PMC:7205724 / 170-596
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 3 | 82-89 | Species | denotes | patient | Tax:9606 |
| 5 | 161-169 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 7 | 244-252 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 10 | 257-260 | Gene | denotes | IL6 | Gene:3569 |
| 11 | 329-337 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 17 | 363-366 | Gene | denotes | IL6 | Gene:3569 |
| 18 | 422-425 | Gene | denotes | IL6 | Gene:3569 |
| 19 | 390-398 | Species | denotes | patients | Tax:9606 |
| 20 | 342-353 | Chemical | denotes | Tocilizumab | MESH:C502936 |
| 21 | 404-412 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T2 | 161-169 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T3 | 244-252 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T4 | 329-337 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T5 | 404-412 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T3 | 51-66 | Chemical | denotes | corticosteroids | http://purl.obolibrary.org/obo/CHEBI_50858 |
| T4 | 114-129 | Chemical | denotes | corticosteroids | http://purl.obolibrary.org/obo/CHEBI_50858 |
| T5 | 224-239 | Chemical | denotes | corticosteroids | http://purl.obolibrary.org/obo/CHEBI_50858 |
LitCovid-sample-MedDRA
| Id | Subject | Object | Predicate | Lexical cue | meddra_id |
|---|---|---|---|---|---|
| T2 | 300-310 | http://purl.bioontology.org/ontology/MEDDRA/10022891 | denotes | viral load | http://purl.bioontology.org/ontology/MEDDRA/10062178 |
LitCovid-sample-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T2 | 51-66 | Chemical | denotes | corticosteroids | http://purl.obolibrary.org/obo/CHEBI_50858 |
| T3 | 114-129 | Chemical | denotes | corticosteroids | http://purl.obolibrary.org/obo/CHEBI_50858 |
| T4 | 224-239 | Chemical | denotes | corticosteroids | http://purl.obolibrary.org/obo/CHEBI_50858 |
LitCovid-sample-PD-NCBITaxon
| Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
|---|---|---|---|---|---|
| T2 | 161-169 | Species | denotes | COVID-19 | NCBItxid:2697049 |
| T3 | 244-252 | Species | denotes | COVID-19 | NCBItxid:2697049 |
| T4 | 329-337 | Species | denotes | COVID-19 | NCBItxid:2697049 |
| T5 | 404-412 | Species | denotes | COVID-19 | NCBItxid:2697049 |
LitCovid-sample-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 0-10 | Sentence | denotes | Highlights |
| T5 | 11-99 | Sentence | denotes | • IVIG, combined with moderate-dose of corticosteroids, might improve patient outcomes. |
| T6 | 100-170 | Sentence | denotes | • The use of corticosteroids might accelerate recovery from COVID-19. |
| T7 | 171-253 | Sentence | denotes | • No controlled clinical trials exist on the use of corticosteroids for COVID-19. |
| T8 | 254-338 | Sentence | denotes | • IL6 correlates with severity, criticality, viral load, and prognosis of COVID-19. |
| T9 | 339-426 | Sentence | denotes | • Tocilizumab, an anti-IL6, can confer benefit in patients with COVID-19 and high IL6. |
LitCovid-sample-Pubtator
| Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
|---|---|---|---|---|---|
| 3 | 82-89 | Species | denotes | patient | Tax:9606 |
| 5 | 161-169 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 7 | 244-252 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 10 | 257-260 | Gene | denotes | IL6 | Gene:3569 |
| 11 | 329-337 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 20 | 342-353 | Chemical | denotes | Tocilizumab | MESH:C502936 |
| 17 | 363-366 | Gene | denotes | IL6 | Gene:3569 |
| 19 | 390-398 | Species | denotes | patients | Tax:9606 |
| 21 | 404-412 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 18 | 422-425 | Gene | denotes | IL6 | Gene:3569 |
LitCovid-sample-UniProt
| Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
|---|---|---|---|---|---|
| T1 | 257-260 | Protein | denotes | IL6 | https://www.uniprot.org/uniprot/Q9XT80|https://www.uniprot.org/uniprot/Q9UCU4|https://www.uniprot.org/uniprot/Q9UCU3|https://www.uniprot.org/uniprot/Q9UCU2|https://www.uniprot.org/uniprot/Q9MZR1|https://www.uniprot.org/uniprot/Q9MYZ7|https://www.uniprot.org/uniprot/Q95KN6|https://www.uniprot.org/uniprot/Q95181|https://www.uniprot.org/uniprot/Q90YI0|https://www.uniprot.org/uniprot/Q8MKH0|https://www.uniprot.org/uniprot/Q8BN26|https://www.uniprot.org/uniprot/Q865X6|https://www.uniprot.org/uniprot/Q865W7|https://www.uniprot.org/uniprot/Q6V919|https://www.uniprot.org/uniprot/Q6L6X6|https://www.uniprot.org/uniprot/Q5I6E3|https://www.uniprot.org/uniprot/Q3UCQ0|https://www.uniprot.org/uniprot/Q2MH06|https://www.uniprot.org/uniprot/Q28819|https://www.uniprot.org/uniprot/Q28747|https://www.uniprot.org/uniprot/Q28319|https://www.uniprot.org/uniprot/Q25BC2|https://www.uniprot.org/uniprot/Q0PW36|https://www.uniprot.org/uniprot/Q0GGL7|https://www.uniprot.org/uniprot/Q08DT2|https://www.uniprot.org/uniprot/P79341|https://www.uniprot.org/uniprot/P51494|https://www.uniprot.org/uniprot/P46650|https://www.uniprot.org/uniprot/P41693|https://www.uniprot.org/uniprot/P41683|https://www.uniprot.org/uniprot/P41323|https://www.uniprot.org/uniprot/P29455|https://www.uniprot.org/uniprot/P26893|https://www.uniprot.org/uniprot/P26892|https://www.uniprot.org/uniprot/P20607|https://www.uniprot.org/uniprot/P08505|https://www.uniprot.org/uniprot/P05231|https://www.uniprot.org/uniprot/O46568|https://www.uniprot.org/uniprot/O35736|https://www.uniprot.org/uniprot/O19007|https://www.uniprot.org/uniprot/B6CKP4|https://www.uniprot.org/uniprot/A9QWQ9|https://www.uniprot.org/uniprot/A3FBE9|https://www.uniprot.org/uniprot/A0S0B0 |
| T45 | 363-366 | Protein | denotes | IL6 | https://www.uniprot.org/uniprot/Q9XT80|https://www.uniprot.org/uniprot/Q9UCU4|https://www.uniprot.org/uniprot/Q9UCU3|https://www.uniprot.org/uniprot/Q9UCU2|https://www.uniprot.org/uniprot/Q9MZR1|https://www.uniprot.org/uniprot/Q9MYZ7|https://www.uniprot.org/uniprot/Q95KN6|https://www.uniprot.org/uniprot/Q95181|https://www.uniprot.org/uniprot/Q90YI0|https://www.uniprot.org/uniprot/Q8MKH0|https://www.uniprot.org/uniprot/Q8BN26|https://www.uniprot.org/uniprot/Q865X6|https://www.uniprot.org/uniprot/Q865W7|https://www.uniprot.org/uniprot/Q6V919|https://www.uniprot.org/uniprot/Q6L6X6|https://www.uniprot.org/uniprot/Q5I6E3|https://www.uniprot.org/uniprot/Q3UCQ0|https://www.uniprot.org/uniprot/Q2MH06|https://www.uniprot.org/uniprot/Q28819|https://www.uniprot.org/uniprot/Q28747|https://www.uniprot.org/uniprot/Q28319|https://www.uniprot.org/uniprot/Q25BC2|https://www.uniprot.org/uniprot/Q0PW36|https://www.uniprot.org/uniprot/Q0GGL7|https://www.uniprot.org/uniprot/Q08DT2|https://www.uniprot.org/uniprot/P79341|https://www.uniprot.org/uniprot/P51494|https://www.uniprot.org/uniprot/P46650|https://www.uniprot.org/uniprot/P41693|https://www.uniprot.org/uniprot/P41683|https://www.uniprot.org/uniprot/P41323|https://www.uniprot.org/uniprot/P29455|https://www.uniprot.org/uniprot/P26893|https://www.uniprot.org/uniprot/P26892|https://www.uniprot.org/uniprot/P20607|https://www.uniprot.org/uniprot/P08505|https://www.uniprot.org/uniprot/P05231|https://www.uniprot.org/uniprot/O46568|https://www.uniprot.org/uniprot/O35736|https://www.uniprot.org/uniprot/O19007|https://www.uniprot.org/uniprot/B6CKP4|https://www.uniprot.org/uniprot/A9QWQ9|https://www.uniprot.org/uniprot/A3FBE9|https://www.uniprot.org/uniprot/A0S0B0 |
| T89 | 422-425 | Protein | denotes | IL6 | https://www.uniprot.org/uniprot/Q9XT80|https://www.uniprot.org/uniprot/Q9UCU4|https://www.uniprot.org/uniprot/Q9UCU3|https://www.uniprot.org/uniprot/Q9UCU2|https://www.uniprot.org/uniprot/Q9MZR1|https://www.uniprot.org/uniprot/Q9MYZ7|https://www.uniprot.org/uniprot/Q95KN6|https://www.uniprot.org/uniprot/Q95181|https://www.uniprot.org/uniprot/Q90YI0|https://www.uniprot.org/uniprot/Q8MKH0|https://www.uniprot.org/uniprot/Q8BN26|https://www.uniprot.org/uniprot/Q865X6|https://www.uniprot.org/uniprot/Q865W7|https://www.uniprot.org/uniprot/Q6V919|https://www.uniprot.org/uniprot/Q6L6X6|https://www.uniprot.org/uniprot/Q5I6E3|https://www.uniprot.org/uniprot/Q3UCQ0|https://www.uniprot.org/uniprot/Q2MH06|https://www.uniprot.org/uniprot/Q28819|https://www.uniprot.org/uniprot/Q28747|https://www.uniprot.org/uniprot/Q28319|https://www.uniprot.org/uniprot/Q25BC2|https://www.uniprot.org/uniprot/Q0PW36|https://www.uniprot.org/uniprot/Q0GGL7|https://www.uniprot.org/uniprot/Q08DT2|https://www.uniprot.org/uniprot/P79341|https://www.uniprot.org/uniprot/P51494|https://www.uniprot.org/uniprot/P46650|https://www.uniprot.org/uniprot/P41693|https://www.uniprot.org/uniprot/P41683|https://www.uniprot.org/uniprot/P41323|https://www.uniprot.org/uniprot/P29455|https://www.uniprot.org/uniprot/P26893|https://www.uniprot.org/uniprot/P26892|https://www.uniprot.org/uniprot/P20607|https://www.uniprot.org/uniprot/P08505|https://www.uniprot.org/uniprot/P05231|https://www.uniprot.org/uniprot/O46568|https://www.uniprot.org/uniprot/O35736|https://www.uniprot.org/uniprot/O19007|https://www.uniprot.org/uniprot/B6CKP4|https://www.uniprot.org/uniprot/A9QWQ9|https://www.uniprot.org/uniprot/A3FBE9|https://www.uniprot.org/uniprot/A0S0B0 |
LitCovid-sample-Enju
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T23 | 0-10 | NNS | denotes | Highlights |
| T24 | 11-12 | IN | denotes | • |
| T25 | 14-18 | NNP | denotes | IVIG |
| T26 | 18-19 | -COMMA- | denotes | , |
| T27 | 20-28 | VBN | denotes | combined |
| T28 | 29-33 | IN | denotes | with |
| T29 | 34-47 | NN | denotes | moderate-dose |
| T30 | 48-50 | IN | denotes | of |
| T31 | 51-66 | NNS | denotes | corticosteroids |
| T32 | 66-67 | -COMMA- | denotes | , |
| T33 | 68-73 | MD | denotes | might |
| T34 | 74-81 | VB | denotes | improve |
| T35 | 82-89 | NN | denotes | patient |
| T36 | 90-98 | NNS | denotes | outcomes |
| T37 | 100-101 | PDT | denotes | • |
| T38 | 103-106 | DT | denotes | The |
| T39 | 107-110 | NN | denotes | use |
| T40 | 111-113 | IN | denotes | of |
| T41 | 114-129 | NNS | denotes | corticosteroids |
| T42 | 130-135 | MD | denotes | might |
| T43 | 136-146 | VB | denotes | accelerate |
| T44 | 147-155 | NN | denotes | recovery |
| T45 | 156-160 | IN | denotes | from |
| T46 | 161-169 | NN | denotes | COVID-19 |
| T47 | 171-172 | PDT | denotes | • |
| T48 | 174-176 | DT | denotes | No |
| T49 | 177-187 | VBN | denotes | controlled |
| T50 | 188-196 | JJ | denotes | clinical |
| T51 | 197-203 | NNS | denotes | trials |
| T52 | 204-209 | VBP | denotes | exist |
| T53 | 210-212 | IN | denotes | on |
| T54 | 213-216 | DT | denotes | the |
| T55 | 217-220 | NN | denotes | use |
| T56 | 221-223 | IN | denotes | of |
| T57 | 224-239 | NNS | denotes | corticosteroids |
| T58 | 240-243 | IN | denotes | for |
| T59 | 244-252 | NN | denotes | COVID-19 |
| T60 | 254-255 | LS | denotes | • |
| T61 | 257-260 | NN | denotes | IL6 |
| T62 | 261-271 | VBZ | denotes | correlates |
| T63 | 272-276 | IN | denotes | with |
| T64 | 277-285 | NN | denotes | severity |
| T65 | 285-286 | -COMMA- | denotes | , |
| T66 | 287-298 | NN | denotes | criticality |
| T67 | 298-299 | -COMMA- | denotes | , |
| T68 | 300-305 | JJ | denotes | viral |
| T69 | 306-310 | NN | denotes | load |
| T70 | 310-311 | -COMMA- | denotes | , |
| T71 | 312-315 | CC | denotes | and |
| T72 | 316-325 | NN | denotes | prognosis |
| T73 | 326-328 | IN | denotes | of |
| T74 | 329-337 | NN | denotes | COVID-19 |
| T75 | 339-340 | IN | denotes | • |
| T76 | 342-353 | NNP | denotes | Tocilizumab |
| T77 | 353-354 | -COMMA- | denotes | , |
| T78 | 355-357 | DT | denotes | an |
| T79 | 358-366 | NN | denotes | anti-IL6 |
| T80 | 366-367 | -COMMA- | denotes | , |
| T81 | 368-371 | MD | denotes | can |
| T82 | 372-378 | VB | denotes | confer |
| T83 | 379-386 | NN | denotes | benefit |
| T84 | 387-389 | IN | denotes | in |
| T85 | 390-398 | NNS | denotes | patients |
| T86 | 399-403 | IN | denotes | with |
| T87 | 404-412 | NN | denotes | COVID-19 |
| T88 | 413-416 | CC | denotes | and |
| T89 | 417-421 | JJ | denotes | high |
| T90 | 422-425 | NN | denotes | IL6 |
| R20 | T25 | T24 | arg1Of | IVIG,• |
| R21 | T25 | T26 | arg1Of | IVIG,"," |
| R22 | T25 | T27 | arg2Of | IVIG,combined |
| R23 | T27 | T28 | arg1Of | combined,with |
| R24 | T29 | T28 | arg2Of | moderate-dose,with |
| R25 | T29 | T30 | arg1Of | moderate-dose,of |
| R26 | T31 | T30 | arg2Of | corticosteroids,of |
| R27 | T34 | T32 | arg1Of | improve,"," |
| R28 | T25 | T33 | arg1Of | IVIG,might |
| R29 | T34 | T33 | arg2Of | improve,might |
| R30 | T25 | T34 | arg1Of | IVIG,improve |
| R31 | T36 | T34 | arg2Of | outcomes,improve |
| R32 | T36 | T35 | arg1Of | outcomes,patient |
| R33 | T39 | T37 | arg1Of | use,• |
| R34 | T39 | T38 | arg1Of | use,The |
| R35 | T39 | T40 | arg1Of | use,of |
| R36 | T41 | T40 | arg2Of | corticosteroids,of |
| R37 | T39 | T42 | arg1Of | use,might |
| R38 | T43 | T42 | arg2Of | accelerate,might |
| R39 | T39 | T43 | arg1Of | use,accelerate |
| R40 | T44 | T43 | arg2Of | recovery,accelerate |
| R41 | T44 | T45 | arg1Of | recovery,from |
| R42 | T46 | T45 | arg2Of | COVID-19,from |
| R43 | T51 | T47 | arg1Of | trials,• |
| R44 | T51 | T48 | arg1Of | trials,No |
| R45 | T51 | T49 | arg2Of | trials,controlled |
| R46 | T51 | T50 | arg1Of | trials,clinical |
| R47 | T51 | T52 | arg1Of | trials,exist |
| R48 | T52 | T53 | arg1Of | exist,on |
| R49 | T55 | T53 | arg2Of | use,on |
| R50 | T55 | T54 | arg1Of | use,the |
| R51 | T55 | T56 | arg1Of | use,of |
| R52 | T57 | T56 | arg2Of | corticosteroids,of |
| R53 | T55 | T58 | arg1Of | use,for |
| R54 | T59 | T58 | arg2Of | COVID-19,for |
| R55 | T62 | T60 | arg1Of | correlates,• |
| R56 | T61 | T62 | arg1Of | IL6,correlates |
| R57 | T62 | T63 | arg1Of | correlates,with |
| R58 | T71 | T63 | arg2Of | and,with |
| R59 | T64 | T65 | arg1Of | severity,"," |
| R60 | T66 | T65 | arg2Of | criticality,"," |
| R61 | T65 | T67 | arg1Of | ",","," |
| R62 | T69 | T67 | arg2Of | load,"," |
| R63 | T69 | T68 | arg1Of | load,viral |
| R64 | T71 | T70 | arg1Of | and,"," |
| R65 | T67 | T71 | arg1Of | ",",and |
| R66 | T72 | T71 | arg2Of | prognosis,and |
| R67 | T72 | T73 | arg1Of | prognosis,of |
| R68 | T74 | T73 | arg2Of | COVID-19,of |
| R69 | T82 | T75 | arg1Of | confer,• |
| R70 | T76 | T77 | arg1Of | Tocilizumab,"," |
| R71 | T79 | T77 | arg2Of | anti-IL6,"," |
| R72 | T79 | T78 | arg1Of | anti-IL6,an |
| R73 | T82 | T80 | arg1Of | confer,"," |
| R74 | T76 | T81 | arg1Of | Tocilizumab,can |
| R75 | T82 | T81 | arg2Of | confer,can |
| R76 | T76 | T82 | arg1Of | Tocilizumab,confer |
| R77 | T83 | T82 | arg2Of | benefit,confer |
| R78 | T82 | T84 | arg1Of | confer,in |
| R79 | T85 | T84 | arg2Of | patients,in |
| R80 | T85 | T86 | arg1Of | patients,with |
| R81 | T88 | T86 | arg2Of | and,with |
| R82 | T87 | T88 | arg1Of | COVID-19,and |
| R83 | T90 | T88 | arg2Of | IL6,and |
| R84 | T90 | T89 | arg1Of | IL6,high |
LitCovid-sample-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T2 | 161-169 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T3 | 244-252 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T4 | 329-337 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T5 | 404-412 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 0-10 | Sentence | denotes | Highlights |
| T5 | 11-99 | Sentence | denotes | • IVIG, combined with moderate-dose of corticosteroids, might improve patient outcomes. |
| T6 | 100-170 | Sentence | denotes | • The use of corticosteroids might accelerate recovery from COVID-19. |
| T7 | 171-253 | Sentence | denotes | • No controlled clinical trials exist on the use of corticosteroids for COVID-19. |
| T8 | 254-338 | Sentence | denotes | • IL6 correlates with severity, criticality, viral load, and prognosis of COVID-19. |
| T9 | 339-426 | Sentence | denotes | • Tocilizumab, an anti-IL6, can confer benefit in patients with COVID-19 and high IL6. |