV,2
R702 T702 T710 arg1Of site,that
R703 T702 T711 arg1Of site,was
R704 T712 T711 arg2Of absent,was
R705 T702 T712 arg1Of site,absent
R706 T712 T713 arg1Of absent,in

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T22 27-38 Body_part denotes amino acids http://purl.org/sig/ont/fma/fma82739
T23 43-54 Body_part denotes nucleotides http://purl.org/sig/ont/fma/fma82740

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T33 106-116 Disease denotes SARS-CoV 2 http://purl.obolibrary.org/obo/MONDO_0100096
T34 185-195 Disease denotes SARS-CoV 2 http://purl.obolibrary.org/obo/MONDO_0100096