PMC:7205724 / 4140-4361 JSONTXT

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    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"142","span":{"begin":184,"end":189},"obj":"Gene"},{"id":"145","span":{"begin":158,"end":159},"obj":"Gene"},{"id":"146","span":{"begin":147,"end":157},"obj":"Species"}],"attributes":[{"id":"A142","pred":"tao:has_database_id","subj":"142","obj":"Gene:5045"},{"id":"A145","pred":"tao:has_database_id","subj":"145","obj":"Gene:43740568"},{"id":"A146","pred":"tao:has_database_id","subj":"146","obj":"Tax:2697049"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"d by sequence analysis, there is a residue insertion formed of four amino acids (12 nucleotides) at the boundary between S1 and S2 subunits of the SARS-CoV 2 S. It defines a polybasic furin cleavage site of RRAR for the h"}

    LitCovid-PD-FMA-UBERON

    {"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T22","span":{"begin":68,"end":79},"obj":"Body_part"},{"id":"T23","span":{"begin":84,"end":95},"obj":"Body_part"}],"attributes":[{"id":"A22","pred":"fma_id","subj":"T22","obj":"http://purl.org/sig/ont/fma/fma82739"},{"id":"A23","pred":"fma_id","subj":"T23","obj":"http://purl.org/sig/ont/fma/fma82740"}],"text":"d by sequence analysis, there is a residue insertion formed of four amino acids (12 nucleotides) at the boundary between S1 and S2 subunits of the SARS-CoV 2 S. It defines a polybasic furin cleavage site of RRAR for the h"}

    LitCovid-PD-MONDO

    {"project":"LitCovid-PD-MONDO","denotations":[{"id":"T33","span":{"begin":147,"end":155},"obj":"Disease"}],"attributes":[{"id":"A33","pred":"mondo_id","subj":"T33","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"d by sequence analysis, there is a residue insertion formed of four amino acids (12 nucleotides) at the boundary between S1 and S2 subunits of the SARS-CoV 2 S. It defines a polybasic furin cleavage site of RRAR for the h"}

    LitCovid-PD-CLO

    {"project":"LitCovid-PD-CLO","denotations":[{"id":"T39","span":{"begin":33,"end":34},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T40","span":{"begin":121,"end":123},"obj":"http://purl.obolibrary.org/obo/CLO_0050050"},{"id":"T41","span":{"begin":128,"end":130},"obj":"http://purl.obolibrary.org/obo/CLO_0008922"},{"id":"T42","span":{"begin":128,"end":130},"obj":"http://purl.obolibrary.org/obo/CLO_0050052"},{"id":"T43","span":{"begin":172,"end":173},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"d by sequence analysis, there is a residue insertion formed of four amino acids (12 nucleotides) at the boundary between S1 and S2 subunits of the SARS-CoV 2 S. It defines a polybasic furin cleavage site of RRAR for the h"}

    LitCovid-PD-CHEBI

    {"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T23","span":{"begin":68,"end":79},"obj":"Chemical"},{"id":"T24","span":{"begin":68,"end":73},"obj":"Chemical"},{"id":"T25","span":{"begin":74,"end":79},"obj":"Chemical"},{"id":"T26","span":{"begin":84,"end":95},"obj":"Chemical"},{"id":"T27","span":{"begin":128,"end":130},"obj":"Chemical"}],"attributes":[{"id":"A23","pred":"chebi_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/CHEBI_33709"},{"id":"A24","pred":"chebi_id","subj":"T24","obj":"http://purl.obolibrary.org/obo/CHEBI_46882"},{"id":"A25","pred":"chebi_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/CHEBI_37527"},{"id":"A26","pred":"chebi_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/CHEBI_36976"},{"id":"A27","pred":"chebi_id","subj":"T27","obj":"http://purl.obolibrary.org/obo/CHEBI_29387"}],"text":"d by sequence analysis, there is a residue insertion formed of four amino acids (12 nucleotides) at the boundary between S1 and S2 subunits of the SARS-CoV 2 S. It defines a polybasic furin cleavage site of RRAR for the h"}

    LitCovid-sample-PD-IDO

    {"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T13","span":{"begin":199,"end":203},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"}],"text":"d by sequence analysis, there is a residue insertion formed of four amino acids (12 nucleotides) at the boundary between S1 and S2 subunits of the SARS-CoV 2 S. It defines a polybasic furin cleavage site of RRAR for the h"}

    LitCovid-sample-CHEBI

    {"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T15","span":{"begin":68,"end":79},"obj":"Chemical"},{"id":"T16","span":{"begin":84,"end":95},"obj":"Chemical"}],"attributes":[{"id":"A16","pred":"chebi_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/CHEBI_36976"},{"id":"A15","pred":"chebi_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/CHEBI_33709"}],"text":"d by sequence analysis, there is a residue insertion formed of four amino acids (12 nucleotides) at the boundary between S1 and S2 subunits of the SARS-CoV 2 S. It defines a polybasic furin cleavage site of RRAR for the h"}

    LitCovid-sample-PD-NCBITaxon

    {"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T36","span":{"begin":147,"end":157},"obj":"Species"}],"attributes":[{"id":"A36","pred":"ncbi_taxonomy_id","subj":"T36","obj":"NCBItxid:2697049"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"d by sequence analysis, there is a residue insertion formed of four amino acids (12 nucleotides) at the boundary between S1 and S2 subunits of the SARS-CoV 2 S. It defines a polybasic furin cleavage site of RRAR for the h"}

    LitCovid-sample-Pubtator

    {"project":"LitCovid-sample-Pubtator","denotations":[{"id":"146","span":{"begin":147,"end":157},"obj":"Species"},{"id":"145","span":{"begin":158,"end":159},"obj":"Gene"},{"id":"142","span":{"begin":184,"end":189},"obj":"Gene"}],"attributes":[{"id":"A142","pred":"pubann:denotes","subj":"142","obj":"Gene:5045"},{"id":"A145","pred":"pubann:denotes","subj":"145","obj":"Gene:43740568"},{"id":"A146","pred":"pubann:denotes","subj":"146","obj":"Tax:2697049"}],"text":"d by sequence analysis, there is a residue insertion formed of four amino acids (12 nucleotides) at the boundary between S1 and S2 subunits of the SARS-CoV 2 S. It defines a polybasic furin cleavage site of RRAR for the h"}

    LitCovid-sample-UniProt

    {"project":"LitCovid-sample-UniProt","denotations":[{"id":"T534","span":{"begin":184,"end":189},"obj":"Protein"}],"attributes":[{"id":"A534","pred":"uniprot_id","subj":"T534","obj":"https://www.uniprot.org/uniprot/Q9UCZ5"},{"id":"A535","pred":"uniprot_id","subj":"T534","obj":"https://www.uniprot.org/uniprot/Q6LBS3"},{"id":"A536","pred":"uniprot_id","subj":"T534","obj":"https://www.uniprot.org/uniprot/Q6GTN6"},{"id":"A537","pred":"uniprot_id","subj":"T534","obj":"https://www.uniprot.org/uniprot/Q28193"},{"id":"A538","pred":"uniprot_id","subj":"T534","obj":"https://www.uniprot.org/uniprot/Q14336"},{"id":"A539","pred":"uniprot_id","subj":"T534","obj":"https://www.uniprot.org/uniprot/P23377"},{"id":"A540","pred":"uniprot_id","subj":"T534","obj":"https://www.uniprot.org/uniprot/P23188"},{"id":"A541","pred":"uniprot_id","subj":"T534","obj":"https://www.uniprot.org/uniprot/P09958"}],"text":"d by sequence analysis, there is a residue insertion formed of four amino acids (12 nucleotides) at the boundary between S1 and S2 subunits of the SARS-CoV 2 S. It defines a polybasic furin cleavage site of RRAR for the h"}

    LitCovid-sample-Enju

    {"project":"LitCovid-sample-Enju","denotations":[{"id":"T665","span":{"begin":2,"end":4},"obj":"IN"},{"id":"T666","span":{"begin":5,"end":13},"obj":"NN"},{"id":"T667","span":{"begin":14,"end":22},"obj":"NN"},{"id":"T668","span":{"begin":22,"end":23},"obj":"-COMMA-"},{"id":"T669","span":{"begin":24,"end":29},"obj":"EX"},{"id":"T670","span":{"begin":30,"end":32},"obj":"VBZ"},{"id":"T671","span":{"begin":33,"end":34},"obj":"DT"},{"id":"T672","span":{"begin":35,"end":42},"obj":"NN"},{"id":"T673","span":{"begin":43,"end":52},"obj":"NN"},{"id":"T674","span":{"begin":53,"end":59},"obj":"VBN"},{"id":"T675","span":{"begin":60,"end":62},"obj":"IN"},{"id":"T676","span":{"begin":63,"end":67},"obj":"CD"},{"id":"T677","span":{"begin":68,"end":73},"obj":"NN"},{"id":"T678","span":{"begin":74,"end":79},"obj":"NNS"},{"id":"T679","span":{"begin":80,"end":81},"obj":"-LRB-"},{"id":"T680","span":{"begin":81,"end":83},"obj":"CD"},{"id":"T681","span":{"begin":84,"end":95},"obj":"NNS"},{"id":"T682","span":{"begin":95,"end":96},"obj":"-RRB-"},{"id":"T683","span":{"begin":97,"end":99},"obj":"IN"},{"id":"T684","span":{"begin":100,"end":103},"obj":"DT"},{"id":"T685","span":{"begin":104,"end":112},"obj":"NN"},{"id":"T686","span":{"begin":113,"end":120},"obj":"IN"},{"id":"T687","span":{"begin":121,"end":123},"obj":"NN"},{"id":"T688","span":{"begin":124,"end":127},"obj":"CC"},{"id":"T689","span":{"begin":128,"end":130},"obj":"NN"},{"id":"T690","span":{"begin":131,"end":139},"obj":"NNS"},{"id":"T691","span":{"begin":140,"end":142},"obj":"IN"},{"id":"T692","span":{"begin":143,"end":146},"obj":"DT"},{"id":"T693","span":{"begin":147,"end":155},"obj":"NN"},{"id":"T694","span":{"begin":156,"end":157},"obj":"CD"},{"id":"T695","span":{"begin":158,"end":160},"obj":"NNP"},{"id":"T696","span":{"begin":161,"end":163},"obj":"PRP"},{"id":"T697","span":{"begin":164,"end":171},"obj":"VBZ"},{"id":"T698","span":{"begin":172,"end":173},"obj":"DT"},{"id":"T699","span":{"begin":174,"end":183},"obj":"JJ"},{"id":"T700","span":{"begin":184,"end":189},"obj":"NN"},{"id":"T701","span":{"begin":190,"end":198},"obj":"NN"},{"id":"T702","span":{"begin":199,"end":203},"obj":"NN"},{"id":"T703","span":{"begin":204,"end":206},"obj":"IN"},{"id":"T704","span":{"begin":207,"end":211},"obj":"NN"},{"id":"T705","span":{"begin":212,"end":215},"obj":"IN"},{"id":"T706","span":{"begin":216,"end":219},"obj":"DT"}],"relations":[{"id":"R659","pred":"arg2Of","subj":"T667","obj":"T665"},{"id":"R660","pred":"arg1Of","subj":"T667","obj":"T666"},{"id":"R661","pred":"arg1Of","subj":"T670","obj":"T668"},{"id":"R662","pred":"arg1Of","subj":"T669","obj":"T670"},{"id":"R663","pred":"arg2Of","subj":"T673","obj":"T670"},{"id":"R664","pred":"arg1Of","subj":"T673","obj":"T671"},{"id":"R665","pred":"arg1Of","subj":"T673","obj":"T672"},{"id":"R666","pred":"arg2Of","subj":"T673","obj":"T674"},{"id":"R667","pred":"arg1Of","subj":"T674","obj":"T675"},{"id":"R668","pred":"arg2Of","subj":"T678","obj":"T675"},{"id":"R669","pred":"arg1Of","subj":"T678","obj":"T676"},{"id":"R670","pred":"arg1Of","subj":"T678","obj":"T677"},{"id":"R671","pred":"arg1Of","subj":"T678","obj":"T679"},{"id":"R672","pred":"arg2Of","subj":"T681","obj":"T679"},{"id":"R673","pred":"arg3Of","subj":"T682","obj":"T679"},{"id":"R674","pred":"arg1Of","subj":"T681","obj":"T680"},{"id":"R675","pred":"arg1Of","subj":"T674","obj":"T683"},{"id":"R676","pred":"arg2Of","subj":"T685","obj":"T683"},{"id":"R677","pred":"arg1Of","subj":"T685","obj":"T684"},{"id":"R678","pred":"arg1Of","subj":"T670","obj":"T686"},{"id":"R679","pred":"arg2Of","subj":"T690","obj":"T686"},{"id":"R680","pred":"arg1Of","subj":"T690","obj":"T687"},{"id":"R681","pred":"arg1Of","subj":"T687","obj":"T688"},{"id":"R682","pred":"arg2Of","subj":"T689","obj":"T688"},{"id":"R683","pred":"arg1Of","subj":"T690","obj":"T689"},{"id":"R684","pred":"arg1Of","subj":"T690","obj":"T691"},{"id":"R685","pred":"arg2Of","subj":"T695","obj":"T691"},{"id":"R686","pred":"arg1Of","subj":"T695","obj":"T692"},{"id":"R687","pred":"arg1Of","subj":"T695","obj":"T693"},{"id":"R688","pred":"arg1Of","subj":"T695","obj":"T694"},{"id":"R689","pred":"arg1Of","subj":"T696","obj":"T697"},{"id":"R690","pred":"arg2Of","subj":"T695","obj":"T697"},{"id":"R691","pred":"arg1Of","subj":"T702","obj":"T698"},{"id":"R692","pred":"arg1Of","subj":"T702","obj":"T699"},{"id":"R693","pred":"arg1Of","subj":"T702","obj":"T700"},{"id":"R694","pred":"arg1Of","subj":"T702","obj":"T701"},{"id":"R695","pred":"arg1Of","subj":"T702","obj":"T703"},{"id":"R696","pred":"arg2Of","subj":"T704","obj":"T703"},{"id":"R697","pred":"arg1Of","subj":"T702","obj":"T705"}],"text":"d by sequence analysis, there is a residue insertion formed of four amino acids (12 nucleotides) at the boundary between S1 and S2 subunits of the SARS-CoV 2 S. It defines a polybasic furin cleavage site of RRAR for the h"}

    LitCovid-sample-PD-FMA

    {"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T22","span":{"begin":68,"end":79},"obj":"Body_part"},{"id":"T23","span":{"begin":84,"end":95},"obj":"Body_part"}],"attributes":[{"id":"A23","pred":"fma_id","subj":"T23","obj":"http://purl.org/sig/ont/fma/fma82740"},{"id":"A22","pred":"fma_id","subj":"T22","obj":"http://purl.org/sig/ont/fma/fma82739"}],"text":"d by sequence analysis, there is a residue insertion formed of four amino acids (12 nucleotides) at the boundary between S1 and S2 subunits of the SARS-CoV 2 S. It defines a polybasic furin cleavage site of RRAR for the h"}

    LitCovid-sample-PD-MONDO

    {"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T33","span":{"begin":147,"end":157},"obj":"Disease"}],"attributes":[{"id":"A33","pred":"mondo_id","subj":"T33","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"d by sequence analysis, there is a residue insertion formed of four amino acids (12 nucleotides) at the boundary between S1 and S2 subunits of the SARS-CoV 2 S. It defines a polybasic furin cleavage site of RRAR for the h"}