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PMC:7205724 / 20292-20478 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
685 23-32 Species denotes SARS-CoV2 Tax:2697049
686 37-45 Species denotes SARS-CoV Tax:694009

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T148 122-130 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T149 23-27 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T150 37-45 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T237 140-147 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T166 122-130 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T94 140-147 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T108 122-130 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T192 23-32 Species denotes SARS-CoV2 NCBItxid:2697049
T193 37-45 Species denotes SARS-CoV NCBItxid:694009
T194 140-147 Species denotes viruses NCBItxid:10239

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T163 0-186 Sentence denotes The difference between SARS-CoV2 and SARS-CoV in response to type I IFN treatment may be due to differences in structural proteins of these viruses, including NSP3, ORF3b, and ORF6 [25].

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
685 23-32 Species denotes SARS-CoV2 Tax:2697049
686 37-45 Species denotes SARS-CoV Tax:694009

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T1989 111-130 Protein denotes structural proteins https://www.uniprot.org/uniprot/Q6LEG6|https://www.uniprot.org/uniprot/Q04766|https://www.uniprot.org/uniprot/Q04765
T1992 159-163 Protein denotes NSP3 https://www.uniprot.org/uniprot/Q9QNA7|https://www.uniprot.org/uniprot/Q9PY95|https://www.uniprot.org/uniprot/Q9ICB2|https://www.uniprot.org/uniprot/Q91ME7|https://www.uniprot.org/uniprot/Q8UZL8|https://www.uniprot.org/uniprot/Q8B6X8|https://www.uniprot.org/uniprot/Q8B6X7|https://www.uniprot.org/uniprot/Q86504|https://www.uniprot.org/uniprot/Q86196|https://www.uniprot.org/uniprot/Q85014|https://www.uniprot.org/uniprot/Q82054|https://www.uniprot.org/uniprot/Q82053|https://www.uniprot.org/uniprot/Q82052|https://www.uniprot.org/uniprot/Q82051|https://www.uniprot.org/uniprot/Q82050|https://www.uniprot.org/uniprot/Q82049|https://www.uniprot.org/uniprot/Q65701|https://www.uniprot.org/uniprot/Q5Y9A9|https://www.uniprot.org/uniprot/Q5K037|https://www.uniprot.org/uniprot/Q45UF3|https://www.uniprot.org/uniprot/Q3ZK63|https://www.uniprot.org/uniprot/Q27PP2|https://www.uniprot.org/uniprot/Q0H8C1|https://www.uniprot.org/uniprot/Q00721|https://www.uniprot.org/uniprot/P34717|https://www.uniprot.org/uniprot/P27586|https://www.uniprot.org/uniprot/P04514|https://www.uniprot.org/uniprot/P03536|https://www.uniprot.org/uniprot/B3SRX7|https://www.uniprot.org/uniprot/B3SRW9|https://www.uniprot.org/uniprot/B3SRV3|https://www.uniprot.org/uniprot/B3SRU5|https://www.uniprot.org/uniprot/B3SRS9|https://www.uniprot.org/uniprot/B3SRS1|https://www.uniprot.org/uniprot/B3SRR3|https://www.uniprot.org/uniprot/B3SRQ5|https://www.uniprot.org/uniprot/B2BRG4|https://www.uniprot.org/uniprot/A4ZCW4|https://www.uniprot.org/uniprot/A3DSK9|https://www.uniprot.org/uniprot/A2T3N5|https://www.uniprot.org/uniprot/A1YTU9
T2033 176-180 Protein denotes ORF6 https://www.uniprot.org/uniprot/P51707|https://www.uniprot.org/uniprot/P42541|https://www.uniprot.org/uniprot/P0DTC6

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T46096 0-3 DT denotes The
T71403 4-14 NN denotes difference
T17651 15-22 IN denotes between
T77482 23-32 NN denotes SARS-CoV2
T6733 33-36 CC denotes and
T6622 37-45 NN denotes SARS-CoV
T66580 46-48 IN denotes in
T74975 49-57 NN denotes response
T1853 58-60 TO denotes to
T87892 61-65 NN denotes type
T83308 66-67 CD denotes I
T81934 68-71 NN denotes IFN
T42652 72-81 NN denotes treatment
T91527 82-85 MD denotes may
T42839 86-88 VB denotes be
T98810 89-92 JJ denotes due
T31126 93-95 TO denotes to
T23141 96-107 NNS denotes differences
T45488 108-110 IN denotes in
T39296 111-121 JJ denotes structural
T12723 122-130 NNS denotes proteins
T40582 131-133 IN denotes of
T48639 134-139 DT denotes these
T20513 140-147 NNS denotes viruses
T37519 147-148 -COMMA- denotes ,
T18237 149-158 VBG denotes including
T17094 159-163 NN denotes NSP3
T86991 163-164 -COMMA- denotes ,
T14810 165-170 NN denotes ORF3b
T9269 170-171 -COMMA- denotes ,
T18064 172-175 CC denotes and
T40695 176-180 NN denotes ORF6
T59456 181-182 -LRB- denotes [
T34145 182-184 CD denotes 25
T98303 184-185 -RRB- denotes ]
R51347 T71403 T46096 arg1Of difference,The
R4839 T71403 T17651 arg1Of difference,between
R32316 T6733 T17651 arg2Of and,between
R84108 T77482 T6733 arg1Of SARS-CoV2,and
R18562 T6622 T6733 arg2Of SARS-CoV,and
R2587 T6733 T66580 arg1Of and,in
R24267 T74975 T66580 arg2Of response,in
R82007 T74975 T1853 arg1Of response,to
R35751 T42652 T1853 arg2Of treatment,to
R70872 T42652 T87892 arg1Of treatment,type
R16675 T42652 T83308 arg1Of treatment,I
R93961 T42652 T81934 arg1Of treatment,IFN
R17630 T71403 T91527 arg1Of difference,may
R18684 T42839 T91527 arg2Of be,may
R22926 T71403 T42839 arg1Of difference,be
R74216 T31126 T42839 arg2Of to,be
R18552 T31126 T98810 arg1Of to,due
R78491 T71403 T31126 arg1Of difference,to
R99441 T23141 T31126 arg2Of differences,to
R87106 T23141 T45488 arg1Of differences,in
R95354 T12723 T45488 arg2Of proteins,in
R28120 T12723 T39296 arg1Of proteins,structural
R78454 T12723 T40582 arg1Of proteins,of
R26738 T20513 T40582 arg2Of viruses,of
R35077 T20513 T48639 arg1Of viruses,these
R70559 T12723 T37519 arg1Of proteins,","
R50810 T12723 T18237 arg1Of proteins,including
R8147 T18064 T18237 arg2Of and,including
R72409 T17094 T86991 arg1Of NSP3,","
R12802 T14810 T86991 arg2Of ORF3b,","
R29123 T18064 T9269 arg1Of and,","
R68379 T86991 T18064 arg1Of ",",and
R4978 T40695 T18064 arg2Of ORF6,and
R22872 T18064 T59456 arg1Of and,[
R60583 T34145 T59456 arg2Of 25,[
R50503 T98303 T59456 arg3Of ],[

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T29 49-71 http://purl.obolibrary.org/obo/GO_0034340 denotes response to type I IFN

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T148 122-130 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T144 23-32 Disease denotes SARS-CoV2 http://purl.obolibrary.org/obo/MONDO_0100096
T145 37-45 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T25 49-71 http://purl.obolibrary.org/obo/GO_0034340 denotes response to type I IFN

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T25 49-71 http://purl.obolibrary.org/obo/GO_0034340 denotes response to type I IFN

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T163 0-186 Sentence denotes The difference between SARS-CoV2 and SARS-CoV in response to type I IFN treatment may be due to differences in structural proteins of these viruses, including NSP3, ORF3b, and ORF6 [25].